RNA–Protein interactions for RNA: ENST00000394215.6

DENND1A-204, Transcript of DENN domain containing 1A, humanhuman

TSL 5 BASIC

Gene DENND1A, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1A-204ENST00000394215 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
DENND1A-204ENST00000394215 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
DENND1A-204ENST00000394215 PHF23Q9BUL5 403 aaPredicted RBP21.3■■□□□ 1
DENND1A-204ENST00000394215 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
DENND1A-204ENST00000394215 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
DENND1A-204ENST00000394215 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
DENND1A-204ENST00000394215 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
DENND1A-204ENST00000394215 FOXD1Q16676 465 aa18.81■□□□□ 0.6
DENND1A-204ENST00000394215 ADRA2BP18089 450 aa18.63■□□□□ 0.57
DENND1A-204ENST00000394215 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
DENND1A-204ENST00000394215 ABCC9O60706 1549 aa18.16■□□□□ 0.5
DENND1A-204ENST00000394215 KCNA4P22459 653 aa17.93■□□□□ 0.46
DENND1A-204ENST00000394215 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
DENND1A-204ENST00000394215 ZCCHC6Q5VYS8 1495 aaKnown RBP17.77■□□□□ 0.44
DENND1A-204ENST00000394215 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
DENND1A-204ENST00000394215 NACADO15069 1562 aa17.63■□□□□ 0.41
DENND1A-204ENST00000394215 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
DENND1A-204ENST00000394215 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
DENND1A-204ENST00000394215 RB1CC1Q8TDY2 1594 aa17.59■□□□□ 0.41
DENND1A-204ENST00000394215 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
DENND1A-204ENST00000394215 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
DENND1A-204ENST00000394215 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
DENND1A-204ENST00000394215 UNC13AQ9UPW8 1703 aa17.23■□□□□ 0.35
DENND1A-204ENST00000394215 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
DENND1A-204ENST00000394215 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
DENND1A-204ENST00000394215 MSH5O43196 834 aa17.14■□□□□ 0.33
DENND1A-204ENST00000394215 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
DENND1A-204ENST00000394215 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
DENND1A-204ENST00000394215 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.33
DENND1A-204ENST00000394215 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
DENND1A-204ENST00000394215 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.31
DENND1A-204ENST00000394215 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
DENND1A-204ENST00000394215 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
DENND1A-204ENST00000394215 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
DENND1A-204ENST00000394215 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
DENND1A-204ENST00000394215 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
DENND1A-204ENST00000394215 CECR2Q9BXF3 1484 aa16.51■□□□□ 0.23
DENND1A-204ENST00000394215 ZBTB22O15209 634 aa16.49■□□□□ 0.23
DENND1A-204ENST00000394215 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
DENND1A-204ENST00000394215 CC2D2AQ9P2K1 1620 aa16.46■□□□□ 0.23
DENND1A-204ENST00000394215 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
DENND1A-204ENST00000394215 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
DENND1A-204ENST00000394215 MROH2BQ7Z745 1585 aa16.37■□□□□ 0.21
DENND1A-204ENST00000394215 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
DENND1A-204ENST00000394215 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
DENND1A-204ENST00000394215 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
DENND1A-204ENST00000394215 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
DENND1A-204ENST00000394215 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
DENND1A-204ENST00000394215 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
DENND1A-204ENST00000394215 NCAPD3P42695 1498 aa16.25■□□□□ 0.19
DENND1A-204ENST00000394215 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
DENND1A-204ENST00000394215 HMGXB3Q12766 1538 aa16.23■□□□□ 0.19
DENND1A-204ENST00000394215 WIZO95785 1651 aa16.21■□□□□ 0.19
DENND1A-204ENST00000394215 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
DENND1A-204ENST00000394215 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
DENND1A-204ENST00000394215 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
DENND1A-204ENST00000394215 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
DENND1A-204ENST00000394215 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
DENND1A-204ENST00000394215 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
DENND1A-204ENST00000394215 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
DENND1A-204ENST00000394215 NESP48681 1621 aa15.8■□□□□ 0.12
DENND1A-204ENST00000394215 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
DENND1A-204ENST00000394215 CFTRP13569 1480 aa15.74■□□□□ 0.11
DENND1A-204ENST00000394215 ATXN8OSP0DMR3 200 aa15.72■□□□□ 0.11
DENND1A-204ENST00000394215 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
DENND1A-204ENST00000394215 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
DENND1A-204ENST00000394215 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
DENND1A-204ENST00000394215 KIF21AQ7Z4S6 1674 aa15.64■□□□□ 0.09
DENND1A-204ENST00000394215 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
DENND1A-204ENST00000394215 FANCD2Q9BXW9 1451 aa15.6■□□□□ 0.09
DENND1A-204ENST00000394215 CEP164Q9UPV0 1460 aa15.57■□□□□ 0.08
DENND1A-204ENST00000394215 THOC2Q8NI27 1593 aaKnown RBP15.56■□□□□ 0.08
DENND1A-204ENST00000394215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.55■□□□□ 0.081e-7■■□□□ 12.3
DENND1A-204ENST00000394215 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
DENND1A-204ENST00000394215 WDR62O43379 1518 aa15.48■□□□□ 0.07
DENND1A-204ENST00000394215 URB2Q14146 1524 aaKnown RBP15.45■□□□□ 0.06
DENND1A-204ENST00000394215 CUX2O14529 1486 aa15.42■□□□□ 0.06
DENND1A-204ENST00000394215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
DENND1A-204ENST00000394215 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
DENND1A-204ENST00000394215 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
DENND1A-204ENST00000394215 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
DENND1A-204ENST00000394215 ABCC8Q09428 1581 aa15.37■□□□□ 0.05
DENND1A-204ENST00000394215 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
DENND1A-204ENST00000394215 CUX1P39880 1505 aa15.36■□□□□ 0.05
DENND1A-204ENST00000394215 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
DENND1A-204ENST00000394215 FKBP8Q14318 412 aa15.31■□□□□ 0.04
DENND1A-204ENST00000394215 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
DENND1A-204ENST00000394215 WRNQ14191 1432 aaPredicted RBP eCLIP15.3■□□□□ 0.04
DENND1A-204ENST00000394215 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
DENND1A-204ENST00000394215 BIVM-ERCC5R4GMW8 1640 aa15.29■□□□□ 0.04
DENND1A-204ENST00000394215 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
DENND1A-204ENST00000394215 POLA1P09884 1462 aaPredicted RBP15.28■□□□□ 0.04
DENND1A-204ENST00000394215 FGD5Q6ZNL6 1462 aa15.26■□□□□ 0.03
DENND1A-204ENST00000394215 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
DENND1A-204ENST00000394215 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
DENND1A-204ENST00000394215 WDR97A6NE52 1622 aa15.18■□□□□ 0.02
DENND1A-204ENST00000394215 RAD54L2Q9Y4B4 1467 aa15.18■□□□□ 0.02
DENND1A-204ENST00000394215 SOGA1O94964 1423 aa15.17■□□□□ 0.02
DENND1A-204ENST00000394215 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
DENND1A-204ENST00000394215 EIF4G3O43432 1585 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms