Protein–RNA interactions for Protein: Q03308

VPS16, Vacuolar protein sorting-associated protein 16, yeastyeast

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS16Q03308 PDR8YLR266C 2106 nt2.3□□□□□ -2.04
VPS16Q03308 UTP21YLR409C 2820 nt2.29□□□□□ -2.04
VPS16Q03308 DGR1YNL130C-A 147 nt2.29□□□□□ -2.04
VPS16Q03308 YBR174CYBR174C 315 nt2.29□□□□□ -2.04
VPS16Q03308 MGA2YIR033W 3342 nt2.28□□□□□ -2.04
VPS16Q03308 RGA1YOR127W 3024 nt2.28□□□□□ -2.04
VPS16Q03308 RPL31AYDL075W 342 nt2.28□□□□□ -2.04
VPS16Q03308 YMR175W-AYMR175W-A 195 nt2.28□□□□□ -2.04
VPS16Q03308 ECM12YHR021W-A 456 nt2.27□□□□□ -2.05
VPS16Q03308 YOR072W-BYOR072W-B 162 nt2.27□□□□□ -2.05
VPS16Q03308 HSL1YKL101W 4557 nt2.27□□□□□ -2.05
VPS16Q03308 YDL007C-AYDL007C-A 258 nt2.26□□□□□ -2.05
VPS16Q03308 YJL052C-AYJL052C-A 120 nt2.26□□□□□ -2.05
VPS16Q03308 SLI15YBR156C 2097 nt2.26□□□□□ -2.05
VPS16Q03308 ATP8Q0080 147 nt2.25□□□□□ -2.05
VPS16Q03308 ULI1YFR026C 510 nt2.25□□□□□ -2.05
VPS16Q03308 PAU3YCR104W 375 nt2.24□□□□□ -2.05
VPS16Q03308 PBY1YBR094W 2262 nt2.24□□□□□ -2.05
VPS16Q03308 SEC31YDL195W 3822 nt2.23□□□□□ -2.05
VPS16Q03308 COF1YLL050C 432 nt2.23□□□□□ -2.05
VPS16Q03308 snR46snR46 197 nt2.23□□□□□ -2.05
VPS16Q03308 snR52snR52 92 nt2.23□□□□□ -2.05
VPS16Q03308 PKH2YOL100W 3246 nt2.23□□□□□ -2.05
VPS16Q03308 SPP41YDR464W 4308 nt2.22□□□□□ -2.05
VPS16Q03308 YJR039WYJR039W 3366 nt2.22□□□□□ -2.05
VPS16Q03308 SAP190YKR028W 3102 nt2.22□□□□□ -2.05
VPS16Q03308 ALK1YGL021W 2283 nt2.21□□□□□ -2.06
VPS16Q03308 COG4YPR105C 2586 nt2.21□□□□□ -2.06
VPS16Q03308 BNI1YNL271C 5862 nt2.21□□□□□ -2.06
VPS16Q03308 USO1YDL058W 5373 nt2.2□□□□□ -2.06
VPS16Q03308 LHS1YKL073W 2646 nt2.2□□□□□ -2.06
VPS16Q03308 PIP2YOR363C 2991 nt2.2□□□□□ -2.06
VPS16Q03308 BRE1YDL074C 2103 nt2.2□□□□□ -2.06
VPS16Q03308 EMC5YIL027C 426 nt2.19□□□□□ -2.06
VPS16Q03308 YOR345CYOR345C 351 nt2.19□□□□□ -2.06
VPS16Q03308 SPO24YPR036W-A 204 nt2.19□□□□□ -2.06
VPS16Q03308 STH1YIL126W 4080 nt2.19□□□□□ -2.06
VPS16Q03308 GCN2YDR283C 4980 nt2.18□□□□□ -2.06
VPS16Q03308 YDR521WYDR521W 336 nt2.18□□□□□ -2.06
VPS16Q03308 YOR170WYOR170W 306 nt2.18□□□□□ -2.06
VPS16Q03308 NEO1YIL048W 3456 nt2.17□□□□□ -2.06
VPS16Q03308 YLL019W-AYLL019W-A 93 nt2.17□□□□□ -2.06
VPS16Q03308 TMA7YLR262C-A 195 nt2.17□□□□□ -2.06
VPS16Q03308 APL5YPL195W 2799 nt2.17□□□□□ -2.06
VPS16Q03308 IFH1YLR223C 3258 nt2.16□□□□□ -2.06
VPS16Q03308 YMR045CYMR045C 5268 nt2.16□□□□□ -2.06
VPS16Q03308 AHC1YOR023C 1701 nt2.16□□□□□ -2.06
VPS16Q03308 LRE1YCL051W 1752 nt2.15□□□□□ -2.06
VPS16Q03308 NUT1YGL151W 3399 nt2.15□□□□□ -2.06
VPS16Q03308 ADR1YDR216W 3972 nt2.15□□□□□ -2.06
VPS16Q03308 AIM44YPL158C 2277 nt2.15□□□□□ -2.06
VPS16Q03308 TRM3YDL112W 4311 nt2.15□□□□□ -2.07
VPS16Q03308 SLD3YGL113W 2007 nt2.15□□□□□ -2.07
VPS16Q03308 UTP22YGR090W 3714 nt2.14□□□□□ -2.07
VPS16Q03308 NCA2YPR155C 1851 nt2.14□□□□□ -2.07
VPS16Q03308 YDL196WYDL196W 330 nt2.14□□□□□ -2.07
VPS16Q03308 RAD50YNL250W 3939 nt2.13□□□□□ -2.07
VPS16Q03308 UBR2YLR024C 5619 nt2.13□□□□□ -2.07
VPS16Q03308 RPL33BYOR234C 324 nt2.13□□□□□ -2.07
VPS16Q03308 SKI3YPR189W 4299 nt2.13□□□□□ -2.07
VPS16Q03308 SBE22YHR103W 2559 nt2.13□□□□□ -2.07
VPS16Q03308 TOR2YKL203C 7425 nt2.12□□□□□ -2.07
VPS16Q03308 YHR210CYHR210C 1026 nt2.12□□□□□ -2.07
VPS16Q03308 YNL170WYNL170W 396 nt2.12□□□□□ -2.07
VPS16Q03308 KIP1YBL063W 3336 nt2.11□□□□□ -2.07
VPS16Q03308 FIG4YNL325C 2640 nt2.11□□□□□ -2.07
VPS16Q03308 YOR381W-AYOR381W-A 168 nt2.11□□□□□ -2.07
VPS16Q03308 UFD2YDL190C 2886 nt2.1□□□□□ -2.07
VPS16Q03308 YBR206WYBR206W 324 nt2.1□□□□□ -2.07
VPS16Q03308 BPH1YCR032W 6504 nt2.09□□□□□ -2.07
VPS16Q03308 FKS1YLR342W 5631 nt2.09□□□□□ -2.08
VPS16Q03308 PMP1YCR024C-A 123 nt2.08□□□□□ -2.08
VPS16Q03308 TBS1YBR150C 3285 nt2.08□□□□□ -2.08
VPS16Q03308 ALY2YJL084C 3141 nt2.08□□□□□ -2.08
VPS16Q03308 YLL054CYLL054C 2532 nt2.08□□□□□ -2.08
VPS16Q03308 CTF4YPR135W 2784 nt2.07□□□□□ -2.08
VPS16Q03308 YEL073CYEL073C 324 nt2.07□□□□□ -2.08
VPS16Q03308 MMS4YBR098W 2076 nt2.06□□□□□ -2.08
VPS16Q03308 COY1YKL179C 2040 nt2.06□□□□□ -2.08
VPS16Q03308 SLX4YLR135W 2247 nt2.05□□□□□ -2.08
VPS16Q03308 YDL206WYDL206W 2289 nt2.05□□□□□ -2.08
VPS16Q03308 KCS1YDR017C 3153 nt2.05□□□□□ -2.08
VPS16Q03308 YGR109W-BYGR109W-B 4644 nt2.05□□□□□ -2.08
VPS16Q03308 YCS4YLR272C 3531 nt2.04□□□□□ -2.08
VPS16Q03308 YOR161W-BYOR161W-B 261 nt2.04□□□□□ -2.08
VPS16Q03308 PAN2YGL094C 3348 nt2.04□□□□□ -2.08
VPS16Q03308 YDR354C-AYDR354C-A 144 nt2.03□□□□□ -2.08
VPS16Q03308 SDH6YDR379C-A 240 nt2.03□□□□□ -2.08
VPS16Q03308 SAC3YDR159W 3906 nt2.02□□□□□ -2.09
VPS16Q03308 SMC4YLR086W 4257 nt2.02□□□□□ -2.09
VPS16Q03308 HAL9YOL089C 3093 nt2.01□□□□□ -2.09
VPS16Q03308 YJL022WYJL022W 309 nt2.01□□□□□ -2.09
VPS16Q03308 YGR164WYGR164W 336 nt2□□□□□ -2.09
VPS16Q03308 PKH3YDR466W 2697 nt1.99□□□□□ -2.09
VPS16Q03308 YER172C-AYER172C-A 381 nt1.99□□□□□ -2.09
VPS16Q03308 APL1YJR005W 2103 nt1.99□□□□□ -2.09
VPS16Q03308 YLR419WYLR419W 4308 nt1.98□□□□□ -2.09
VPS16Q03308 MDS3YGL197W 4464 nt1.97□□□□□ -2.09
VPS16Q03308 GYP5YPL249C 2685 nt1.96□□□□□ -2.1
VPS16Q03308 YIL134C-AYIL134C-A 204 nt1.96□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms