Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
UPF2Q9HAU5 AL133380.1-201ENST00000506013 324 ntBASIC31.61■■■□□ 2.65
UPF2Q9HAU5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.6■■■□□ 2.65
UPF2Q9HAU5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
UPF2Q9HAU5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
UPF2Q9HAU5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
UPF2Q9HAU5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.58■■■□□ 2.65
UPF2Q9HAU5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.58■■■□□ 2.65
UPF2Q9HAU5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
UPF2Q9HAU5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
UPF2Q9HAU5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
UPF2Q9HAU5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
UPF2Q9HAU5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
UPF2Q9HAU5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
UPF2Q9HAU5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
UPF2Q9HAU5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
UPF2Q9HAU5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
UPF2Q9HAU5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.54■■■□□ 2.64
UPF2Q9HAU5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
UPF2Q9HAU5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.54■■■□□ 2.64
UPF2Q9HAU5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
UPF2Q9HAU5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
UPF2Q9HAU5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.53■■■□□ 2.64
UPF2Q9HAU5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.53■■■□□ 2.64
UPF2Q9HAU5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
UPF2Q9HAU5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.52■■■□□ 2.64
UPF2Q9HAU5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
UPF2Q9HAU5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
UPF2Q9HAU5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.52■■■□□ 2.64
UPF2Q9HAU5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
UPF2Q9HAU5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
UPF2Q9HAU5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
UPF2Q9HAU5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
UPF2Q9HAU5 BX255925.1-201ENST00000566954 1854 ntBASIC31.5■■■□□ 2.63
UPF2Q9HAU5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
UPF2Q9HAU5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC31.49■■■□□ 2.63
UPF2Q9HAU5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.49■■■□□ 2.63
UPF2Q9HAU5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.48■■■□□ 2.63
UPF2Q9HAU5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
UPF2Q9HAU5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.48■■■□□ 2.63
UPF2Q9HAU5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
UPF2Q9HAU5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
UPF2Q9HAU5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
UPF2Q9HAU5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
UPF2Q9HAU5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.47■■■□□ 2.63
UPF2Q9HAU5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
UPF2Q9HAU5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
UPF2Q9HAU5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
UPF2Q9HAU5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
UPF2Q9HAU5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
UPF2Q9HAU5 AP004833.2-201ENST00000532228 1454 ntBASIC31.45■■■□□ 2.62
UPF2Q9HAU5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
UPF2Q9HAU5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.44■■■□□ 2.62
UPF2Q9HAU5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UPF2Q9HAU5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
UPF2Q9HAU5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
UPF2Q9HAU5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
UPF2Q9HAU5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
UPF2Q9HAU5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
UPF2Q9HAU5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
UPF2Q9HAU5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
UPF2Q9HAU5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
UPF2Q9HAU5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
UPF2Q9HAU5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.4■■■□□ 2.62
UPF2Q9HAU5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC31.4■■■□□ 2.62
UPF2Q9HAU5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
UPF2Q9HAU5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
UPF2Q9HAU5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
UPF2Q9HAU5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
UPF2Q9HAU5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.37■■■□□ 2.61
UPF2Q9HAU5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
UPF2Q9HAU5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
UPF2Q9HAU5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
UPF2Q9HAU5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.36■■■□□ 2.61
UPF2Q9HAU5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
UPF2Q9HAU5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
UPF2Q9HAU5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
UPF2Q9HAU5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
UPF2Q9HAU5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
UPF2Q9HAU5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
UPF2Q9HAU5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.34■■■□□ 2.61
UPF2Q9HAU5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.34■■■□□ 2.61
UPF2Q9HAU5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
UPF2Q9HAU5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
UPF2Q9HAU5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.33■■■□□ 2.61
UPF2Q9HAU5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
UPF2Q9HAU5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
UPF2Q9HAU5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
UPF2Q9HAU5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.32■■■□□ 2.6
UPF2Q9HAU5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.32■■■□□ 2.6
UPF2Q9HAU5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.31■■■□□ 2.6
UPF2Q9HAU5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.31■■■□□ 2.6
UPF2Q9HAU5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.31■■■□□ 2.6
UPF2Q9HAU5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
UPF2Q9HAU5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
UPF2Q9HAU5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.29■■■□□ 2.6
UPF2Q9HAU5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
UPF2Q9HAU5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
UPF2Q9HAU5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
UPF2Q9HAU5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms