Protein–RNA interactions for Protein: P04183

TK1, Thymidine kinase, cytosolic, humanhuman

Predictions only

Length 234 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TK1P04183 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.98■□□□□ 0.31
TK1P04183 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TK1P04183 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.98■□□□□ 0.31
TK1P04183 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TK1P04183 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.98■□□□□ 0.31
TK1P04183 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TK1P04183 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TK1P04183 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.97■□□□□ 0.31
TK1P04183 KRT8P36-201ENST00000489121 1440 ntBASIC16.97■□□□□ 0.31
TK1P04183 AC087633.2-202ENST00000565166 1439 ntBASIC16.97■□□□□ 0.31
TK1P04183 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.97■□□□□ 0.31
TK1P04183 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.97■□□□□ 0.31
TK1P04183 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.97■□□□□ 0.31
TK1P04183 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 MCRIP2P1-201ENST00000394346 511 ntBASIC16.97■□□□□ 0.31
TK1P04183 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.97■□□□□ 0.31
TK1P04183 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.97■□□□□ 0.31
TK1P04183 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.97■□□□□ 0.31
TK1P04183 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.97■□□□□ 0.31
TK1P04183 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.97■□□□□ 0.31
TK1P04183 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TK1P04183 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.96■□□□□ 0.31
TK1P04183 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TK1P04183 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.96■□□□□ 0.31
TK1P04183 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TK1P04183 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.96■□□□□ 0.31
TK1P04183 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.96■□□□□ 0.31
TK1P04183 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TK1P04183 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TK1P04183 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.96■□□□□ 0.31
TK1P04183 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TK1P04183 RAP2CP1-201ENST00000605103 478 ntBASIC16.96■□□□□ 0.31
TK1P04183 AL356652.1-201ENST00000615962 565 ntBASIC16.96■□□□□ 0.31
TK1P04183 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TK1P04183 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TK1P04183 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TK1P04183 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TK1P04183 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.96■□□□□ 0.3
TK1P04183 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.96■□□□□ 0.3
TK1P04183 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TK1P04183 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TK1P04183 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.3
TK1P04183 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TK1P04183 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.95■□□□□ 0.3
TK1P04183 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.95■□□□□ 0.3
TK1P04183 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
TK1P04183 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.95■□□□□ 0.3
TK1P04183 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.95■□□□□ 0.3
TK1P04183 TCF3P1-201ENST00000423021 1937 ntBASIC16.95■□□□□ 0.3
TK1P04183 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.95■□□□□ 0.3
TK1P04183 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.95■□□□□ 0.3
TK1P04183 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.95■□□□□ 0.3
TK1P04183 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TK1P04183 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TK1P04183 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.94■□□□□ 0.3
TK1P04183 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.94■□□□□ 0.3
TK1P04183 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TK1P04183 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TK1P04183 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TK1P04183 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.94■□□□□ 0.3
TK1P04183 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TK1P04183 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TK1P04183 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TK1P04183 MIR663A-201ENST00000385250 93 ntBASIC16.94■□□□□ 0.3
TK1P04183 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.94■□□□□ 0.3
TK1P04183 AL512625.2-201ENST00000417533 625 ntBASIC16.94■□□□□ 0.3
TK1P04183 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TK1P04183 AC133552.2-202ENST00000575694 574 ntBASIC16.94■□□□□ 0.3
TK1P04183 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TK1P04183 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TK1P04183 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TK1P04183 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TK1P04183 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms