Protein–RNA interactions for Protein: Q08417

RSB1, Sphingoid long-chain base transporter RSB1, yeastyeast

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSB1Q08417 GYP5YPL249C 2685 nt2.07□□□□□ -2.08
RSB1Q08417 YDL206WYDL206W 2289 nt2.07□□□□□ -2.08
RSB1Q08417 STB6YKL072W 2301 nt2.07□□□□□ -2.08
RSB1Q08417 KOG1YHR186C 4674 nt2.06□□□□□ -2.08
RSB1Q08417 YAL067W-AYAL067W-A 228 nt2.06□□□□□ -2.08
RSB1Q08417 CMC4YMR194C-B 222 nt2.06□□□□□ -2.08
RSB1Q08417 YNL067W-BYNL067W-B 141 nt2.06□□□□□ -2.08
RSB1Q08417 SEC16YPL085W 6588 nt2.06□□□□□ -2.08
RSB1Q08417 ADR1YDR216W 3972 nt2.06□□□□□ -2.08
RSB1Q08417 BRE1YDL074C 2103 nt2.06□□□□□ -2.08
RSB1Q08417 MSH6YDR097C 3729 nt2.06□□□□□ -2.08
RSB1Q08417 ALY2YJL084C 3141 nt2.05□□□□□ -2.08
RSB1Q08417 LHS1YKL073W 2646 nt2.05□□□□□ -2.08
RSB1Q08417 UFD2YDL190C 2886 nt2.05□□□□□ -2.08
RSB1Q08417 EAF1YDR359C 2949 nt2.05□□□□□ -2.08
RSB1Q08417 YLR419WYLR419W 4308 nt2.05□□□□□ -2.08
RSB1Q08417 YGL182CYGL182C 324 nt2.04□□□□□ -2.08
RSB1Q08417 CHS6YJL099W 2241 nt2.04□□□□□ -2.08
RSB1Q08417 UFD4YKL010C 4452 nt2.04□□□□□ -2.08
RSB1Q08417 SPO24YPR036W-A 204 nt2.03□□□□□ -2.08
RSB1Q08417 TBS1YBR150C 3285 nt2.03□□□□□ -2.08
RSB1Q08417 YCS4YLR272C 3531 nt2.02□□□□□ -2.09
RSB1Q08417 UBP2YOR124C 3819 nt2.02□□□□□ -2.09
RSB1Q08417 IRE1YHR079C 3348 nt2.02□□□□□ -2.09
RSB1Q08417 HER1YOR227W 3741 nt2.01□□□□□ -2.09
RSB1Q08417 SFB2YNL049C 2631 nt2.01□□□□□ -2.09
RSB1Q08417 BFR2YDR299W 1605 nt2.01□□□□□ -2.09
RSB1Q08417 ATG9YDL149W 2994 nt2.01□□□□□ -2.09
RSB1Q08417 PAN2YGL094C 3348 nt2□□□□□ -2.09
RSB1Q08417 SOM1YEL059C-A 225 nt2□□□□□ -2.09
RSB1Q08417 SEY1YOR165W 2331 nt2□□□□□ -2.09
RSB1Q08417 KCS1YDR017C 3153 nt2□□□□□ -2.09
RSB1Q08417 YLL020CYLL020C 306 nt1.99□□□□□ -2.09
RSB1Q08417 RGA1YOR127W 3024 nt1.99□□□□□ -2.09
RSB1Q08417 YGL123C-AYGL123C-A 231 nt1.98□□□□□ -2.09
RSB1Q08417 STF2YGR008C 255 nt1.98□□□□□ -2.09
RSB1Q08417 YBL039C-AYBL039C-A 84 nt1.98□□□□□ -2.09
RSB1Q08417 PDR8YLR266C 2106 nt1.97□□□□□ -2.09
RSB1Q08417 USO1YDL058W 5373 nt1.97□□□□□ -2.09
RSB1Q08417 GCN2YDR283C 4980 nt1.97□□□□□ -2.09
RSB1Q08417 YER172C-AYER172C-A 381 nt1.97□□□□□ -2.09
RSB1Q08417 KIP1YBL063W 3336 nt1.97□□□□□ -2.09
RSB1Q08417 SEC63YOR254C 1992 nt1.96□□□□□ -2.1
RSB1Q08417 FKS1YLR342W 5631 nt1.95□□□□□ -2.1
RSB1Q08417 YOR161W-AYOR161W-A 81 nt1.95□□□□□ -2.1
RSB1Q08417 UTP21YLR409C 2820 nt1.95□□□□□ -2.1
RSB1Q08417 EMC5YIL027C 426 nt1.94□□□□□ -2.1
RSB1Q08417 snR39BsnR39B 96 nt1.94□□□□□ -2.1
RSB1Q08417 COG6YNL041C 2520 nt1.93□□□□□ -2.1
RSB1Q08417 UBR2YLR024C 5619 nt1.93□□□□□ -2.1
RSB1Q08417 COX5BYIL111W 456 nt1.93□□□□□ -2.1
RSB1Q08417 COA6YMR244C-A 315 nt1.93□□□□□ -2.1
RSB1Q08417 RCO1YMR075W 2055 nt1.92□□□□□ -2.1
RSB1Q08417 YGL041C-BYGL041C-B 183 nt1.92□□□□□ -2.1
RSB1Q08417 YHR131W-AYHR131W-A 246 nt1.92□□□□□ -2.1
RSB1Q08417 PEP1YBL017C 4740 nt1.91□□□□□ -2.1
RSB1Q08417 QCR9YGR183C 201 nt1.9□□□□□ -2.11
RSB1Q08417 FAB1YFR019W 6837 nt1.9□□□□□ -2.11
RSB1Q08417 RTP1YMR185W 2946 nt1.9□□□□□ -2.11
RSB1Q08417 RSM22YKL155C 1887 nt1.89□□□□□ -2.11
RSB1Q08417 ANS1YHR126C 480 nt1.89□□□□□ -2.11
RSB1Q08417 YKL100W-AYKL100W-A 90 nt1.89□□□□□ -2.11
RSB1Q08417 YLR422WYLR422W 5799 nt1.89□□□□□ -2.11
RSB1Q08417 MYO4YAL029C 4416 nt1.88□□□□□ -2.11
RSB1Q08417 YAR009CYAR009C 3591 nt1.88□□□□□ -2.11
RSB1Q08417 YMR272W-BYMR272W-B 108 nt1.88□□□□□ -2.11
RSB1Q08417 NUP157YER105C 4176 nt1.88□□□□□ -2.11
RSB1Q08417 UTP8YGR128C 2142 nt1.88□□□□□ -2.11
RSB1Q08417 TAH1YCR060W 336 nt1.87□□□□□ -2.11
RSB1Q08417 YLR041WYLR041W 321 nt1.87□□□□□ -2.11
RSB1Q08417 MMS4YBR098W 2076 nt1.87□□□□□ -2.11
RSB1Q08417 SKI3YPR189W 4299 nt1.86□□□□□ -2.11
RSB1Q08417 RAD50YNL250W 3939 nt1.86□□□□□ -2.11
RSB1Q08417 SEC31YDL195W 3822 nt1.86□□□□□ -2.11
RSB1Q08417 NEO1YIL048W 3456 nt1.86□□□□□ -2.11
RSB1Q08417 RAD9YDR217C 3930 nt1.85□□□□□ -2.11
RSB1Q08417 KAP122YGL016W 3246 nt1.85□□□□□ -2.11
RSB1Q08417 YHR214C-BYHR214C-B 5382 nt1.85□□□□□ -2.11
RSB1Q08417 snR14snR14 160 nt1.85□□□□□ -2.11
RSB1Q08417 TRM732YMR259C 4263 nt1.83□□□□□ -2.12
RSB1Q08417 TMA7YLR262C-A 195 nt1.83□□□□□ -2.12
RSB1Q08417 SLX4YLR135W 2247 nt1.83□□□□□ -2.12
RSB1Q08417 MYO2YOR326W 4725 nt1.83□□□□□ -2.12
RSB1Q08417 ASE1YOR058C 2658 nt1.83□□□□□ -2.12
RSB1Q08417 RPM2YML091C 3609 nt1.83□□□□□ -2.12
RSB1Q08417 tS(GCU)Q1tS(GCU)Q1 86 nt1.82□□□□□ -2.12
RSB1Q08417 YML002WYML002W 2214 nt1.81□□□□□ -2.12
RSB1Q08417 YIL142C-AYIL142C-A 333 nt1.8□□□□□ -2.12
RSB1Q08417 NOP9YJL010C 2001 nt1.79□□□□□ -2.12
RSB1Q08417 ROM2YLR371W 4071 nt1.79□□□□□ -2.12
RSB1Q08417 YDL073WYDL073W 2955 nt1.78□□□□□ -2.12
RSB1Q08417 YDR210WYDR210W 228 nt1.77□□□□□ -2.13
RSB1Q08417 KAP120YPL125W 3099 nt1.77□□□□□ -2.13
RSB1Q08417 SMC4YLR086W 4257 nt1.77□□□□□ -2.13
RSB1Q08417 SET3YKR029C 2256 nt1.77□□□□□ -2.13
RSB1Q08417 SEC3YER008C 4011 nt1.76□□□□□ -2.13
RSB1Q08417 IRC20YLR247C 4671 nt1.76□□□□□ -2.13
RSB1Q08417 tM(CAU)Q2tM(CAU)Q2 78 nt1.75□□□□□ -2.13
RSB1Q08417 SAC3YDR159W 3906 nt1.75□□□□□ -2.13
RSB1Q08417 MON2YNL297C 4911 nt1.74□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 27.6 ms