Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CCL2P13500 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCL2P13500 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCL2P13500 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CCL2P13500 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.45■□□□□ 0.38
CCL2P13500 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.45■□□□□ 0.38
CCL2P13500 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.45■□□□□ 0.38
CCL2P13500 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.45■□□□□ 0.38
CCL2P13500 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.45■□□□□ 0.38
CCL2P13500 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCL2P13500 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.45■□□□□ 0.38
CCL2P13500 PTBP1P-201ENST00000554374 1601 ntBASIC17.45■□□□□ 0.38
CCL2P13500 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL2P13500 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCL2P13500 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL2P13500 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CCL2P13500 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL2P13500 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL2P13500 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL2P13500 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL2P13500 AL162377.1-201ENST00000618844 1793 ntBASIC17.44■□□□□ 0.38
CCL2P13500 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL2P13500 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.44■□□□□ 0.38
CCL2P13500 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL2P13500 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.44■□□□□ 0.38
CCL2P13500 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL2P13500 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.44■□□□□ 0.38
CCL2P13500 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL2P13500 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL2P13500 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL2P13500 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCL2P13500 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL2P13500 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL2P13500 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL2P13500 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL2P13500 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCL2P13500 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL2P13500 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 RNA5SP413-201ENST00000516373 109 ntBASIC17.43■□□□□ 0.38
CCL2P13500 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.43■□□□□ 0.38
CCL2P13500 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.43■□□□□ 0.38
CCL2P13500 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCL2P13500 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.43■□□□□ 0.38
CCL2P13500 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCL2P13500 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL2P13500 AC099778.1-201ENST00000568593 1911 ntBASIC17.43■□□□□ 0.38
CCL2P13500 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL2P13500 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL2P13500 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.42■□□□□ 0.38
CCL2P13500 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL2P13500 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL2P13500 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL2P13500 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL2P13500 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.42■□□□□ 0.38
CCL2P13500 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL2P13500 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL2P13500 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCL2P13500 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL2P13500 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL2P13500 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CCL2P13500 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms