Protein–RNA interactions for Protein: Q12200

NCR1, NPC intracellular cholesterol transporter 1-related protein 1, yeastyeast

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCR1Q12200 MDS3YGL197W 4464 nt3.22□□□□□ -1.89
NCR1Q12200 PSY2YNL201C 2577 nt3.22□□□□□ -1.89
NCR1Q12200 SPO71YDR104C 3738 nt3.22□□□□□ -1.89
NCR1Q12200 PSK1YAL017W 4071 nt3.21□□□□□ -1.9
NCR1Q12200 FLO5YHR211W 3228 nt3.21□□□□□ -1.9
NCR1Q12200 NUP157YER105C 4176 nt3.21□□□□□ -1.9
NCR1Q12200 RIF1YBR275C 5751 nt3.21□□□□□ -1.9
NCR1Q12200 AI1Q0050 2505 nt3.2□□□□□ -1.9
NCR1Q12200 MGM1YOR211C 2646 nt3.2□□□□□ -1.9
NCR1Q12200 RPS28BYLR264W 204 nt3.2□□□□□ -1.9
NCR1Q12200 SET1YHR119W 3243 nt3.2□□□□□ -1.9
NCR1Q12200 TAO3YIL129C 7131 nt3.2□□□□□ -1.9
NCR1Q12200 POL2YNL262W 6669 nt3.2□□□□□ -1.9
NCR1Q12200 WAR1YML076C 2835 nt3.2□□□□□ -1.9
NCR1Q12200 RPO41YFL036W 4056 nt3.19□□□□□ -1.9
NCR1Q12200 SIN3YOL004W 4611 nt3.18□□□□□ -1.9
NCR1Q12200 SFB2YNL049C 2631 nt3.18□□□□□ -1.9
NCR1Q12200 VTC3YPL019C 2508 nt3.18□□□□□ -1.9
NCR1Q12200 CSR2YPR030W 3366 nt3.17□□□□□ -1.9
NCR1Q12200 ENA2YDR039C 3276 nt3.17□□□□□ -1.9
NCR1Q12200 ENA1YDR040C 3276 nt3.17□□□□□ -1.9
NCR1Q12200 DCP2YNL118C 2913 nt3.17□□□□□ -1.9
NCR1Q12200 MMS22YLR320W 4365 nt3.16□□□□□ -1.9
NCR1Q12200 POL5YEL055C 3069 nt3.16□□□□□ -1.9
NCR1Q12200 ROM1YGR070W 3468 nt3.16□□□□□ -1.9
NCR1Q12200 snR38snR38 95 nt3.16□□□□□ -1.9
NCR1Q12200 IKI3YLR384C 4050 nt3.16□□□□□ -1.9
NCR1Q12200 RAD9YDR217C 3930 nt3.15□□□□□ -1.9
NCR1Q12200 SWR1YDR334W 4545 nt3.15□□□□□ -1.9
NCR1Q12200 ILS1YBL076C 3219 nt3.15□□□□□ -1.91
NCR1Q12200 SMC1YFL008W 3678 nt3.15□□□□□ -1.91
NCR1Q12200 AZF1YOR113W 2745 nt3.15□□□□□ -1.91
NCR1Q12200 PET111YMR257C 2403 nt3.14□□□□□ -1.91
NCR1Q12200 CDC60YPL160W 3273 nt3.14□□□□□ -1.91
NCR1Q12200 YDR186CYDR186C 2634 nt3.14□□□□□ -1.91
NCR1Q12200 TSC11YER093C 4293 nt3.14□□□□□ -1.91
NCR1Q12200 GCV2YMR189W 3105 nt3.14□□□□□ -1.91
NCR1Q12200 BUD4YJR092W 4344 nt3.14□□□□□ -1.91
NCR1Q12200 PMR1YGL167C 2853 nt3.13□□□□□ -1.91
NCR1Q12200 SPO14YKR031C 5052 nt3.13□□□□□ -1.91
NCR1Q12200 YOR296WYOR296W 3870 nt3.13□□□□□ -1.91
NCR1Q12200 DYN1YKR054C 12279 nt3.12□□□□□ -1.91
NCR1Q12200 YSP2YDR326C 4317 nt3.11□□□□□ -1.91
NCR1Q12200 SLN1YIL147C 3663 nt3.11□□□□□ -1.91
NCR1Q12200 RPL41AYDL184C 78 nt3.11□□□□□ -1.91
NCR1Q12200 SPO24YPR036W-A 204 nt3.11□□□□□ -1.91
NCR1Q12200 YBR200W-AYBR200W-A 165 nt3.11□□□□□ -1.91
NCR1Q12200 RAX2YLR084C 3663 nt3.11□□□□□ -1.91
NCR1Q12200 ECM21YBL101C 3354 nt3.11□□□□□ -1.91
NCR1Q12200 SEC21YNL287W 2808 nt3.11□□□□□ -1.91
NCR1Q12200 FLO1YAR050W 4614 nt3.1□□□□□ -1.91
NCR1Q12200 POL3YDL102W 3294 nt3.1□□□□□ -1.91
NCR1Q12200 PIK1YNL267W 3201 nt3.1□□□□□ -1.91
NCR1Q12200 VPS16YPL045W 2397 nt3.1□□□□□ -1.91
NCR1Q12200 SCP160YJL080C 3669 nt3.09□□□□□ -1.91
NCR1Q12200 FRK1YPL141C 2598 nt3.09□□□□□ -1.91
NCR1Q12200 RSM22YKL155C 1887 nt3.09□□□□□ -1.91
NCR1Q12200 MDM1YML104C 3384 nt3.09□□□□□ -1.91
NCR1Q12200 MET5YJR137C 4329 nt3.09□□□□□ -1.91
NCR1Q12200 YDL073WYDL073W 2955 nt3.09□□□□□ -1.92
NCR1Q12200 YBT1YLL048C 4986 nt3.08□□□□□ -1.92
NCR1Q12200 SNQ2YDR011W 4506 nt3.08□□□□□ -1.92
NCR1Q12200 YLR299C-AYLR299C-A 93 nt3.08□□□□□ -1.92
NCR1Q12200 SDC25YLL016W 3147 nt3.07□□□□□ -1.92
NCR1Q12200 YBR296C-AYBR296C-A 120 nt3.07□□□□□ -1.92
NCR1Q12200 NIP1YMR309C 2439 nt3.07□□□□□ -1.92
NCR1Q12200 MSB2YGR014W 3921 nt3.06□□□□□ -1.92
NCR1Q12200 ARP8YOR141C 2646 nt3.06□□□□□ -1.92
NCR1Q12200 ENA5YDR038C 3276 nt3.06□□□□□ -1.92
NCR1Q12200 YIL169CYIL169C 2988 nt3.06□□□□□ -1.92
NCR1Q12200 CDC53YDL132W 2448 nt3.05□□□□□ -1.92
NCR1Q12200 KCS1YDR017C 3153 nt3.05□□□□□ -1.92
NCR1Q12200 SLI15YBR156C 2097 nt3.05□□□□□ -1.92
NCR1Q12200 FLO11YIR019C 4104 nt3.04□□□□□ -1.92
NCR1Q12200 PDR3YBL005W 2931 nt3.04□□□□□ -1.92
NCR1Q12200 FIR1YER032W 2631 nt3.04□□□□□ -1.92
NCR1Q12200 ISW1YBR245C 3390 nt3.04□□□□□ -1.92
NCR1Q12200 TFC4YGR047C 3078 nt3.04□□□□□ -1.92
NCR1Q12200 PET127YOR017W 2403 nt3.03□□□□□ -1.92
NCR1Q12200 ADR1YDR216W 3972 nt3.03□□□□□ -1.92
NCR1Q12200 MSH5YDL154W 2706 nt3.02□□□□□ -1.93
NCR1Q12200 tW(CCA)G1tW(CCA)G1 72 nt3.02□□□□□ -1.93
NCR1Q12200 tW(CCA)G2tW(CCA)G2 72 nt3.02□□□□□ -1.93
NCR1Q12200 tW(CCA)JtW(CCA)J 72 nt3.02□□□□□ -1.93
NCR1Q12200 tW(CCA)KtW(CCA)K 72 nt3.02□□□□□ -1.93
NCR1Q12200 tW(CCA)MtW(CCA)M 72 nt3.02□□□□□ -1.93
NCR1Q12200 tW(CCA)PtW(CCA)P 72 nt3.02□□□□□ -1.93
NCR1Q12200 SEC26YDR238C 2922 nt3.02□□□□□ -1.93
NCR1Q12200 RGA1YOR127W 3024 nt3.01□□□□□ -1.93
NCR1Q12200 YPR097WYPR097W 3222 nt3.01□□□□□ -1.93
NCR1Q12200 NNF2YGR089W 2811 nt3.01□□□□□ -1.93
NCR1Q12200 SCD5YOR329C 2619 nt3□□□□□ -1.93
NCR1Q12200 tD(GUC)QtD(GUC)Q 75 nt3□□□□□ -1.93
NCR1Q12200 RPL26BYGR034W 384 nt3□□□□□ -1.93
NCR1Q12200 UFD4YKL010C 4452 nt2.99□□□□□ -1.93
NCR1Q12200 DRS2YAL026C 4068 nt2.99□□□□□ -1.93
NCR1Q12200 YML054C-AYML054C-A 159 nt2.99□□□□□ -1.93
NCR1Q12200 TRS130YMR218C 3309 nt2.99□□□□□ -1.93
NCR1Q12200 ESL1YIL151C 3357 nt2.98□□□□□ -1.93
NCR1Q12200 YHR180C-BYHR180C-B 105 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 67.8 ms