Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 YGL217CYGL217C 342 nt1.36□□□□□ -2.19
CAF40P53829 YNL028WYNL028W 318 nt1.36□□□□□ -2.19
CAF40P53829 snR14snR14 160 nt1.36□□□□□ -2.19
CAF40P53829 SPC110YDR356W 2835 nt1.36□□□□□ -2.19
CAF40P53829 NUT1YGL151W 3399 nt1.36□□□□□ -2.19
CAF40P53829 SPO21YOL091W 1830 nt1.36□□□□□ -2.19
CAF40P53829 YGL041CYGL041C 204 nt1.35□□□□□ -2.19
CAF40P53829 YJL120WYJL120W 324 nt1.35□□□□□ -2.19
CAF40P53829 YLR120W-AYLR120W-A 102 nt1.35□□□□□ -2.19
CAF40P53829 YMR172C-AYMR172C-A 384 nt1.35□□□□□ -2.19
CAF40P53829 VPS54YDR027C 2670 nt1.35□□□□□ -2.19
CAF40P53829 UFD2YDL190C 2886 nt1.35□□□□□ -2.19
CAF40P53829 KAP122YGL016W 3246 nt1.34□□□□□ -2.19
CAF40P53829 BST1YFL025C 3090 nt1.34□□□□□ -2.19
CAF40P53829 COG4YPR105C 2586 nt1.34□□□□□ -2.19
CAF40P53829 SLX4YLR135W 2247 nt1.34□□□□□ -2.19
CAF40P53829 snR80snR80 171 nt1.34□□□□□ -2.19
CAF40P53829 SXM1YDR395W 2835 nt1.34□□□□□ -2.2
CAF40P53829 YGL052WYGL052W 306 nt1.33□□□□□ -2.2
CAF40P53829 YJL197C-AYJL197C-A 282 nt1.33□□□□□ -2.2
CAF40P53829 RPS25BYLR333C 327 nt1.33□□□□□ -2.2
CAF40P53829 YMR158W-BYMR158W-B 321 nt1.33□□□□□ -2.2
CAF40P53829 PDE2YOR360C 1581 nt1.33□□□□□ -2.2
CAF40P53829 SLI15YBR156C 2097 nt1.33□□□□□ -2.2
CAF40P53829 FIG2YCR089W 4830 nt1.32□□□□□ -2.2
CAF40P53829 SEC5YDR166C 2916 nt1.32□□□□□ -2.2
CAF40P53829 YDR521WYDR521W 336 nt1.32□□□□□ -2.2
CAF40P53829 VPS55YJR044C 423 nt1.32□□□□□ -2.2
CAF40P53829 YMR321CYMR321C 318 nt1.32□□□□□ -2.2
CAF40P53829 YBR206WYBR206W 324 nt1.32□□□□□ -2.2
CAF40P53829 snR49snR49 165 nt1.32□□□□□ -2.2
CAF40P53829 AHC1YOR023C 1701 nt1.32□□□□□ -2.2
CAF40P53829 SAC3YDR159W 3906 nt1.31□□□□□ -2.2
CAF40P53829 YGL188C-AYGL188C-A 141 nt1.31□□□□□ -2.2
CAF40P53829 RPS27BYHR021C 249 nt1.31□□□□□ -2.2
CAF40P53829 YLR140WYLR140W 327 nt1.31□□□□□ -2.2
CAF40P53829 YOR011W-AYOR011W-A 207 nt1.31□□□□□ -2.2
CAF40P53829 YOR376WYOR376W 369 nt1.31□□□□□ -2.2
CAF40P53829 NCA2YPR155C 1851 nt1.31□□□□□ -2.2
CAF40P53829 PKH2YOL100W 3246 nt1.3□□□□□ -2.2
CAF40P53829 YLL007CYLL007C 1998 nt1.3□□□□□ -2.2
CAF40P53829 POL5YEL055C 3069 nt1.3□□□□□ -2.2
CAF40P53829 CUL3YGR003W 2235 nt1.3□□□□□ -2.2
CAF40P53829 PBY1YBR094W 2262 nt1.3□□□□□ -2.2
CAF40P53829 YIR044CYIR044C 186 nt1.3□□□□□ -2.2
CAF40P53829 IES4YOR189W 351 nt1.3□□□□□ -2.2
CAF40P53829 SLD3YGL113W 2007 nt1.3□□□□□ -2.2
CAF40P53829 snR74snR74 88 nt1.28□□□□□ -2.2
CAF40P53829 ABF2YMR072W 552 nt1.28□□□□□ -2.2
CAF40P53829 HKR1YDR420W 5409 nt1.28□□□□□ -2.2
CAF40P53829 IFH1YLR223C 3258 nt1.28□□□□□ -2.21
CAF40P53829 YOR218CYOR218C 420 nt1.27□□□□□ -2.21
CAF40P53829 KIP1YBL063W 3336 nt1.27□□□□□ -2.21
CAF40P53829 PTP2YOR208W 2253 nt1.27□□□□□ -2.21
CAF40P53829 NPR2YEL062W 1848 nt1.26□□□□□ -2.21
CAF40P53829 tF(GAA)QtF(GAA)Q 75 nt1.26□□□□□ -2.21
CAF40P53829 YOL155W-AYOL155W-A 135 nt1.26□□□□□ -2.21
CAF40P53829 YPR092WYPR092W 306 nt1.26□□□□□ -2.21
CAF40P53829 EST2YLR318W 2655 nt1.26□□□□□ -2.21
CAF40P53829 YDL206WYDL206W 2289 nt1.26□□□□□ -2.21
CAF40P53829 SEC21YNL287W 2808 nt1.25□□□□□ -2.21
CAF40P53829 ALY2YJL084C 3141 nt1.25□□□□□ -2.21
CAF40P53829 CDC36YDL165W 576 nt1.25□□□□□ -2.21
CAF40P53829 YIL020C-AYIL020C-A 339 nt1.25□□□□□ -2.21
CAF40P53829 NUP188YML103C 4968 nt1.25□□□□□ -2.21
CAF40P53829 LAA1YJL207C 6045 nt1.24□□□□□ -2.21
CAF40P53829 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
CAF40P53829 snR55snR55 98 nt1.24□□□□□ -2.21
CAF40P53829 YMR307C-AYMR307C-A 195 nt1.24□□□□□ -2.21
CAF40P53829 YCL023CYCL023C 348 nt1.24□□□□□ -2.21
CAF40P53829 GPG1YGL121C 381 nt1.23□□□□□ -2.21
CAF40P53829 PFD1YJL179W 330 nt1.23□□□□□ -2.21
CAF40P53829 CAT8YMR280C 4302 nt1.23□□□□□ -2.21
CAF40P53829 YLL054CYLL054C 2532 nt1.22□□□□□ -2.21
CAF40P53829 SGF11YPL047W 300 nt1.22□□□□□ -2.21
CAF40P53829 FIG4YNL325C 2640 nt1.22□□□□□ -2.21
CAF40P53829 SET3YKR029C 2256 nt1.21□□□□□ -2.22
CAF40P53829 ECM12YHR021W-A 456 nt1.21□□□□□ -2.22
CAF40P53829 COA6YMR244C-A 315 nt1.21□□□□□ -2.22
CAF40P53829 YOR302WYOR302W 78 nt1.21□□□□□ -2.22
CAF40P53829 PIP2YOR363C 2991 nt1.21□□□□□ -2.22
CAF40P53829 YLR422WYLR422W 5799 nt1.21□□□□□ -2.22
CAF40P53829 YCS4YLR272C 3531 nt1.2□□□□□ -2.22
CAF40P53829 MSN5YDR335W 3675 nt1.2□□□□□ -2.22
CAF40P53829 APL3YBL037W 3078 nt1.2□□□□□ -2.22
CAF40P53829 STO1YMR125W 2586 nt1.2□□□□□ -2.22
CAF40P53829 MMS4YBR098W 2076 nt1.2□□□□□ -2.22
CAF40P53829 MCM10YIL150C 1716 nt1.2□□□□□ -2.22
CAF40P53829 YAR009CYAR009C 3591 nt1.19□□□□□ -2.22
CAF40P53829 CDC39YCR093W 6327 nt1.19□□□□□ -2.22
CAF40P53829 YBR221W-AYBR221W-A 105 nt1.19□□□□□ -2.22
CAF40P53829 AZF1YOR113W 2745 nt1.19□□□□□ -2.22
CAF40P53829 SWI4YER111C 3282 nt1.18□□□□□ -2.22
CAF40P53829 TRM3YDL112W 4311 nt1.18□□□□□ -2.22
CAF40P53829 PAN2YGL094C 3348 nt1.17□□□□□ -2.22
CAF40P53829 YDR354C-AYDR354C-A 144 nt1.17□□□□□ -2.22
CAF40P53829 YIR030W-AYIR030W-A 384 nt1.17□□□□□ -2.22
CAF40P53829 YLL019W-AYLL019W-A 93 nt1.17□□□□□ -2.22
CAF40P53829 RRT15YLR162W-A 189 nt1.17□□□□□ -2.22
CAF40P53829 YOR161W-BYOR161W-B 261 nt1.17□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms