Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 CLCN6-205ENST00000376492 1062 ntTSL 1 (best)14.57□□□□□ -0.086e-6■■■□□ 15
DKC1O60832 TFR2-206ENST00000465294 2763 ntTSL 214.27□□□□□ -0.124e-16■■■□□ 15
DKC1O60832 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.136e-6■■■□□ 15
DKC1O60832 ADGRD1-207ENST00000537489 565 ntTSL 414.17□□□□□ -0.146e-6■■■□□ 15
DKC1O60832 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.184e-16■■■□□ 15
DKC1O60832 CLCN6-206ENST00000376496 2922 ntTSL 5 BASIC13.78□□□□□ -0.26e-6■■■□□ 15
DKC1O60832 CYB5R3-206ENST00000438270 675 ntTSL 313.7□□□□□ -0.224e-16■■■□□ 15
DKC1O60832 FAM193B-207ENST00000506879 580 ntTSL 213.43□□□□□ -0.266e-6■■■□□ 15
DKC1O60832 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC13.33□□□□□ -0.286e-6■■■□□ 15
DKC1O60832 AC092135.1-201ENST00000623398 2059 ntBASIC13.28□□□□□ -0.286e-6■■■□□ 15
DKC1O60832 ADGRD1-203ENST00000376682 4135 ntTSL 213.01□□□□□ -0.336e-6■■■□□ 15
DKC1O60832 PPP2R5C-203ENST00000350249 3845 ntTSL 1 (best) BASIC13□□□□□ -0.336e-6■■■□□ 15
DKC1O60832 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC12.95□□□□□ -0.344e-16■■■□□ 15
DKC1O60832 PPP2R5C-209ENST00000553890 492 ntTSL 312.86□□□□□ -0.356e-6■■■□□ 15
DKC1O60832 PPP2R5C-224ENST00000556946 735 ntTSL 2 BASIC12.86□□□□□ -0.356e-6■■■□□ 15
DKC1O60832 ADGRD1-213ENST00000543617 1182 ntTSL 1 (best) BASIC12.84□□□□□ -0.356e-6■■■□□ 15
DKC1O60832 IMMT-207ENST00000449247 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.386e-6■■■□□ 15
DKC1O60832 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.396e-6■■■□□ 15
DKC1O60832 IMMT-202ENST00000409051 2515 ntTSL 2 BASIC12.46□□□□□ -0.416e-6■■■□□ 15
DKC1O60832 CLCN6-202ENST00000346436 5583 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.426e-6■■■□□ 15
DKC1O60832 FAM193B-214ENST00000510479 2800 ntTSL 212.41□□□□□ -0.426e-6■■■□□ 15
DKC1O60832 DENND1A-206ENST00000473039 4800 ntTSL 1 (best)12.39□□□□□ -0.437e-7■■■□□ 15
DKC1O60832 IMMT-206ENST00000442664 2627 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.56e-6■■■□□ 15
DKC1O60832 DENND1A-212ENST00000497135 1207 ntTSL 511.84□□□□□ -0.517e-7■■■□□ 15
DKC1O60832 SMAP2-205ENST00000539317 2501 ntTSL 2 BASIC11.64□□□□□ -0.552e-8■■■□□ 15
DKC1O60832 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC11.6□□□□□ -0.556e-6■■■□□ 15
DKC1O60832 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.566e-6■■■□□ 15
DKC1O60832 RPS7-203ENST00000406376 704 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.566e-6■■■□□ 15
DKC1O60832 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC11.52□□□□□ -0.576e-6■■■□□ 15
DKC1O60832 PPP2R5C-230ENST00000557714 536 ntTSL 4 BASIC11.44□□□□□ -0.586e-6■■■□□ 15
DKC1O60832 MBTPS2-202ENST00000379484 4428 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.616e-6■■■□□ 15
DKC1O60832 DENND1A-211ENST00000491650 842 ntTSL 511.24□□□□□ -0.617e-7■■■□□ 15
DKC1O60832 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.666e-6■■■□□ 15
DKC1O60832 AGK-203ENST00000473247 1550 ntTSL 5 BASIC10.94□□□□□ -0.666e-6■■■□□ 15
DKC1O60832 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC10.86□□□□□ -0.676e-6■■■□□ 15
DKC1O60832 AGK-209ENST00000496273 491 ntTSL 310.65□□□□□ -0.76e-6■■■□□ 15
DKC1O60832 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.762e-8■■■□□ 15
DKC1O60832 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC10.23□□□□□ -0.776e-6■■■□□ 15
DKC1O60832 DENND1A-204ENST00000394215 1380 ntTSL 5 BASIC10.06□□□□□ -0.87e-7■■■□□ 15
DKC1O60832 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC10.01□□□□□ -0.812e-8■■■□□ 15
DKC1O60832 PPP2R5C-208ENST00000553842 421 ntTSL 39.58□□□□□ -0.886e-6■■■□□ 15
DKC1O60832 STXBP6-207ENST00000550887 1311 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.892e-8■■■□□ 15
DKC1O60832 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC9.35□□□□□ -0.916e-6■■■□□ 15
DKC1O60832 STXBP6-204ENST00000546511 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.922e-8■■■□□ 15
DKC1O60832 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC9.25□□□□□ -0.936e-6■■■□□ 15
DKC1O60832 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.946e-6■■■□□ 15
DKC1O60832 RPS7-204ENST00000407445 833 ntTSL 2 BASIC9.04□□□□□ -0.966e-6■■■□□ 15
DKC1O60832 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC8.87□□□□□ -0.996e-6■■■□□ 15
DKC1O60832 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.014e-16■■■□□ 15
DKC1O60832 PPP2R5C-220ENST00000556373 285 ntTSL 58.47□□□□□ -1.056e-6■■■□□ 15
DKC1O60832 IMMT-205ENST00000419070 2172 ntTSL 58.04□□□□□ -1.126e-6■■■□□ 15
DKC1O60832 AGK-204ENST00000473884 568 ntTSL 57.89□□□□□ -1.156e-6■■■□□ 15
DKC1O60832 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.156e-6■■■□□ 15
DKC1O60832 AGK-207ENST00000494688 951 ntTSL 57.7□□□□□ -1.186e-6■■■□□ 15
DKC1O60832 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.196e-6■■■□□ 15
DKC1O60832 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.216e-6■■■□□ 15
DKC1O60832 STXBP6-205ENST00000548182 3355 ntTSL 27.42□□□□□ -1.222e-8■■■□□ 15
DKC1O60832 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.42□□□□□ -1.226e-6■■■□□ 15
DKC1O60832 MTSS1-212ENST00000522162 553 ntTSL 46.54□□□□□ -1.363e-7■■■□□ 15
DKC1O60832 PPP2R5C-221ENST00000556493 457 ntTSL 46.27□□□□□ -1.416e-6■■■□□ 15
DKC1O60832 PPP2R5C-229ENST00000557621 759 ntTSL 55.82□□□□□ -1.486e-6■■■□□ 15
DKC1O60832 AGK-202ENST00000465241 988 ntTSL 25.69□□□□□ -1.56e-6■■■□□ 15
DKC1O60832 PPP2R5C-219ENST00000556307 601 ntTSL 35.32□□□□□ -1.566e-6■■■□□ 15
DKC1O60832 HMGCR-213ENST00000515776 501 ntTSL 24.04□□□□□ -1.766e-6■■■□□ 15
DKC1O60832 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.72□□□□□ -1.816e-6■■■□□ 15
DKC1O60832 ASAP1-204ENST00000519169 708 ntTSL 23.54□□□□□ -1.842e-8■■■□□ 15
DKC1O60832 ASAP1-207ENST00000520342 566 ntTSL 53.46□□□□□ -1.862e-8■■■□□ 15
DKC1O60832 TTC38-205ENST00000451998 582 ntTSL 217.65■□□□□ 0.421e-14■■■□□ 15
DKC1O60832 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.121e-14■■■□□ 15
DKC1O60832 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.148e-9■■■□□ 15
DKC1O60832 USP36-214ENST00000589225 5885 ntTSL 1 (best)16.07■□□□□ 0.168e-9■■■□□ 15
DKC1O60832 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.158e-9■■■□□ 15
DKC1O60832 USP36-207ENST00000587010 607 ntTSL 315.97■□□□□ 0.158e-9■■■□□ 15
DKC1O60832 USP36-221ENST00000592231 2479 ntTSL 215.34■□□□□ 0.058e-9■■■□□ 15
DKC1O60832 USP36-219ENST00000591052 427 ntTSL 311.22□□□□□ -0.618e-9■■■□□ 15
DKC1O60832 USP36-208ENST00000587379 606 ntTSL 310.84□□□□□ -0.678e-9■■■□□ 15
DKC1O60832 USP36-211ENST00000588130 602 ntTSL 29.7□□□□□ -0.868e-9■■■□□ 15
DKC1O60832 EEF2-205ENST00000598436 549 ntTSL 214.34□□□□□ -0.114e-83■■■□□ 14.9
DKC1O60832 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.298e-7■■■□□ 14.9
DKC1O60832 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.328e-7■■■□□ 14.9
DKC1O60832 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.654e-11■■■□□ 14.9
DKC1O60832 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.02■□□□□ 0.474e-11■■■□□ 14.9
DKC1O60832 PACSIN2-209ENST00000453079 505 ntTSL 25.32□□□□□ -1.564e-11■■■□□ 14.9
DKC1O60832 PEG10-204ENST00000493935 763 ntTSL 413.84□□□□□ -0.192e-7■■■□□ 14.8
DKC1O60832 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC10.53□□□□□ -0.722e-7■■■□□ 14.8
DKC1O60832 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.832e-7■■■□□ 14.8
DKC1O60832 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.832e-7■■■□□ 14.8
DKC1O60832 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC9.32□□□□□ -0.922e-7■■■□□ 14.8
DKC1O60832 PEG10-201ENST00000465184 788 ntTSL 35.89□□□□□ -1.472e-7■■■□□ 14.8
DKC1O60832 snoU18.1-201ENST00000629629 71 ntBASIC0.5□□□□□ -2.334e-22■■■□□ 14.8
DKC1O60832 SNORD18B-201ENST00000365659 72 ntBASIC-0.26□□□□□ -2.454e-22■■■□□ 14.8
DKC1O60832 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.399e-8■■■□□ 14.8
DKC1O60832 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.04■□□□□ 0.489e-8■■■□□ 14.8
DKC1O60832 EEFSEC-204ENST00000484438 640 ntTSL 317.93■□□□□ 0.469e-8■■■□□ 14.8
DKC1O60832 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC10.5□□□□□ -0.732e-6■■■□□ 14.8
DKC1O60832 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.872e-6■■■□□ 14.8
DKC1O60832 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC11.05□□□□□ -0.641e-323■■■□□ 14.7
DKC1O60832 HECTD1-208ENST00000554882 3748 ntTSL 55.58□□□□□ -1.528e-7■■■□□ 14.7
DKC1O60832 HECTD1-210ENST00000555843 4281 ntTSL 25.38□□□□□ -1.558e-7■■■□□ 14.7
DKC1O60832 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.521e-323■■■□□ 14.6
Retrieved 100 of 8,567 protein–RNA pairs in 244.8 ms