RNA–Protein interactions for RNA: ENST00000381031.7

TTC38-201, Transcript of tetratricopeptide repeat domain 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC38, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-201ENST00000381031 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
TTC38-201ENST00000381031 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
TTC38-201ENST00000381031 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
TTC38-201ENST00000381031 MYO15BQ96JP2 1530 aa23.41■■□□□ 1.34
TTC38-201ENST00000381031 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
TTC38-201ENST00000381031 HRCP23327 699 aa23.3■■□□□ 1.32
TTC38-201ENST00000381031 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
TTC38-201ENST00000381031 CCDC180Q9P1Z9 1646 aa23.08■■□□□ 1.29
TTC38-201ENST00000381031 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
TTC38-201ENST00000381031 PPARGC1BQ86YN6 1023 aaKnown RBP22.93■■□□□ 1.26
TTC38-201ENST00000381031 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
TTC38-201ENST00000381031 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
TTC38-201ENST00000381031 LOC105371045A0A1W2PR82 267 aa22.68■■□□□ 1.22
TTC38-201ENST00000381031 TRIM26Q12899 539 aaPredicted RBP22.36■■□□□ 1.17
TTC38-201ENST00000381031 ABCC9O60706 1549 aa22.16■■□□□ 1.14
TTC38-201ENST00000381031 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
TTC38-201ENST00000381031 ZEB1P37275 1124 aaPredicted RBP21.95■■□□□ 1.11
TTC38-201ENST00000381031 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
TTC38-201ENST00000381031 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
TTC38-201ENST00000381031 RB1CC1Q8TDY2 1594 aa21.93■■□□□ 1.1
TTC38-201ENST00000381031 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
TTC38-201ENST00000381031 SCAF1Q9H7N4 1312 aaKnown RBP21.86■■□□□ 1.09
TTC38-201ENST00000381031 EHMT2Q96KQ7 1210 aa21.85■■□□□ 1.09
TTC38-201ENST00000381031 PELP1Q8IZL8 1130 aaKnown RBP21.66■■□□□ 1.06
TTC38-201ENST00000381031 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.04
TTC38-201ENST00000381031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.52■■□□□ 1.04
TTC38-201ENST00000381031 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.03
TTC38-201ENST00000381031 WIZO95785 1651 aa21.45■■□□□ 1.02
TTC38-201ENST00000381031 NEUROD1Q13562 356 aa21.4■■□□□ 1.02
TTC38-201ENST00000381031 ACIN1Q9UKV3 1341 aaKnown RBP21.39■■□□□ 1.01
TTC38-201ENST00000381031 CCER1Q8TC90 406 aaPredicted RBP21.39■■□□□ 1.01
TTC38-201ENST00000381031 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1.01
TTC38-201ENST00000381031 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
TTC38-201ENST00000381031 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
TTC38-201ENST00000381031 DIEXFQ68CQ4 756 aaKnown RBP21.24■□□□□ 0.99
TTC38-201ENST00000381031 NACADO15069 1562 aa21.23■□□□□ 0.99
TTC38-201ENST00000381031 GTF3C3Q9Y5Q9 886 aa21.2■□□□□ 0.98
TTC38-201ENST00000381031 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
TTC38-201ENST00000381031 CCDC88BA6NC98 1476 aa21.14■□□□□ 0.98
TTC38-201ENST00000381031 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
TTC38-201ENST00000381031 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
TTC38-201ENST00000381031 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
TTC38-201ENST00000381031 SOGA1O94964 1423 aa21.04■□□□□ 0.96
TTC38-201ENST00000381031 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
TTC38-201ENST00000381031 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
TTC38-201ENST00000381031 TNIKQ9UKE5 1360 aa20.97■□□□□ 0.95
TTC38-201ENST00000381031 SMARCA2P51531 1590 aa20.96■□□□□ 0.95
TTC38-201ENST00000381031 ZNF316A6NFI3 1004 aaPredicted RBP20.93■□□□□ 0.94
TTC38-201ENST00000381031 SMARCA4P51532 1647 aa20.88■□□□□ 0.93
TTC38-201ENST00000381031 YTHDC1Q96MU7 727 aaKnown RBP20.87■□□□□ 0.93
TTC38-201ENST00000381031 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
TTC38-201ENST00000381031 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
TTC38-201ENST00000381031 MIER1Q8N108 512 aa20.79■□□□□ 0.92
TTC38-201ENST00000381031 EEA1Q15075 1411 aa20.78■□□□□ 0.92
TTC38-201ENST00000381031 GOLGA3Q08378 1498 aa20.77■□□□□ 0.91
TTC38-201ENST00000381031 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
TTC38-201ENST00000381031 UNC13AQ9UPW8 1703 aa20.69■□□□□ 0.9
TTC38-201ENST00000381031 MYT1Q01538 1121 aa20.61■□□□□ 0.89
TTC38-201ENST00000381031 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
TTC38-201ENST00000381031 CLIP1P30622 1438 aa20.58■□□□□ 0.89
TTC38-201ENST00000381031 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.88
TTC38-201ENST00000381031 KIF21BO75037 1637 aa20.57■□□□□ 0.88
TTC38-201ENST00000381031 VPS8Q8N3P4 1428 aa20.53■□□□□ 0.88
TTC38-201ENST00000381031 RAPGEF2Q9Y4G8 1499 aa20.48■□□□□ 0.87
TTC38-201ENST00000381031 RANGAP1P46060 587 aaPredicted RBP20.47■□□□□ 0.87
TTC38-201ENST00000381031 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.864e-7■■□□□ 12.3
TTC38-201ENST00000381031 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
TTC38-201ENST00000381031 APLP2Q06481 763 aa20.38■□□□□ 0.85
TTC38-201ENST00000381031 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
TTC38-201ENST00000381031 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
TTC38-201ENST00000381031 DHX57Q6P158 1386 aaKnown RBP20.37■□□□□ 0.85
TTC38-201ENST00000381031 SUPT16HQ9Y5B9 1047 aaKnown RBP20.3■□□□□ 0.84
TTC38-201ENST00000381031 KANK4Q5T7N3 995 aaPredicted RBP20.26■□□□□ 0.83
TTC38-201ENST00000381031 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
TTC38-201ENST00000381031 CLSPNQ9HAW4 1339 aa20.24■□□□□ 0.83
TTC38-201ENST00000381031 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
TTC38-201ENST00000381031 TOP2BQ02880 1626 aa20.21■□□□□ 0.83
TTC38-201ENST00000381031 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
TTC38-201ENST00000381031 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
TTC38-201ENST00000381031 RRBP1Q9P2E9 1410 aaKnown RBP20.13■□□□□ 0.81
TTC38-201ENST00000381031 KCNH8Q96L42 1107 aa20.12■□□□□ 0.81
TTC38-201ENST00000381031 BIVM-ERCC5R4GMW8 1640 aa20.12■□□□□ 0.81
TTC38-201ENST00000381031 TSHZ2Q9NRE2 1034 aa20.11■□□□□ 0.81
TTC38-201ENST00000381031 CUX2O14529 1486 aa20.07■□□□□ 0.8
TTC38-201ENST00000381031 ITGAEP38570 1179 aa20.04■□□□□ 0.8
TTC38-201ENST00000381031 CCNB3Q8WWL7 1395 aa20.02■□□□□ 0.8
TTC38-201ENST00000381031 MAPKBP1O60336 1514 aa19.99■□□□□ 0.79
TTC38-201ENST00000381031 ARHGAP35Q9NRY4 1499 aa19.99■□□□□ 0.79
TTC38-201ENST00000381031 CUX1P39880 1505 aa19.98■□□□□ 0.79
TTC38-201ENST00000381031 RAB3GAP2Q9H2M9 1393 aa19.95■□□□□ 0.78
TTC38-201ENST00000381031 BCANQ96GW7 911 aa19.93■□□□□ 0.78
TTC38-201ENST00000381031 KIF27Q86VH2 1401 aa19.9■□□□□ 0.78
TTC38-201ENST00000381031 ANP32EQ9BTT0 268 aa19.89■□□□□ 0.77
TTC38-201ENST00000381031 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
TTC38-201ENST00000381031 DDX10Q13206 875 aaKnown RBP19.85■□□□□ 0.77
TTC38-201ENST00000381031 SIN3AQ96ST3 1273 aa19.85■□□□□ 0.77
TTC38-201ENST00000381031 FKBP8Q14318 412 aa19.83■□□□□ 0.76
TTC38-201ENST00000381031 TIAM1Q13009 1591 aa19.82■□□□□ 0.76
TTC38-201ENST00000381031 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
TTC38-201ENST00000381031 PHLDB1Q86UU1 1377 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms