RNA–Protein interactions for RNA: ENST00000451998.1

TTC38-205, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 2

Gene TTC38, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-205ENST00000451998 NISCHQ9Y2I1 1504 aa38.77■■■■□ 3.8
TTC38-205ENST00000451998 CCDC180Q9P1Z9 1646 aa34.57■■■■□ 3.12
TTC38-205ENST00000451998 ABCC9O60706 1549 aa34.45■■■■□ 3.11
TTC38-205ENST00000451998 DCAF8L2P0C7V8 631 aa32.82■■■□□ 2.84
TTC38-205ENST00000451998 RB1CC1Q8TDY2 1594 aa32.82■■■□□ 2.84
TTC38-205ENST00000451998 NACADO15069 1562 aa32.63■■■□□ 2.81
TTC38-205ENST00000451998 ZCCHC6Q5VYS8 1495 aaKnown RBP32.23■■■□□ 2.75
TTC38-205ENST00000451998 MYO15BQ96JP2 1530 aa32.2■■■□□ 2.74
TTC38-205ENST00000451998 PABPN1Q86U42 306 aaKnown RBP eCLIP32.17■■■□□ 2.747e-7■□□□□ 10.4
TTC38-205ENST00000451998 UNC13AQ9UPW8 1703 aa31.99■■■□□ 2.71
TTC38-205ENST00000451998 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.7
TTC38-205ENST00000451998 DNAJC5BQ9UF47 199 aa31.94■■■□□ 2.7
TTC38-205ENST00000451998 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
TTC38-205ENST00000451998 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
TTC38-205ENST00000451998 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
TTC38-205ENST00000451998 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
TTC38-205ENST00000451998 CC2D2AQ9P2K1 1620 aa31.05■■■□□ 2.56
TTC38-205ENST00000451998 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.55
TTC38-205ENST00000451998 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
TTC38-205ENST00000451998 ATAD2BQ9ULI0 1458 aa30.13■■■□□ 2.41
TTC38-205ENST00000451998 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
TTC38-205ENST00000451998 BAZ1AQ9NRL2 1556 aaPredicted RBP30.08■■■□□ 2.41
TTC38-205ENST00000451998 SMARCA2P51531 1590 aa30.06■■■□□ 2.4
TTC38-205ENST00000451998 HMGXB3Q12766 1538 aa29.94■■■□□ 2.38
TTC38-205ENST00000451998 MROH2BQ7Z745 1585 aa29.93■■■□□ 2.38
TTC38-205ENST00000451998 BAZ1BQ9UIG0 1483 aaKnown RBP29.92■■■□□ 2.38
TTC38-205ENST00000451998 PEG3Q9GZU2 1588 aa29.79■■■□□ 2.36
TTC38-205ENST00000451998 ERCC6Q03468 1493 aa29.75■■■□□ 2.35
TTC38-205ENST00000451998 NESP48681 1621 aa29.67■■■□□ 2.34
TTC38-205ENST00000451998 WIZO95785 1651 aa29.58■■■□□ 2.33
TTC38-205ENST00000451998 CUX2O14529 1486 aa29.43■■■□□ 2.3
TTC38-205ENST00000451998 RSF1Q96T23 1441 aaPredicted RBP29.42■■■□□ 2.3
TTC38-205ENST00000451998 LAMC3Q9Y6N6 1575 aa29.39■■■□□ 2.3
TTC38-205ENST00000451998 CADPSQ9ULU8 1353 aa29.28■■■□□ 2.28
TTC38-205ENST00000451998 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
TTC38-205ENST00000451998 TOP2AP11388 1531 aaKnown RBP29.23■■■□□ 2.27
TTC38-205ENST00000451998 KIF21AQ7Z4S6 1674 aa29.22■■■□□ 2.27
TTC38-205ENST00000451998 THOC2Q8NI27 1593 aaKnown RBP29.22■■■□□ 2.27
TTC38-205ENST00000451998 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
TTC38-205ENST00000451998 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
TTC38-205ENST00000451998 CEP164Q9UPV0 1460 aa29■■■□□ 2.23
TTC38-205ENST00000451998 CFTRP13569 1480 aa28.99■■■□□ 2.23
TTC38-205ENST00000451998 FANCD2Q9BXW9 1451 aa28.99■■■□□ 2.23
TTC38-205ENST00000451998 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
TTC38-205ENST00000451998 WDR62O43379 1518 aa28.89■■■□□ 2.22
TTC38-205ENST00000451998 URB2Q14146 1524 aaKnown RBP28.72■■■□□ 2.19
TTC38-205ENST00000451998 PRDM2Q13029 1718 aa28.65■■■□□ 2.18
TTC38-205ENST00000451998 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
TTC38-205ENST00000451998 TOPBP1Q92547 1522 aa28.46■■■□□ 2.15
TTC38-205ENST00000451998 IFT140Q96RY7 1462 aa28.38■■■□□ 2.13
TTC38-205ENST00000451998 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
TTC38-205ENST00000451998 ZNF608Q9ULD9 1512 aaPredicted RBP28.34■■■□□ 2.13
TTC38-205ENST00000451998 ABCC8Q09428 1581 aa28.34■■■□□ 2.13
TTC38-205ENST00000451998 OSCARQ8IYS5 282 aa28.2■■■□□ 2.1
TTC38-205ENST00000451998 POLA1P09884 1462 aaPredicted RBP28.2■■■□□ 2.1
TTC38-205ENST00000451998 EIF4G3O43432 1585 aaKnown RBP28.18■■■□□ 2.1
TTC38-205ENST00000451998 RAD54L2Q9Y4B4 1467 aa28.15■■■□□ 2.1
TTC38-205ENST00000451998 AQRO60306 1485 aaKnown RBP eCLIP28.14■■■□□ 2.094e-8■■■■■ 34.1
TTC38-205ENST00000451998 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
TTC38-205ENST00000451998 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
TTC38-205ENST00000451998 FGD5Q6ZNL6 1462 aa28.1■■■□□ 2.09
TTC38-205ENST00000451998 CUX1P39880 1505 aa28.1■■■□□ 2.09
TTC38-205ENST00000451998 SOGA1O94964 1423 aa28.09■■■□□ 2.09
TTC38-205ENST00000451998 TDRD9Q8NDG6 1382 aaKnown RBP28.04■■■□□ 2.08
TTC38-205ENST00000451998 FBLN2P98095 1184 aa28■■■□□ 2.07
TTC38-205ENST00000451998 SNAPC4Q5SXM2 1469 aa27.87■■■□□ 2.05
TTC38-205ENST00000451998 CHD1O14646 1710 aa27.87■■■□□ 2.05
TTC38-205ENST00000451998 WDR97A6NE52 1622 aa27.8■■■□□ 2.04
TTC38-205ENST00000451998 GRIN2BQ13224 1484 aa27.79■■■□□ 2.04
TTC38-205ENST00000451998 WRNQ14191 1432 aaPredicted RBP eCLIP27.79■■■□□ 2.04
TTC38-205ENST00000451998 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
TTC38-205ENST00000451998 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
TTC38-205ENST00000451998 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
TTC38-205ENST00000451998 CHMP7Q8WUX9 453 aaPredicted RBP27.76■■■□□ 2.03
TTC38-205ENST00000451998 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
TTC38-205ENST00000451998 GAPVD1Q14C86 1478 aa27.75■■■□□ 2.03
TTC38-205ENST00000451998 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
TTC38-205ENST00000451998 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
TTC38-205ENST00000451998 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
TTC38-205ENST00000451998 TOP2BQ02880 1626 aa27.7■■■□□ 2.02
TTC38-205ENST00000451998 PBRM1Q86U86 1689 aa27.67■■■□□ 2.02
TTC38-205ENST00000451998 BIVM-ERCC5R4GMW8 1640 aa27.67■■■□□ 2.02
TTC38-205ENST00000451998 ABCA5Q8WWZ7 1642 aa27.66■■■□□ 2.02
TTC38-205ENST00000451998 SYNJ2O15056 1496 aa27.65■■■□□ 2.02
TTC38-205ENST00000451998 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
TTC38-205ENST00000451998 CLASP1Q7Z460 1538 aa27.54■■■□□ 2
TTC38-205ENST00000451998 ARAP1Q96P48 1450 aa27.51■■■□□ 2
TTC38-205ENST00000451998 ADAMTS12P58397 1594 aa27.47■■□□□ 1.99
TTC38-205ENST00000451998 GRIN2AQ12879 1464 aa27.44■■□□□ 1.98
TTC38-205ENST00000451998 FHAD1B1AJZ9 1412 aa27.4■■□□□ 1.98
TTC38-205ENST00000451998 ERICH3Q5RHP9 1530 aa27.38■■□□□ 1.97
TTC38-205ENST00000451998 CEP170Q5SW79 1584 aa27.33■■□□□ 1.97
TTC38-205ENST00000451998 NUP160Q12769 1436 aa27.29■■□□□ 1.96
TTC38-205ENST00000451998 TRHP20396 242 aaPredicted RBP27.24■■□□□ 1.95
TTC38-205ENST00000451998 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
TTC38-205ENST00000451998 ERCC6L2Q5T890 1561 aa27.21■■□□□ 1.95
TTC38-205ENST00000451998 IGF1RP08069 1367 aa27.14■■□□□ 1.94
TTC38-205ENST00000451998 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
TTC38-205ENST00000451998 PRG4Q92954 1404 aaPredicted RBP27.08■■□□□ 1.93
TTC38-205ENST00000451998 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms