Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 MMS4YBR098W 2076 nt2.79□□□□□ -1.96
SPB4P25808 HER1YOR227W 3741 nt2.78□□□□□ -1.96
SPB4P25808 ATG9YDL149W 2994 nt2.78□□□□□ -1.96
SPB4P25808 YGL041C-BYGL041C-B 183 nt2.78□□□□□ -1.96
SPB4P25808 YOR055WYOR055W 435 nt2.78□□□□□ -1.96
SPB4P25808 CHC1YGL206C 4962 nt2.78□□□□□ -1.96
SPB4P25808 MSB1YOR188W 3414 nt2.77□□□□□ -1.97
SPB4P25808 TOF1YNL273W 3717 nt2.77□□□□□ -1.97
SPB4P25808 ARP8YOR141C 2646 nt2.77□□□□□ -1.97
SPB4P25808 RTP1YMR185W 2946 nt2.74□□□□□ -1.97
SPB4P25808 NUP170YBL079W 4509 nt2.74□□□□□ -1.97
SPB4P25808 QCR9YGR183C 201 nt2.73□□□□□ -1.97
SPB4P25808 YOR161W-AYOR161W-A 81 nt2.73□□□□□ -1.97
SPB4P25808 YDR098C-BYDR098C-B 5268 nt2.73□□□□□ -1.97
SPB4P25808 YDR210C-DYDR210C-D 5268 nt2.73□□□□□ -1.97
SPB4P25808 YDR316W-BYDR316W-B 5268 nt2.73□□□□□ -1.97
SPB4P25808 YDR365W-BYDR365W-B 5268 nt2.73□□□□□ -1.97
SPB4P25808 YER138CYER138C 5268 nt2.73□□□□□ -1.97
SPB4P25808 YER160CYER160C 5268 nt2.73□□□□□ -1.97
SPB4P25808 YGR038C-BYGR038C-B 5268 nt2.73□□□□□ -1.97
SPB4P25808 YGR161C-DYGR161C-D 5268 nt2.73□□□□□ -1.97
SPB4P25808 YJR027WYJR027W 5268 nt2.73□□□□□ -1.97
SPB4P25808 YLR157C-BYLR157C-B 5268 nt2.73□□□□□ -1.97
SPB4P25808 YML039WYML039W 5268 nt2.73□□□□□ -1.97
SPB4P25808 YML045WYML045W 5268 nt2.73□□□□□ -1.97
SPB4P25808 YMR050CYMR050C 5268 nt2.73□□□□□ -1.97
SPB4P25808 YOL103W-BYOL103W-B 5268 nt2.73□□□□□ -1.97
SPB4P25808 YBR012W-BYBR012W-B 5271 nt2.73□□□□□ -1.97
SPB4P25808 YOR142W-BYOR142W-B 5268 nt2.73□□□□□ -1.97
SPB4P25808 YPL257W-BYPL257W-B 5268 nt2.73□□□□□ -1.97
SPB4P25808 YPR158W-BYPR158W-B 5271 nt2.73□□□□□ -1.97
SPB4P25808 SPF1YEL031W 3648 nt2.72□□□□□ -1.97
SPB4P25808 COA6YMR244C-A 315 nt2.72□□□□□ -1.97
SPB4P25808 KIP1YBL063W 3336 nt2.71□□□□□ -1.97
SPB4P25808 YAR009CYAR009C 3591 nt2.71□□□□□ -1.97
SPB4P25808 REV3YPL167C 4515 nt2.71□□□□□ -1.98
SPB4P25808 YLR041WYLR041W 321 nt2.71□□□□□ -1.98
SPB4P25808 snR39BsnR39B 96 nt2.71□□□□□ -1.98
SPB4P25808 YOR343W-BYOR343W-B 5313 nt2.7□□□□□ -1.98
SPB4P25808 SKI3YPR189W 4299 nt2.7□□□□□ -1.98
SPB4P25808 YHR131W-AYHR131W-A 246 nt2.69□□□□□ -1.98
SPB4P25808 SVL3YPL032C 2478 nt2.69□□□□□ -1.98
SPB4P25808 PDR11YIL013C 4236 nt2.69□□□□□ -1.98
SPB4P25808 TAH1YCR060W 336 nt2.68□□□□□ -1.98
SPB4P25808 DNF1YER166W 4716 nt2.67□□□□□ -1.98
SPB4P25808 YML002WYML002W 2214 nt2.67□□□□□ -1.98
SPB4P25808 RAD50YNL250W 3939 nt2.67□□□□□ -1.98
SPB4P25808 GYP5YPL249C 2685 nt2.66□□□□□ -1.98
SPB4P25808 COG6YNL041C 2520 nt2.65□□□□□ -1.99
SPB4P25808 YJL052C-AYJL052C-A 120 nt2.65□□□□□ -1.99
SPB4P25808 PDR8YLR266C 2106 nt2.65□□□□□ -1.99
SPB4P25808 RCO1YMR075W 2055 nt2.62□□□□□ -1.99
SPB4P25808 BNI1YNL271C 5862 nt2.62□□□□□ -1.99
SPB4P25808 RGA1YOR127W 3024 nt2.61□□□□□ -1.99
SPB4P25808 KAP122YGL016W 3246 nt2.61□□□□□ -1.99
SPB4P25808 CLU1YMR012W 3834 nt2.6□□□□□ -1.99
SPB4P25808 NOP9YJL010C 2001 nt2.6□□□□□ -1.99
SPB4P25808 tM(CAU)Q2tM(CAU)Q2 78 nt2.6□□□□□ -1.99
SPB4P25808 tS(GCU)Q1tS(GCU)Q1 86 nt2.6□□□□□ -1.99
SPB4P25808 YHR180W-AYHR180W-A 183 nt2.6□□□□□ -1.99
SPB4P25808 YIL142C-AYIL142C-A 333 nt2.6□□□□□ -1.99
SPB4P25808 SCD5YOR329C 2619 nt2.6□□□□□ -1.99
SPB4P25808 SLX4YLR135W 2247 nt2.59□□□□□ -1.99
SPB4P25808 SEC3YER008C 4011 nt2.57□□□□□ -2
SPB4P25808 TOR1YJR066W 7413 nt2.57□□□□□ -2
SPB4P25808 KAP120YPL125W 3099 nt2.55□□□□□ -2
SPB4P25808 SEC16YPL085W 6588 nt2.54□□□□□ -2
SPB4P25808 YLR232WYLR232W 348 nt2.54□□□□□ -2
SPB4P25808 VPS13YLL040C 9435 nt2.54□□□□□ -2
SPB4P25808 IRA2YOL081W 9240 nt2.54□□□□□ -2
SPB4P25808 MYO4YAL029C 4416 nt2.53□□□□□ -2
SPB4P25808 KOG1YHR186C 4674 nt2.52□□□□□ -2.01
SPB4P25808 snR14snR14 160 nt2.52□□□□□ -2.01
SPB4P25808 SPP41YDR464W 4308 nt2.51□□□□□ -2.01
SPB4P25808 SMC1YFL008W 3678 nt2.51□□□□□ -2.01
SPB4P25808 YDR210WYDR210W 228 nt2.51□□□□□ -2.01
SPB4P25808 RPL26BYGR034W 384 nt2.51□□□□□ -2.01
SPB4P25808 USO1YDL058W 5373 nt2.51□□□□□ -2.01
SPB4P25808 YDL073WYDL073W 2955 nt2.51□□□□□ -2.01
SPB4P25808 ASE1YOR058C 2658 nt2.51□□□□□ -2.01
SPB4P25808 SET3YKR029C 2256 nt2.51□□□□□ -2.01
SPB4P25808 UBR2YLR024C 5619 nt2.5□□□□□ -2.01
SPB4P25808 FYV10YIL097W 1551 nt2.5□□□□□ -2.01
SPB4P25808 TFC3YAL001C 3483 nt2.5□□□□□ -2.01
SPB4P25808 UTP22YGR090W 3714 nt2.49□□□□□ -2.01
SPB4P25808 YGR146C-AYGR146C-A 162 nt2.49□□□□□ -2.01
SPB4P25808 UBP2YOR124C 3819 nt2.49□□□□□ -2.01
SPB4P25808 YOL098CYOL098C 3114 nt2.48□□□□□ -2.01
SPB4P25808 SEC21YNL287W 2808 nt2.48□□□□□ -2.01
SPB4P25808 snR190snR190 190 nt2.48□□□□□ -2.01
SPB4P25808 BIR1YJR089W 2865 nt2.48□□□□□ -2.01
SPB4P25808 snR81snR81 201 nt2.47□□□□□ -2.01
SPB4P25808 SWI4YER111C 3282 nt2.47□□□□□ -2.01
SPB4P25808 YAL037C-AYAL037C-A 93 nt2.46□□□□□ -2.02
SPB4P25808 STO1YMR125W 2586 nt2.46□□□□□ -2.02
SPB4P25808 SEC1YDR164C 2175 nt2.45□□□□□ -2.02
SPB4P25808 UFD4YKL010C 4452 nt2.45□□□□□ -2.02
SPB4P25808 SMC4YLR086W 4257 nt2.45□□□□□ -2.02
SPB4P25808 YJL127W-AYJL127W-A 117 nt2.44□□□□□ -2.02
SPB4P25808 WAR1YML076C 2835 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms