Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.83■■□□□ 1.41
CPSF4LA6NMK7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPSF4LA6NMK7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPSF4LA6NMK7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPSF4LA6NMK7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
CPSF4LA6NMK7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPSF4LA6NMK7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CPSF4LA6NMK7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPSF4LA6NMK7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF4LA6NMK7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CPSF4LA6NMK7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF4LA6NMK7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPSF4LA6NMK7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.8■■□□□ 1.4
CPSF4LA6NMK7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPSF4LA6NMK7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CPSF4LA6NMK7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.79■■□□□ 1.4
CPSF4LA6NMK7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CPSF4LA6NMK7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF4LA6NMK7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF4LA6NMK7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF4LA6NMK7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.78■■□□□ 1.4
CPSF4LA6NMK7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPSF4LA6NMK7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPSF4LA6NMK7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.77■■□□□ 1.4
CPSF4LA6NMK7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CPSF4LA6NMK7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.76■■□□□ 1.39
CPSF4LA6NMK7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CPSF4LA6NMK7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CPSF4LA6NMK7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.76■■□□□ 1.39
CPSF4LA6NMK7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF4LA6NMK7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF4LA6NMK7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPSF4LA6NMK7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF4LA6NMK7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF4LA6NMK7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CPSF4LA6NMK7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CPSF4LA6NMK7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPSF4LA6NMK7 AC127502.1-201ENST00000399971 1502 ntBASIC23.74■■□□□ 1.39
CPSF4LA6NMK7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF4LA6NMK7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CPSF4LA6NMK7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF4LA6NMK7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CPSF4LA6NMK7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CPSF4LA6NMK7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.72■■□□□ 1.39
CPSF4LA6NMK7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF4LA6NMK7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPSF4LA6NMK7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.71■■□□□ 1.39
CPSF4LA6NMK7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPSF4LA6NMK7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.71■■□□□ 1.39
CPSF4LA6NMK7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.71■■□□□ 1.39
CPSF4LA6NMK7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPSF4LA6NMK7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CPSF4LA6NMK7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPSF4LA6NMK7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPSF4LA6NMK7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPSF4LA6NMK7 MIR762-201ENST00000390236 83 ntBASIC23.69■■□□□ 1.38
CPSF4LA6NMK7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.69■■□□□ 1.38
CPSF4LA6NMK7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.68■■□□□ 1.38
CPSF4LA6NMK7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.68■■□□□ 1.38
CPSF4LA6NMK7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CPSF4LA6NMK7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPSF4LA6NMK7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CPSF4LA6NMK7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.67■■□□□ 1.38
CPSF4LA6NMK7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.67■■□□□ 1.38
CPSF4LA6NMK7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CPSF4LA6NMK7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPSF4LA6NMK7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPSF4LA6NMK7 AP004833.2-201ENST00000532228 1454 ntBASIC23.66■■□□□ 1.38
CPSF4LA6NMK7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPSF4LA6NMK7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPSF4LA6NMK7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.65■■□□□ 1.38
CPSF4LA6NMK7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.65■■□□□ 1.38
CPSF4LA6NMK7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CPSF4LA6NMK7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPSF4LA6NMK7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CPSF4LA6NMK7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CPSF4LA6NMK7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CPSF4LA6NMK7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.64■■□□□ 1.37
CPSF4LA6NMK7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.64■■□□□ 1.37
CPSF4LA6NMK7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPSF4LA6NMK7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CPSF4LA6NMK7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.63■■□□□ 1.37
CPSF4LA6NMK7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPSF4LA6NMK7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CPSF4LA6NMK7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPSF4LA6NMK7 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.62■■□□□ 1.37
CPSF4LA6NMK7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.62■■□□□ 1.37
CPSF4LA6NMK7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPSF4LA6NMK7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPSF4LA6NMK7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.61■■□□□ 1.37
CPSF4LA6NMK7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.61■■□□□ 1.37
CPSF4LA6NMK7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPSF4LA6NMK7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CPSF4LA6NMK7 SUZ12P1-203ENST00000578195 985 ntBASIC23.59■■□□□ 1.37
CPSF4LA6NMK7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPSF4LA6NMK7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CPSF4LA6NMK7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPSF4LA6NMK7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPSF4LA6NMK7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CPSF4LA6NMK7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms