Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDH20Q9HBT6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 AP005212.1-201ENST00000581547 1997 ntBASIC17.44■□□□□ 0.38
CDH20Q9HBT6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 GABARAPL3-202ENST00000624044 1851 ntBASIC17.44■□□□□ 0.38
CDH20Q9HBT6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH20Q9HBT6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 HLA-G-202ENST00000376815 851 ntBASIC17.43■□□□□ 0.38
CDH20Q9HBT6 HLA-G-203ENST00000376818 1127 ntBASIC17.43■□□□□ 0.38
CDH20Q9HBT6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH20Q9HBT6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 AC092368.3-202ENST00000574180 1591 ntBASIC17.42■□□□□ 0.38
CDH20Q9HBT6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 RNA5SP413-201ENST00000516373 109 ntBASIC17.42■□□□□ 0.38
CDH20Q9HBT6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 AC060766.5-201ENST00000590539 871 ntBASIC17.42■□□□□ 0.38
CDH20Q9HBT6 HLA-B-256ENST00000639848 1089 ntBASIC17.42■□□□□ 0.38
CDH20Q9HBT6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH20Q9HBT6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH20Q9HBT6 KRT18P6-201ENST00000555540 1265 ntBASIC17.41■□□□□ 0.38
CDH20Q9HBT6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms