Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.89■■■□□ 2.22
DHX40Q8IX18 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
DHX40Q8IX18 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
DHX40Q8IX18 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
DHX40Q8IX18 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
DHX40Q8IX18 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
DHX40Q8IX18 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
DHX40Q8IX18 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
DHX40Q8IX18 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
DHX40Q8IX18 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
DHX40Q8IX18 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
DHX40Q8IX18 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
DHX40Q8IX18 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.85■■■□□ 2.21
DHX40Q8IX18 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
DHX40Q8IX18 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
DHX40Q8IX18 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
DHX40Q8IX18 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
DHX40Q8IX18 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
DHX40Q8IX18 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
DHX40Q8IX18 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.83■■■□□ 2.21
DHX40Q8IX18 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
DHX40Q8IX18 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
DHX40Q8IX18 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
DHX40Q8IX18 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
DHX40Q8IX18 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
DHX40Q8IX18 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
DHX40Q8IX18 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
DHX40Q8IX18 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
DHX40Q8IX18 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
DHX40Q8IX18 RARRES2P7-201ENST00000567349 469 ntBASIC28.8■■■□□ 2.2
DHX40Q8IX18 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
DHX40Q8IX18 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
DHX40Q8IX18 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
DHX40Q8IX18 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
DHX40Q8IX18 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
DHX40Q8IX18 BX255925.1-201ENST00000566954 1854 ntBASIC28.78■■■□□ 2.2
DHX40Q8IX18 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
DHX40Q8IX18 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.78■■■□□ 2.2
DHX40Q8IX18 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.78■■■□□ 2.2
DHX40Q8IX18 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
DHX40Q8IX18 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
DHX40Q8IX18 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.77■■■□□ 2.2
DHX40Q8IX18 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
DHX40Q8IX18 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
DHX40Q8IX18 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.77■■■□□ 2.2
DHX40Q8IX18 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
DHX40Q8IX18 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
DHX40Q8IX18 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
DHX40Q8IX18 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.75■■■□□ 2.19
DHX40Q8IX18 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.75■■■□□ 2.19
DHX40Q8IX18 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
DHX40Q8IX18 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
DHX40Q8IX18 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
DHX40Q8IX18 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.74■■■□□ 2.19
DHX40Q8IX18 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
DHX40Q8IX18 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
DHX40Q8IX18 AP004833.2-201ENST00000532228 1454 ntBASIC28.72■■■□□ 2.19
DHX40Q8IX18 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
DHX40Q8IX18 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
DHX40Q8IX18 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
DHX40Q8IX18 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.71■■■□□ 2.19
DHX40Q8IX18 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
DHX40Q8IX18 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
DHX40Q8IX18 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
DHX40Q8IX18 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.7■■■□□ 2.19
DHX40Q8IX18 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.7■■■□□ 2.19
DHX40Q8IX18 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
DHX40Q8IX18 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.69■■■□□ 2.18
DHX40Q8IX18 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.68■■■□□ 2.18
DHX40Q8IX18 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
DHX40Q8IX18 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
DHX40Q8IX18 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
DHX40Q8IX18 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
DHX40Q8IX18 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
DHX40Q8IX18 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.66■■■□□ 2.18
DHX40Q8IX18 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
DHX40Q8IX18 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
DHX40Q8IX18 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
DHX40Q8IX18 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
DHX40Q8IX18 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
DHX40Q8IX18 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.65■■■□□ 2.18
DHX40Q8IX18 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.65■■■□□ 2.18
DHX40Q8IX18 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.65■■■□□ 2.18
DHX40Q8IX18 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
DHX40Q8IX18 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
DHX40Q8IX18 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
DHX40Q8IX18 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
DHX40Q8IX18 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.64■■■□□ 2.18
DHX40Q8IX18 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.64■■■□□ 2.18
DHX40Q8IX18 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
DHX40Q8IX18 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.63■■■□□ 2.17
DHX40Q8IX18 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
DHX40Q8IX18 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
DHX40Q8IX18 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.62■■■□□ 2.17
DHX40Q8IX18 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
DHX40Q8IX18 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
DHX40Q8IX18 AC127502.1-201ENST00000399971 1502 ntBASIC28.61■■■□□ 2.17
DHX40Q8IX18 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.61■■■□□ 2.17
DHX40Q8IX18 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
DHX40Q8IX18 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms