Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42EP4Q9H3Q1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42EP4Q9H3Q1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.41■■□□□ 1.82
CDC42EP4Q9H3Q1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
CDC42EP4Q9H3Q1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42EP4Q9H3Q1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.4■■□□□ 1.82
CDC42EP4Q9H3Q1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CDC42EP4Q9H3Q1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDC42EP4Q9H3Q1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDC42EP4Q9H3Q1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CDC42EP4Q9H3Q1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.39■■□□□ 1.82
CDC42EP4Q9H3Q1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.39■■□□□ 1.81
CDC42EP4Q9H3Q1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.38■■□□□ 1.81
CDC42EP4Q9H3Q1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42EP4Q9H3Q1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CDC42EP4Q9H3Q1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42EP4Q9H3Q1 BX255925.1-201ENST00000566954 1854 ntBASIC26.36■■□□□ 1.81
CDC42EP4Q9H3Q1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42EP4Q9H3Q1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CDC42EP4Q9H3Q1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.35■■□□□ 1.81
CDC42EP4Q9H3Q1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CDC42EP4Q9H3Q1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CDC42EP4Q9H3Q1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CDC42EP4Q9H3Q1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CDC42EP4Q9H3Q1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
CDC42EP4Q9H3Q1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
CDC42EP4Q9H3Q1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
CDC42EP4Q9H3Q1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.33■■□□□ 1.81
CDC42EP4Q9H3Q1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CDC42EP4Q9H3Q1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CDC42EP4Q9H3Q1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CDC42EP4Q9H3Q1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
CDC42EP4Q9H3Q1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CDC42EP4Q9H3Q1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.31■■□□□ 1.8
CDC42EP4Q9H3Q1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.31■■□□□ 1.8
CDC42EP4Q9H3Q1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.31■■□□□ 1.8
CDC42EP4Q9H3Q1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42EP4Q9H3Q1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42EP4Q9H3Q1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42EP4Q9H3Q1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42EP4Q9H3Q1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.29■■□□□ 1.8
CDC42EP4Q9H3Q1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42EP4Q9H3Q1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42EP4Q9H3Q1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42EP4Q9H3Q1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.28■■□□□ 1.8
CDC42EP4Q9H3Q1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42EP4Q9H3Q1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.28■■□□□ 1.8
CDC42EP4Q9H3Q1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.28■■□□□ 1.8
CDC42EP4Q9H3Q1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42EP4Q9H3Q1 AP004833.2-201ENST00000532228 1454 ntBASIC26.28■■□□□ 1.8
CDC42EP4Q9H3Q1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.27■■□□□ 1.8
CDC42EP4Q9H3Q1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42EP4Q9H3Q1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42EP4Q9H3Q1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42EP4Q9H3Q1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42EP4Q9H3Q1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42EP4Q9H3Q1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42EP4Q9H3Q1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.25■■□□□ 1.79
CDC42EP4Q9H3Q1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42EP4Q9H3Q1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDC42EP4Q9H3Q1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
CDC42EP4Q9H3Q1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDC42EP4Q9H3Q1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDC42EP4Q9H3Q1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CDC42EP4Q9H3Q1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDC42EP4Q9H3Q1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CDC42EP4Q9H3Q1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CDC42EP4Q9H3Q1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42EP4Q9H3Q1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42EP4Q9H3Q1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.22■■□□□ 1.79
CDC42EP4Q9H3Q1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CDC42EP4Q9H3Q1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDC42EP4Q9H3Q1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CDC42EP4Q9H3Q1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDC42EP4Q9H3Q1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CDC42EP4Q9H3Q1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDC42EP4Q9H3Q1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42EP4Q9H3Q1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42EP4Q9H3Q1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDC42EP4Q9H3Q1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.19■■□□□ 1.78
CDC42EP4Q9H3Q1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDC42EP4Q9H3Q1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CDC42EP4Q9H3Q1 LINC01003-201ENST00000564834 1764 ntBASIC26.18■■□□□ 1.78
CDC42EP4Q9H3Q1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CDC42EP4Q9H3Q1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.17■■□□□ 1.78
CDC42EP4Q9H3Q1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDC42EP4Q9H3Q1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
CDC42EP4Q9H3Q1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.16■■□□□ 1.78
CDC42EP4Q9H3Q1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42EP4Q9H3Q1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42EP4Q9H3Q1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42EP4Q9H3Q1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42EP4Q9H3Q1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42EP4Q9H3Q1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42EP4Q9H3Q1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42EP4Q9H3Q1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.15■■□□□ 1.78
CDC42EP4Q9H3Q1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42EP4Q9H3Q1 AC127502.1-201ENST00000399971 1502 ntBASIC26.14■■□□□ 1.78
CDC42EP4Q9H3Q1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.14■■□□□ 1.78
CDC42EP4Q9H3Q1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms