Protein–RNA interactions for Protein: P53158

KXD1, Biogenesis of lysosome-related organelles complex 1 subunit KXD1, yeastyeast

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
KXD1P53158 UBR2YLR024C 5619 nt2.28□□□□□ -2.04
KXD1P53158 VPS13YLL040C 9435 nt2.28□□□□□ -2.05
KXD1P53158 MSB1YOR188W 3414 nt2.27□□□□□ -2.05
KXD1P53158 KCS1YDR017C 3153 nt2.26□□□□□ -2.05
KXD1P53158 KAP122YGL016W 3246 nt2.25□□□□□ -2.05
KXD1P53158 DNF1YER166W 4716 nt2.25□□□□□ -2.05
KXD1P53158 YOL098CYOL098C 3114 nt2.24□□□□□ -2.05
KXD1P53158 PKH3YDR466W 2697 nt2.23□□□□□ -2.05
KXD1P53158 SCD5YOR329C 2619 nt2.22□□□□□ -2.05
KXD1P53158 ATG9YDL149W 2994 nt2.22□□□□□ -2.05
KXD1P53158 YKL225WYKL225W 348 nt2.22□□□□□ -2.05
KXD1P53158 CSF1YLR087C 8877 nt2.22□□□□□ -2.05
KXD1P53158 STH1YIL126W 4080 nt2.2□□□□□ -2.06
KXD1P53158 SPF1YEL031W 3648 nt2.2□□□□□ -2.06
KXD1P53158 STO1YMR125W 2586 nt2.19□□□□□ -2.06
KXD1P53158 NUP170YBL079W 4509 nt2.18□□□□□ -2.06
KXD1P53158 YER078W-AYER078W-A 165 nt2.18□□□□□ -2.06
KXD1P53158 YKL096C-BYKL096C-B 150 nt2.18□□□□□ -2.06
KXD1P53158 HER1YOR227W 3741 nt2.18□□□□□ -2.06
KXD1P53158 SEC3YER008C 4011 nt2.17□□□□□ -2.06
KXD1P53158 tD(GUC)QtD(GUC)Q 75 nt2.17□□□□□ -2.06
KXD1P53158 YLR149C-AYLR149C-A 87 nt2.17□□□□□ -2.06
KXD1P53158 SMC4YLR086W 4257 nt2.17□□□□□ -2.06
KXD1P53158 TFC3YAL001C 3483 nt2.16□□□□□ -2.06
KXD1P53158 MGA2YIR033W 3342 nt2.16□□□□□ -2.06
KXD1P53158 SKI3YPR189W 4299 nt2.16□□□□□ -2.06
KXD1P53158 YPL060C-AYPL060C-A 3315 nt2.16□□□□□ -2.06
KXD1P53158 SEC31YDL195W 3822 nt2.14□□□□□ -2.07
KXD1P53158 ANS1YHR126C 480 nt2.13□□□□□ -2.07
KXD1P53158 YLR299C-AYLR299C-A 93 nt2.13□□□□□ -2.07
KXD1P53158 BNI1YNL271C 5862 nt2.13□□□□□ -2.07
KXD1P53158 CDC25YLR310C 4770 nt2.13□□□□□ -2.07
KXD1P53158 YPR160W-AYPR160W-A 81 nt2.12□□□□□ -2.07
KXD1P53158 BPH1YCR032W 6504 nt2.12□□□□□ -2.07
KXD1P53158 SEC16YPL085W 6588 nt2.12□□□□□ -2.07
KXD1P53158 TMA7YLR262C-A 195 nt2.11□□□□□ -2.07
KXD1P53158 USO1YDL058W 5373 nt2.1□□□□□ -2.07
KXD1P53158 MYO4YAL029C 4416 nt2.09□□□□□ -2.07
KXD1P53158 MSH3YCR092C 3057 nt2.09□□□□□ -2.07
KXD1P53158 snR75snR75 89 nt2.09□□□□□ -2.07
KXD1P53158 SEC8YPR055W 3198 nt2.09□□□□□ -2.08
KXD1P53158 GEA2YEL022W 4380 nt2.09□□□□□ -2.08
KXD1P53158 BEM3YPL115C 3387 nt2.09□□□□□ -2.08
KXD1P53158 UTP22YGR090W 3714 nt2.08□□□□□ -2.08
KXD1P53158 IRC20YLR247C 4671 nt2.08□□□□□ -2.08
KXD1P53158 tN(GUU)QtN(GUU)Q 71 nt2.08□□□□□ -2.08
KXD1P53158 EST1YLR233C 2100 nt2.07□□□□□ -2.08
KXD1P53158 TRM732YMR259C 4263 nt2.07□□□□□ -2.08
KXD1P53158 ULP2YIL031W 3105 nt2.06□□□□□ -2.08
KXD1P53158 UBP2YOR124C 3819 nt2.06□□□□□ -2.08
KXD1P53158 YDL159C-BYDL159C-B 177 nt2.04□□□□□ -2.08
KXD1P53158 APL3YBL037W 3078 nt2.04□□□□□ -2.08
KXD1P53158 NST1YNL091W 3723 nt2.04□□□□□ -2.08
KXD1P53158 PET127YOR017W 2403 nt2.03□□□□□ -2.08
KXD1P53158 YSP1YHR155W 3687 nt2.03□□□□□ -2.08
KXD1P53158 PRP16YKR086W 3216 nt2.03□□□□□ -2.08
KXD1P53158 YLR399W-AYLR399W-A 105 nt2.03□□□□□ -2.08
KXD1P53158 TOR2YKL203C 7425 nt2.03□□□□□ -2.08
KXD1P53158 MSN5YDR335W 3675 nt2.03□□□□□ -2.09
KXD1P53158 SWI4YER111C 3282 nt2.02□□□□□ -2.09
KXD1P53158 snR69snR69 101 nt2.02□□□□□ -2.09
KXD1P53158 BRE1YDL074C 2103 nt2.02□□□□□ -2.09
KXD1P53158 YDL159W-AYDL159W-A 132 nt2.01□□□□□ -2.09
KXD1P53158 snR38snR38 95 nt2□□□□□ -2.09
KXD1P53158 MON2YNL297C 4911 nt2□□□□□ -2.09
KXD1P53158 AI1Q0050 2505 nt1.99□□□□□ -2.09
KXD1P53158 YMR045CYMR045C 5268 nt1.98□□□□□ -2.09
KXD1P53158 RPL41AYDL184C 78 nt1.98□□□□□ -2.09
KXD1P53158 YML054C-AYML054C-A 159 nt1.98□□□□□ -2.09
KXD1P53158 DGR1YNL130C-A 147 nt1.98□□□□□ -2.09
KXD1P53158 NEO1YIL048W 3456 nt1.96□□□□□ -2.1
KXD1P53158 CSE1YGL238W 2883 nt1.96□□□□□ -2.1
KXD1P53158 YHR180C-BYHR180C-B 105 nt1.96□□□□□ -2.1
KXD1P53158 RDS3YPR094W 324 nt1.95□□□□□ -2.1
KXD1P53158 YBR296C-AYBR296C-A 120 nt1.94□□□□□ -2.1
KXD1P53158 SPP41YDR464W 4308 nt1.94□□□□□ -2.1
KXD1P53158 NUP145YGL092W 3954 nt1.93□□□□□ -2.1
KXD1P53158 PMD1YER132C 5262 nt1.91□□□□□ -2.1
KXD1P53158 NIP1YMR309C 2439 nt1.91□□□□□ -2.1
KXD1P53158 SKI7YOR076C 2244 nt1.91□□□□□ -2.1
KXD1P53158 SXM1YDR395W 2835 nt1.9□□□□□ -2.11
KXD1P53158 NUP188YML103C 4968 nt1.88□□□□□ -2.11
KXD1P53158 FAB1YFR019W 6837 nt1.86□□□□□ -2.11
KXD1P53158 YGR122C-AYGR122C-A 129 nt1.85□□□□□ -2.11
KXD1P53158 FKS1YLR342W 5631 nt1.85□□□□□ -2.11
KXD1P53158 CDC39YCR093W 6327 nt1.84□□□□□ -2.11
KXD1P53158 HUG1YML058W-A 207 nt1.83□□□□□ -2.12
KXD1P53158 tT(UGU)HtT(UGU)H 72 nt1.82□□□□□ -2.12
KXD1P53158 YMR247W-AYMR247W-A 144 nt1.81□□□□□ -2.12
KXD1P53158 PAU12YGR294W 363 nt1.79□□□□□ -2.12
KXD1P53158 YJL077W-AYJL077W-A 87 nt1.79□□□□□ -2.12
KXD1P53158 YMR272W-BYMR272W-B 108 nt1.79□□□□□ -2.12
KXD1P53158 YOR093CYOR093C 4947 nt1.79□□□□□ -2.12
KXD1P53158 BST1YFL025C 3090 nt1.78□□□□□ -2.12
KXD1P53158 BUL2YML111W 2763 nt1.77□□□□□ -2.13
KXD1P53158 PEP1YBL017C 4740 nt1.77□□□□□ -2.13
KXD1P53158 REV3YPL167C 4515 nt1.77□□□□□ -2.13
KXD1P53158 CFT1YDR301W 4074 nt1.76□□□□□ -2.13
KXD1P53158 YHR214C-BYHR214C-B 5382 nt1.76□□□□□ -2.13
KXD1P53158 SIP4YJL089W 2490 nt1.76□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 244.3 ms