Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
TRDV1A0A1B0GX56 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRDV1A0A1B0GX56 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRDV1A0A1B0GX56 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRDV1A0A1B0GX56 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRDV1A0A1B0GX56 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.89■■□□□ 1.26
TRDV1A0A1B0GX56 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.89■■□□□ 1.25
TRDV1A0A1B0GX56 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRDV1A0A1B0GX56 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.88■■□□□ 1.25
TRDV1A0A1B0GX56 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.88■■□□□ 1.25
TRDV1A0A1B0GX56 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.88■■□□□ 1.25
TRDV1A0A1B0GX56 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
TRDV1A0A1B0GX56 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRDV1A0A1B0GX56 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRDV1A0A1B0GX56 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRDV1A0A1B0GX56 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.86■■□□□ 1.25
TRDV1A0A1B0GX56 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRDV1A0A1B0GX56 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.85■■□□□ 1.25
TRDV1A0A1B0GX56 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TRDV1A0A1B0GX56 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRDV1A0A1B0GX56 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRDV1A0A1B0GX56 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRDV1A0A1B0GX56 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
TRDV1A0A1B0GX56 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRDV1A0A1B0GX56 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
TRDV1A0A1B0GX56 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRDV1A0A1B0GX56 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.84■■□□□ 1.25
TRDV1A0A1B0GX56 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRDV1A0A1B0GX56 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
TRDV1A0A1B0GX56 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
TRDV1A0A1B0GX56 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
TRDV1A0A1B0GX56 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRDV1A0A1B0GX56 ZNRF2P1-201ENST00000441407 443 ntBASIC22.81■■□□□ 1.24
TRDV1A0A1B0GX56 AC010864.1-201ENST00000609407 1511 ntBASIC22.81■■□□□ 1.24
TRDV1A0A1B0GX56 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.81■■□□□ 1.24
TRDV1A0A1B0GX56 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.8■■□□□ 1.24
TRDV1A0A1B0GX56 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
TRDV1A0A1B0GX56 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
TRDV1A0A1B0GX56 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.8■■□□□ 1.24
TRDV1A0A1B0GX56 AL031258.1-201ENST00000623562 325 ntBASIC22.79■■□□□ 1.24
TRDV1A0A1B0GX56 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRDV1A0A1B0GX56 WASH5P-204ENST00000632292 975 ntBASIC22.78■■□□□ 1.24
TRDV1A0A1B0GX56 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TRDV1A0A1B0GX56 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRDV1A0A1B0GX56 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.77■■□□□ 1.24
TRDV1A0A1B0GX56 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.77■■□□□ 1.24
TRDV1A0A1B0GX56 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRDV1A0A1B0GX56 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.76■■□□□ 1.23
TRDV1A0A1B0GX56 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
TRDV1A0A1B0GX56 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.76■■□□□ 1.23
TRDV1A0A1B0GX56 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRDV1A0A1B0GX56 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRDV1A0A1B0GX56 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRDV1A0A1B0GX56 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
TRDV1A0A1B0GX56 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRDV1A0A1B0GX56 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
TRDV1A0A1B0GX56 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRDV1A0A1B0GX56 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRDV1A0A1B0GX56 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TRDV1A0A1B0GX56 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRDV1A0A1B0GX56 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRDV1A0A1B0GX56 AP004833.2-201ENST00000532228 1454 ntBASIC22.73■■□□□ 1.23
TRDV1A0A1B0GX56 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRDV1A0A1B0GX56 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRDV1A0A1B0GX56 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRDV1A0A1B0GX56 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.7■■□□□ 1.23
TRDV1A0A1B0GX56 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRDV1A0A1B0GX56 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRDV1A0A1B0GX56 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
TRDV1A0A1B0GX56 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRDV1A0A1B0GX56 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.69■■□□□ 1.22
TRDV1A0A1B0GX56 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
TRDV1A0A1B0GX56 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.69■■□□□ 1.22
TRDV1A0A1B0GX56 LINC01003-201ENST00000564834 1764 ntBASIC22.69■■□□□ 1.22
TRDV1A0A1B0GX56 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.69■■□□□ 1.22
TRDV1A0A1B0GX56 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRDV1A0A1B0GX56 AL449106.1-201ENST00000608517 1980 ntBASIC22.69■■□□□ 1.22
TRDV1A0A1B0GX56 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.68■■□□□ 1.22
TRDV1A0A1B0GX56 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.67■■□□□ 1.22
TRDV1A0A1B0GX56 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.67■■□□□ 1.22
TRDV1A0A1B0GX56 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.66■■□□□ 1.22
TRDV1A0A1B0GX56 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TRDV1A0A1B0GX56 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.65■■□□□ 1.22
TRDV1A0A1B0GX56 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRDV1A0A1B0GX56 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
TRDV1A0A1B0GX56 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRDV1A0A1B0GX56 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRDV1A0A1B0GX56 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRDV1A0A1B0GX56 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.64■■□□□ 1.21
TRDV1A0A1B0GX56 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms