Protein–RNA interactions for Protein: P40479

SDP1, Dual-specificity protein phosphatase SDP1, yeastyeast

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDP1P40479 IRE1YHR079C 3348 nt2.08□□□□□ -2.08
SDP1P40479 BUD2YKL092C 3315 nt2.07□□□□□ -2.08
SDP1P40479 APL5YPL195W 2799 nt2.07□□□□□ -2.08
SDP1P40479 RTT101YJL047C 2529 nt2.07□□□□□ -2.08
SDP1P40479 YCR087C-AYCR087C-A 462 nt2.07□□□□□ -2.08
SDP1P40479 SLD3YGL113W 2007 nt2.07□□□□□ -2.08
SDP1P40479 YOL098CYOL098C 3114 nt2.06□□□□□ -2.08
SDP1P40479 SNU13YEL026W 381 nt2.06□□□□□ -2.08
SDP1P40479 BNI1YNL271C 5862 nt2.06□□□□□ -2.08
SDP1P40479 ALK1YGL021W 2283 nt2.06□□□□□ -2.08
SDP1P40479 HSL1YKL101W 4557 nt2.06□□□□□ -2.08
SDP1P40479 HAL9YOL089C 3093 nt2.05□□□□□ -2.08
SDP1P40479 SKP2YNL311C 2292 nt2.05□□□□□ -2.08
SDP1P40479 TOR2YKL203C 7425 nt2.05□□□□□ -2.08
SDP1P40479 PDR3YBL005W 2931 nt2.05□□□□□ -2.08
SDP1P40479 DNA2YHR164C 4569 nt2.05□□□□□ -2.08
SDP1P40479 UBP15YMR304W 3693 nt2.05□□□□□ -2.08
SDP1P40479 SSD1YDR293C 3753 nt2.05□□□□□ -2.08
SDP1P40479 SBE22YHR103W 2559 nt2.04□□□□□ -2.08
SDP1P40479 SAP190YKR028W 3102 nt2.04□□□□□ -2.08
SDP1P40479 YDR521WYDR521W 336 nt2.04□□□□□ -2.08
SDP1P40479 YMR175W-AYMR175W-A 195 nt2.04□□□□□ -2.08
SDP1P40479 PBY1YBR094W 2262 nt2.03□□□□□ -2.08
SDP1P40479 HIR3YJR140C 4947 nt2.03□□□□□ -2.08
SDP1P40479 SAP185YJL098W 3177 nt2.03□□□□□ -2.08
SDP1P40479 FRK1YPL141C 2598 nt2.03□□□□□ -2.08
SDP1P40479 TFC3YAL001C 3483 nt2.03□□□□□ -2.08
SDP1P40479 RGA1YOR127W 3024 nt2.03□□□□□ -2.08
SDP1P40479 USO1YDL058W 5373 nt2.02□□□□□ -2.09
SDP1P40479 YNL144CYNL144C 2223 nt2.02□□□□□ -2.09
SDP1P40479 PKH2YOL100W 3246 nt2.02□□□□□ -2.09
SDP1P40479 IRC8YJL051W 2469 nt2.01□□□□□ -2.09
SDP1P40479 YDL118WYDL118W 381 nt2.01□□□□□ -2.09
SDP1P40479 YBR206WYBR206W 324 nt2.01□□□□□ -2.09
SDP1P40479 IFH1YLR223C 3258 nt2.01□□□□□ -2.09
SDP1P40479 COG4YPR105C 2586 nt2.01□□□□□ -2.09
SDP1P40479 YDR354C-AYDR354C-A 144 nt2□□□□□ -2.09
SDP1P40479 YGR109W-BYGR109W-B 4644 nt1.99□□□□□ -2.09
SDP1P40479 SLI15YBR156C 2097 nt1.99□□□□□ -2.09
SDP1P40479 IST2YBR086C 2841 nt1.99□□□□□ -2.09
SDP1P40479 YIL134C-AYIL134C-A 204 nt1.99□□□□□ -2.09
SDP1P40479 YJL052C-AYJL052C-A 120 nt1.99□□□□□ -2.09
SDP1P40479 YBR221W-AYBR221W-A 105 nt1.99□□□□□ -2.09
SDP1P40479 YLR035C-AYLR035C-A 3468 nt1.98□□□□□ -2.09
SDP1P40479 SPP41YDR464W 4308 nt1.98□□□□□ -2.09
SDP1P40479 RPS30BYOR182C 192 nt1.98□□□□□ -2.09
SDP1P40479 YPL044CYPL044C 549 nt1.98□□□□□ -2.09
SDP1P40479 SEC16YPL085W 6588 nt1.98□□□□□ -2.09
SDP1P40479 BPH1YCR032W 6504 nt1.97□□□□□ -2.09
SDP1P40479 YHL015W-AYHL015W-A 84 nt1.97□□□□□ -2.09
SDP1P40479 SIR4YDR227W 4077 nt1.97□□□□□ -2.09
SDP1P40479 SCP160YJL080C 3669 nt1.97□□□□□ -2.09
SDP1P40479 MSH6YDR097C 3729 nt1.96□□□□□ -2.1
SDP1P40479 HER1YOR227W 3741 nt1.96□□□□□ -2.1
SDP1P40479 SEY1YOR165W 2331 nt1.96□□□□□ -2.1
SDP1P40479 BRE1YDL074C 2103 nt1.95□□□□□ -2.1
SDP1P40479 YOR102WYOR102W 351 nt1.95□□□□□ -2.1
SDP1P40479 STH1YIL126W 4080 nt1.95□□□□□ -2.1
SDP1P40479 NUP170YBL079W 4509 nt1.95□□□□□ -2.1
SDP1P40479 SFB2YNL049C 2631 nt1.94□□□□□ -2.1
SDP1P40479 INO80YGL150C 4470 nt1.94□□□□□ -2.1
SDP1P40479 YCR038W-AYCR038W-A 126 nt1.94□□□□□ -2.1
SDP1P40479 YJL026C-AYJL026C-A 222 nt1.94□□□□□ -2.1
SDP1P40479 YMR045CYMR045C 5268 nt1.94□□□□□ -2.1
SDP1P40479 SEC63YOR254C 1992 nt1.93□□□□□ -2.1
SDP1P40479 PAA1YDR071C 576 nt1.93□□□□□ -2.1
SDP1P40479 COX12YLR038C 252 nt1.93□□□□□ -2.1
SDP1P40479 NAB6YML117W 3405 nt1.92□□□□□ -2.1
SDP1P40479 MDS3YGL197W 4464 nt1.92□□□□□ -2.1
SDP1P40479 UTP22YGR090W 3714 nt1.92□□□□□ -2.1
SDP1P40479 DGR1YNL130C-A 147 nt1.92□□□□□ -2.1
SDP1P40479 MYO4YAL029C 4416 nt1.92□□□□□ -2.1
SDP1P40479 SPO24YPR036W-A 204 nt1.91□□□□□ -2.1
SDP1P40479 ADR1YDR216W 3972 nt1.91□□□□□ -2.1
SDP1P40479 UTP21YLR409C 2820 nt1.9□□□□□ -2.1
SDP1P40479 YOR314W-AYOR314W-A 111 nt1.9□□□□□ -2.11
SDP1P40479 CTF4YPR135W 2784 nt1.9□□□□□ -2.11
SDP1P40479 UBR2YLR024C 5619 nt1.9□□□□□ -2.11
SDP1P40479 YJL022WYJL022W 309 nt1.89□□□□□ -2.11
SDP1P40479 TTI1YKL033W 3117 nt1.88□□□□□ -2.11
SDP1P40479 APL1YJR005W 2103 nt1.88□□□□□ -2.11
SDP1P40479 ATG9YDL149W 2994 nt1.88□□□□□ -2.11
SDP1P40479 YCL001W-BYCL001W-B 255 nt1.88□□□□□ -2.11
SDP1P40479 TDA9YML081W 3756 nt1.88□□□□□ -2.11
SDP1P40479 UFD4YKL010C 4452 nt1.87□□□□□ -2.11
SDP1P40479 FKS1YLR342W 5631 nt1.87□□□□□ -2.11
SDP1P40479 YOR329W-AYOR329W-A 210 nt1.86□□□□□ -2.11
SDP1P40479 YDL206WYDL206W 2289 nt1.86□□□□□ -2.11
SDP1P40479 YLR419WYLR419W 4308 nt1.85□□□□□ -2.11
SDP1P40479 PDR8YLR266C 2106 nt1.85□□□□□ -2.11
SDP1P40479 RAD50YNL250W 3939 nt1.85□□□□□ -2.11
SDP1P40479 YER053C-AYER053C-A 114 nt1.85□□□□□ -2.11
SDP1P40479 YIL002W-AYIL002W-A 210 nt1.85□□□□□ -2.11
SDP1P40479 YNL211CYNL211C 261 nt1.85□□□□□ -2.11
SDP1P40479 GCN2YDR283C 4980 nt1.85□□□□□ -2.11
SDP1P40479 SLN1YIL147C 3663 nt1.84□□□□□ -2.11
SDP1P40479 YER172C-AYER172C-A 381 nt1.84□□□□□ -2.11
SDP1P40479 PRP5YBR237W 2550 nt1.84□□□□□ -2.12
SDP1P40479 NUT1YGL151W 3399 nt1.84□□□□□ -2.12
SDP1P40479 YHR214C-BYHR214C-B 5382 nt1.81□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms