Protein–RNA interactions for Protein: Q04712

RRN11, RNA polymerase I-specific transcription initiation factor RRN11, yeastyeast

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRN11Q04712 CTR9YOL145C 3234 nt1.44□□□□□ -2.18
RRN11Q04712 MAK10YEL053C 2202 nt1.44□□□□□ -2.18
RRN11Q04712 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
RRN11Q04712 MLH3YPL164C 2148 nt1.43□□□□□ -2.18
RRN11Q04712 TRM732YMR259C 4263 nt1.43□□□□□ -2.18
RRN11Q04712 YLR120W-AYLR120W-A 102 nt1.43□□□□□ -2.18
RRN11Q04712 CSE2YNR010W 450 nt1.43□□□□□ -2.18
RRN11Q04712 snR49snR49 165 nt1.43□□□□□ -2.18
RRN11Q04712 ZIP2YGL249W 2115 nt1.43□□□□□ -2.18
RRN11Q04712 IML1YJR138W 4755 nt1.43□□□□□ -2.18
RRN11Q04712 RAD34YDR314C 2079 nt1.43□□□□□ -2.18
RRN11Q04712 IRE1YHR079C 3348 nt1.42□□□□□ -2.18
RRN11Q04712 YMR172C-AYMR172C-A 384 nt1.42□□□□□ -2.18
RRN11Q04712 YMR321CYMR321C 318 nt1.42□□□□□ -2.18
RRN11Q04712 YGR130CYGR130C 2451 nt1.42□□□□□ -2.18
RRN11Q04712 PBY1YBR094W 2262 nt1.41□□□□□ -2.18
RRN11Q04712 SPO21YOL091W 1830 nt1.41□□□□□ -2.18
RRN11Q04712 YGL052WYGL052W 306 nt1.41□□□□□ -2.18
RRN11Q04712 YGL188C-AYGL188C-A 141 nt1.41□□□□□ -2.18
RRN11Q04712 YJL197C-AYJL197C-A 282 nt1.41□□□□□ -2.18
RRN11Q04712 ABF2YMR072W 552 nt1.41□□□□□ -2.18
RRN11Q04712 YMR175W-AYMR175W-A 195 nt1.41□□□□□ -2.18
RRN11Q04712 YOR008C-AYOR008C-A 225 nt1.41□□□□□ -2.18
RRN11Q04712 NOC3YLR002C 1992 nt1.41□□□□□ -2.18
RRN11Q04712 MAD1YGL086W 2250 nt1.41□□□□□ -2.18
RRN11Q04712 VPS54YDR027C 2670 nt1.41□□□□□ -2.18
RRN11Q04712 CCH1YGR217W 6120 nt1.41□□□□□ -2.18
RRN11Q04712 SAS3YBL052C 2496 nt1.4□□□□□ -2.19
RRN11Q04712 RPL34BYIL052C 366 nt1.4□□□□□ -2.19
RRN11Q04712 PFD1YJL179W 330 nt1.4□□□□□ -2.19
RRN11Q04712 DGR2YKL121W 2559 nt1.4□□□□□ -2.19
RRN11Q04712 ALK1YGL021W 2283 nt1.4□□□□□ -2.19
RRN11Q04712 snR74snR74 88 nt1.39□□□□□ -2.19
RRN11Q04712 YNL028WYNL028W 318 nt1.39□□□□□ -2.19
RRN11Q04712 PDE2YOR360C 1581 nt1.38□□□□□ -2.19
RRN11Q04712 RSM22YKL155C 1887 nt1.38□□□□□ -2.19
RRN11Q04712 CDC36YDL165W 576 nt1.38□□□□□ -2.19
RRN11Q04712 YJL022WYJL022W 309 nt1.38□□□□□ -2.19
RRN11Q04712 YJL120WYJL120W 324 nt1.38□□□□□ -2.19
RRN11Q04712 SMC4YLR086W 4257 nt1.38□□□□□ -2.19
RRN11Q04712 NCA2YPR155C 1851 nt1.37□□□□□ -2.19
RRN11Q04712 tQ(UUG)E2tQ(UUG)E2 72 nt1.37□□□□□ -2.19
RRN11Q04712 VPS55YJR044C 423 nt1.37□□□□□ -2.19
RRN11Q04712 snR14snR14 160 nt1.37□□□□□ -2.19
RRN11Q04712 UBP3YER151C 2739 nt1.37□□□□□ -2.19
RRN11Q04712 MSN5YDR335W 3675 nt1.36□□□□□ -2.19
RRN11Q04712 FRK1YPL141C 2598 nt1.36□□□□□ -2.19
RRN11Q04712 YOR011W-AYOR011W-A 207 nt1.36□□□□□ -2.19
RRN11Q04712 YOR302WYOR302W 78 nt1.36□□□□□ -2.19
RRN11Q04712 EST2YLR318W 2655 nt1.36□□□□□ -2.19
RRN11Q04712 tF(GAA)QtF(GAA)Q 75 nt1.35□□□□□ -2.19
RRN11Q04712 RPS25BYLR333C 327 nt1.35□□□□□ -2.19
RRN11Q04712 YOL155W-AYOL155W-A 135 nt1.35□□□□□ -2.19
RRN11Q04712 IES4YOR189W 351 nt1.35□□□□□ -2.19
RRN11Q04712 RAD50YNL250W 3939 nt1.34□□□□□ -2.19
RRN11Q04712 YGL217CYGL217C 342 nt1.34□□□□□ -2.19
RRN11Q04712 JLP2YMR132C 627 nt1.34□□□□□ -2.19
RRN11Q04712 YPR092WYPR092W 306 nt1.34□□□□□ -2.19
RRN11Q04712 YBR206WYBR206W 324 nt1.34□□□□□ -2.19
RRN11Q04712 YCS4YLR272C 3531 nt1.34□□□□□ -2.2
RRN11Q04712 COG4YPR105C 2586 nt1.33□□□□□ -2.2
RRN11Q04712 RPS27BYHR021C 249 nt1.33□□□□□ -2.2
RRN11Q04712 COF1YLL050C 432 nt1.33□□□□□ -2.2
RRN11Q04712 YOR108C-AYOR108C-A 210 nt1.33□□□□□ -2.2
RRN11Q04712 snR55snR55 98 nt1.32□□□□□ -2.2
RRN11Q04712 YDR521WYDR521W 336 nt1.32□□□□□ -2.2
RRN11Q04712 NST1YNL091W 3723 nt1.31□□□□□ -2.2
RRN11Q04712 RAD9YDR217C 3930 nt1.31□□□□□ -2.2
RRN11Q04712 SPG3YDR504C 384 nt1.31□□□□□ -2.2
RRN11Q04712 tH(GUG)E1tH(GUG)E1 72 nt1.31□□□□□ -2.2
RRN11Q04712 tH(GUG)E2tH(GUG)E2 72 nt1.31□□□□□ -2.2
RRN11Q04712 tH(GUG)G1tH(GUG)G1 72 nt1.31□□□□□ -2.2
RRN11Q04712 tH(GUG)G2tH(GUG)G2 72 nt1.31□□□□□ -2.2
RRN11Q04712 tH(GUG)HtH(GUG)H 72 nt1.31□□□□□ -2.2
RRN11Q04712 tH(GUG)KtH(GUG)K 72 nt1.31□□□□□ -2.2
RRN11Q04712 tH(GUG)MtH(GUG)M 72 nt1.31□□□□□ -2.2
RRN11Q04712 YMR307C-AYMR307C-A 195 nt1.31□□□□□ -2.2
RRN11Q04712 SLD3YGL113W 2007 nt1.31□□□□□ -2.2
RRN11Q04712 AHC1YOR023C 1701 nt1.31□□□□□ -2.2
RRN11Q04712 GPG1YGL121C 381 nt1.3□□□□□ -2.2
RRN11Q04712 EMC5YIL027C 426 nt1.3□□□□□ -2.2
RRN11Q04712 CLU1YMR012W 3834 nt1.3□□□□□ -2.2
RRN11Q04712 NUT1YGL151W 3399 nt1.3□□□□□ -2.2
RRN11Q04712 SLX4YLR135W 2247 nt1.3□□□□□ -2.2
RRN11Q04712 NUP157YER105C 4176 nt1.29□□□□□ -2.2
RRN11Q04712 SLI15YBR156C 2097 nt1.29□□□□□ -2.2
RRN11Q04712 STF2YGR008C 255 nt1.29□□□□□ -2.2
RRN11Q04712 YIL020C-AYIL020C-A 339 nt1.29□□□□□ -2.2
RRN11Q04712 YOR218CYOR218C 420 nt1.29□□□□□ -2.2
RRN11Q04712 SGF11YPL047W 300 nt1.29□□□□□ -2.2
RRN11Q04712 UFD2YDL190C 2886 nt1.29□□□□□ -2.2
RRN11Q04712 YNL284C-BYNL284C-B 5268 nt1.29□□□□□ -2.2
RRN11Q04712 YLL007CYLL007C 1998 nt1.28□□□□□ -2.2
RRN11Q04712 TTI1YKL033W 3117 nt1.28□□□□□ -2.2
RRN11Q04712 PKH2YOL100W 3246 nt1.27□□□□□ -2.21
RRN11Q04712 tV(UAC)BtV(UAC)B 74 nt1.27□□□□□ -2.21
RRN11Q04712 tV(UAC)DtV(UAC)D 74 nt1.27□□□□□ -2.21
RRN11Q04712 RRT15YLR162W-A 189 nt1.27□□□□□ -2.21
RRN11Q04712 ECM12YHR021W-A 456 nt1.26□□□□□ -2.21
RRN11Q04712 PAM16YJL104W 450 nt1.26□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 208.8 ms