Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRBV10-1A0A0K0K1A3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.25■□□□□ 0.51
TRBV10-1A0A0K0K1A3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV10-1A0A0K0K1A3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.25■□□□□ 0.51
TRBV10-1A0A0K0K1A3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV10-1A0A0K0K1A3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV10-1A0A0K0K1A3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV10-1A0A0K0K1A3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV10-1A0A0K0K1A3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRBV10-1A0A0K0K1A3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV10-1A0A0K0K1A3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV10-1A0A0K0K1A3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV10-1A0A0K0K1A3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TRBV10-1A0A0K0K1A3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV10-1A0A0K0K1A3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV10-1A0A0K0K1A3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV10-1A0A0K0K1A3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRBV10-1A0A0K0K1A3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TRBV10-1A0A0K0K1A3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV10-1A0A0K0K1A3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV10-1A0A0K0K1A3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV10-1A0A0K0K1A3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV10-1A0A0K0K1A3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV10-1A0A0K0K1A3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV10-1A0A0K0K1A3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV10-1A0A0K0K1A3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV10-1A0A0K0K1A3 AC127502.1-201ENST00000399971 1502 ntBASIC18.2■□□□□ 0.5
TRBV10-1A0A0K0K1A3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV10-1A0A0K0K1A3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV10-1A0A0K0K1A3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV10-1A0A0K0K1A3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV10-1A0A0K0K1A3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV10-1A0A0K0K1A3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV10-1A0A0K0K1A3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.18■□□□□ 0.5
TRBV10-1A0A0K0K1A3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRBV10-1A0A0K0K1A3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRBV10-1A0A0K0K1A3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV10-1A0A0K0K1A3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV10-1A0A0K0K1A3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV10-1A0A0K0K1A3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.17■□□□□ 0.5
TRBV10-1A0A0K0K1A3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV10-1A0A0K0K1A3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV10-1A0A0K0K1A3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV10-1A0A0K0K1A3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV10-1A0A0K0K1A3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV10-1A0A0K0K1A3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRBV10-1A0A0K0K1A3 MIR762-201ENST00000390236 83 ntBASIC18.16■□□□□ 0.5
TRBV10-1A0A0K0K1A3 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.16■□□□□ 0.5
TRBV10-1A0A0K0K1A3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV10-1A0A0K0K1A3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV10-1A0A0K0K1A3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV10-1A0A0K0K1A3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV10-1A0A0K0K1A3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV10-1A0A0K0K1A3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV10-1A0A0K0K1A3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV10-1A0A0K0K1A3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV10-1A0A0K0K1A3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.15■□□□□ 0.5
TRBV10-1A0A0K0K1A3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRBV10-1A0A0K0K1A3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TRBV10-1A0A0K0K1A3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV10-1A0A0K0K1A3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV10-1A0A0K0K1A3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV10-1A0A0K0K1A3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV10-1A0A0K0K1A3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV10-1A0A0K0K1A3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV10-1A0A0K0K1A3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV10-1A0A0K0K1A3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV10-1A0A0K0K1A3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV10-1A0A0K0K1A3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV10-1A0A0K0K1A3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRBV10-1A0A0K0K1A3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV10-1A0A0K0K1A3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV10-1A0A0K0K1A3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV10-1A0A0K0K1A3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRBV10-1A0A0K0K1A3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV10-1A0A0K0K1A3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV10-1A0A0K0K1A3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV10-1A0A0K0K1A3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV10-1A0A0K0K1A3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV10-1A0A0K0K1A3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV10-1A0A0K0K1A3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV10-1A0A0K0K1A3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV10-1A0A0K0K1A3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV10-1A0A0K0K1A3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.1■□□□□ 0.49
TRBV10-1A0A0K0K1A3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV10-1A0A0K0K1A3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV10-1A0A0K0K1A3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV10-1A0A0K0K1A3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRBV10-1A0A0K0K1A3 BX255925.1-201ENST00000566954 1854 ntBASIC18.09■□□□□ 0.49
TRBV10-1A0A0K0K1A3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV10-1A0A0K0K1A3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV10-1A0A0K0K1A3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV10-1A0A0K0K1A3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TRBV10-1A0A0K0K1A3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.08■□□□□ 0.48
TRBV10-1A0A0K0K1A3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.08■□□□□ 0.48
TRBV10-1A0A0K0K1A3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.08■□□□□ 0.48
TRBV10-1A0A0K0K1A3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV10-1A0A0K0K1A3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV10-1A0A0K0K1A3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV10-1A0A0K0K1A3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms