Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC007225.1-201ENST00000566331 1836 ntBASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 LTB4R2-202ENST00000528054 3092 ntBASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRBV23-1A0A0A0MS06 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 HLA-L-209ENST00000420110 1011 ntBASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 AL355472.2-201ENST00000422958 438 ntBASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
TRBV23-1A0A0A0MS06 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 AC073210.2-201ENST00000430369 194 ntBASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 FP700111.2-201ENST00000619190 1892 ntBASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRBV23-1A0A0A0MS06 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV23-1A0A0A0MS06 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms