RNA–Protein interactions for RNA: ENST00000554054.5

SKOR1-203, Transcript of SKI family transcriptional corepressor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKOR1, Length 3,620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1-203ENST00000554054 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
SKOR1-203ENST00000554054 DCAF8L2P0C7V8 631 aa30.83■■■□□ 2.53
SKOR1-203ENST00000554054 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.47
SKOR1-203ENST00000554054 SUPT5HO00267 1087 aaKnown RBP30.33■■■□□ 2.45
SKOR1-203ENST00000554054 PCGF6Q9BYE7 350 aa30.07■■■□□ 2.4
SKOR1-203ENST00000554054 PPARGC1BQ86YN6 1023 aaKnown RBP30■■■□□ 2.39
SKOR1-203ENST00000554054 HRCP23327 699 aa29.78■■■□□ 2.36
SKOR1-203ENST00000554054 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
SKOR1-203ENST00000554054 PELP1Q8IZL8 1130 aaKnown RBP28.87■■■□□ 2.21
SKOR1-203ENST00000554054 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
SKOR1-203ENST00000554054 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
SKOR1-203ENST00000554054 SCAF1Q9H7N4 1312 aaKnown RBP28.46■■■□□ 2.15
SKOR1-203ENST00000554054 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
SKOR1-203ENST00000554054 ZCCHC6Q5VYS8 1495 aaKnown RBP28.38■■■□□ 2.13
SKOR1-203ENST00000554054 MYO15BQ96JP2 1530 aa28.36■■■□□ 2.13
SKOR1-203ENST00000554054 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.11
SKOR1-203ENST00000554054 TTBK1Q5TCY1 1321 aaPredicted RBP28.23■■■□□ 2.11
SKOR1-203ENST00000554054 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
SKOR1-203ENST00000554054 ABCC9O60706 1549 aa28.13■■■□□ 2.09
SKOR1-203ENST00000554054 YTHDC1Q96MU7 727 aaKnown RBP28.08■■■□□ 2.09
SKOR1-203ENST00000554054 GTF3C3Q9Y5Q9 886 aa27.98■■■□□ 2.07
SKOR1-203ENST00000554054 ZEB1P37275 1124 aaPredicted RBP27.96■■■□□ 2.07
SKOR1-203ENST00000554054 CCER1Q8TC90 406 aaPredicted RBP27.86■■■□□ 2.05
SKOR1-203ENST00000554054 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
SKOR1-203ENST00000554054 CENPBP07199 599 aaPredicted RBP27.82■■■□□ 2.04
SKOR1-203ENST00000554054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.8■■■□□ 2.04
SKOR1-203ENST00000554054 ACIN1Q9UKV3 1341 aaKnown RBP27.72■■■□□ 2.03
SKOR1-203ENST00000554054 MYT1Q01538 1121 aa27.66■■■□□ 2.02
SKOR1-203ENST00000554054 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
SKOR1-203ENST00000554054 SCRIBQ14160 1630 aa27.57■■■□□ 2
SKOR1-203ENST00000554054 DIEXFQ68CQ4 756 aaKnown RBP27.53■■■□□ 2
SKOR1-203ENST00000554054 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
SKOR1-203ENST00000554054 DCAF1Q9Y4B6 1507 aa27.32■■□□□ 1.96
SKOR1-203ENST00000554054 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
SKOR1-203ENST00000554054 RANGAP1P46060 587 aaPredicted RBP26.98■■□□□ 1.91
SKOR1-203ENST00000554054 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
SKOR1-203ENST00000554054 HNRNPUL2Q1KMD3 747 aaKnown RBP26.79■■□□□ 1.88
SKOR1-203ENST00000554054 BCANQ96GW7 911 aa26.78■■□□□ 1.88
SKOR1-203ENST00000554054 MIER1Q8N108 512 aa26.73■■□□□ 1.87
SKOR1-203ENST00000554054 UBTFP17480 764 aaKnown RBP26.73■■□□□ 1.87
SKOR1-203ENST00000554054 ZNF316A6NFI3 1004 aaPredicted RBP26.67■■□□□ 1.86
SKOR1-203ENST00000554054 NACADO15069 1562 aa26.65■■□□□ 1.86
SKOR1-203ENST00000554054 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
SKOR1-203ENST00000554054 MROH2BQ7Z745 1585 aa26.56■■□□□ 1.84
SKOR1-203ENST00000554054 BCL11AQ9H165 835 aa26.46■■□□□ 1.83
SKOR1-203ENST00000554054 WIZO95785 1651 aa26.31■■□□□ 1.8
SKOR1-203ENST00000554054 APLP2Q06481 763 aa26.26■■□□□ 1.79
SKOR1-203ENST00000554054 ERICH6Q7L0X2 663 aa26.25■■□□□ 1.79
SKOR1-203ENST00000554054 ANP32EQ9BTT0 268 aa26.21■■□□□ 1.79
SKOR1-203ENST00000554054 CSRNP3Q8WYN3 585 aa26.19■■□□□ 1.78
SKOR1-203ENST00000554054 SUPT16HQ9Y5B9 1047 aaKnown RBP26.15■■□□□ 1.78
SKOR1-203ENST00000554054 ITGAEP38570 1179 aa26.12■■□□□ 1.77
SKOR1-203ENST00000554054 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
SKOR1-203ENST00000554054 NEFLP07196 543 aa26.06■■□□□ 1.76
SKOR1-203ENST00000554054 FKBP8Q14318 412 aa26.04■■□□□ 1.76
SKOR1-203ENST00000554054 TSHZ2Q9NRE2 1034 aa26.03■■□□□ 1.76
SKOR1-203ENST00000554054 ABCC8Q09428 1581 aa26■■□□□ 1.75
SKOR1-203ENST00000554054 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
SKOR1-203ENST00000554054 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
SKOR1-203ENST00000554054 SOGA1O94964 1423 aa25.88■■□□□ 1.73
SKOR1-203ENST00000554054 TRIM52Q96A61 297 aa25.79■■□□□ 1.72
SKOR1-203ENST00000554054 KCNH8Q96L42 1107 aa25.79■■□□□ 1.72
SKOR1-203ENST00000554054 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
SKOR1-203ENST00000554054 IRX6P78412 446 aaPredicted RBP25.75■■□□□ 1.71
SKOR1-203ENST00000554054 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
SKOR1-203ENST00000554054 HIRIP3Q9BW71 556 aaPredicted RBP25.71■■□□□ 1.71
SKOR1-203ENST00000554054 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
SKOR1-203ENST00000554054 TOP2AP11388 1531 aaKnown RBP25.67■■□□□ 1.7
SKOR1-203ENST00000554054 RUSC2Q8N2Y8 1516 aa25.66■■□□□ 1.7
SKOR1-203ENST00000554054 CNGB1Q14028 1251 aaPredicted RBP25.66■■□□□ 1.7
SKOR1-203ENST00000554054 DDX10Q13206 875 aaKnown RBP25.63■■□□□ 1.69
SKOR1-203ENST00000554054 RBM19Q9Y4C8 960 aaKnown RBP25.6■■□□□ 1.69
SKOR1-203ENST00000554054 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
SKOR1-203ENST00000554054 P3H3Q8IVL6 736 aa25.57■■□□□ 1.68
SKOR1-203ENST00000554054 NBR1Q14596 966 aa25.55■■□□□ 1.68
SKOR1-203ENST00000554054 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
SKOR1-203ENST00000554054 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
SKOR1-203ENST00000554054 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
SKOR1-203ENST00000554054 CDK11AQ9UQ88 783 aaPredicted RBP25.38■■□□□ 1.65
SKOR1-203ENST00000554054 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
SKOR1-203ENST00000554054 TNIKQ9UKE5 1360 aa25.36■■□□□ 1.65
SKOR1-203ENST00000554054 CLIP1P30622 1438 aa25.36■■□□□ 1.65
SKOR1-203ENST00000554054 CLSPNQ9HAW4 1339 aa25.35■■□□□ 1.65
SKOR1-203ENST00000554054 RTN4Q9NQC3 1192 aaKnown RBP25.34■■□□□ 1.65
SKOR1-203ENST00000554054 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
SKOR1-203ENST00000554054 SENP3-EIF4A1A0A087X0R7 540 aa25.27■■□□□ 1.64
SKOR1-203ENST00000554054 EEA1Q15075 1411 aa25.23■■□□□ 1.63
SKOR1-203ENST00000554054 PRKCSHP14314 528 aaPredicted RBP25.23■■□□□ 1.63
SKOR1-203ENST00000554054 ANP32CO43423 234 aa25.22■■□□□ 1.63
SKOR1-203ENST00000554054 HNRNPUQ00839 825 aaKnown RBP eCLIP25.22■■□□□ 1.63
SKOR1-203ENST00000554054 ARID3CA6NKF2 412 aa25.2■■□□□ 1.63
SKOR1-203ENST00000554054 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.62
SKOR1-203ENST00000554054 DEKP35659 375 aaKnown RBP25.18■■□□□ 1.62
SKOR1-203ENST00000554054 CCDC136Q96JN2 1154 aa25.16■■□□□ 1.62
SKOR1-203ENST00000554054 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
SKOR1-203ENST00000554054 RTL5Q5HYW3 569 aaPredicted RBP25.14■■□□□ 1.61
SKOR1-203ENST00000554054 RAPGEF2Q9Y4G8 1499 aa25.13■■□□□ 1.61
SKOR1-203ENST00000554054 MSH5O43196 834 aa25.12■■□□□ 1.61
SKOR1-203ENST00000554054 POLR3GLQ9BT43 218 aa25.08■■□□□ 1.61
SKOR1-203ENST00000554054 SIN3AQ96ST3 1273 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms