Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 YDR341CYDR341C 1824 nt2.33□□□□□ -2.04
RPN3P40016 YKL165C-AYKL165C-A 234 nt2.32□□□□□ -2.04
RPN3P40016 TRS130YMR218C 3309 nt2.32□□□□□ -2.04
RPN3P40016 TOR2YKL203C 7425 nt2.32□□□□□ -2.04
RPN3P40016 MLH3YPL164C 2148 nt2.32□□□□□ -2.04
RPN3P40016 CSF1YLR087C 8877 nt2.31□□□□□ -2.04
RPN3P40016 SAP185YJL098W 3177 nt2.31□□□□□ -2.04
RPN3P40016 SLD3YGL113W 2007 nt2.31□□□□□ -2.04
RPN3P40016 VPS8YAL002W 3825 nt2.31□□□□□ -2.04
RPN3P40016 YOR102WYOR102W 351 nt2.31□□□□□ -2.04
RPN3P40016 TRL1YJL087C 2484 nt2.31□□□□□ -2.04
RPN3P40016 MSH5YDL154W 2706 nt2.31□□□□□ -2.04
RPN3P40016 YIL134C-AYIL134C-A 204 nt2.3□□□□□ -2.04
RPN3P40016 YPL044CYPL044C 549 nt2.3□□□□□ -2.04
RPN3P40016 YBR221W-AYBR221W-A 105 nt2.3□□□□□ -2.04
RPN3P40016 ATG11YPR049C 3537 nt2.3□□□□□ -2.04
RPN3P40016 UBP15YMR304W 3693 nt2.29□□□□□ -2.04
RPN3P40016 EDS1YBR033W 2760 nt2.29□□□□□ -2.04
RPN3P40016 PTP2YOR208W 2253 nt2.29□□□□□ -2.04
RPN3P40016 UBP1YDL122W 2430 nt2.29□□□□□ -2.04
RPN3P40016 PBY1YBR094W 2262 nt2.29□□□□□ -2.04
RPN3P40016 YOL098CYOL098C 3114 nt2.28□□□□□ -2.04
RPN3P40016 BRE1YDL074C 2103 nt2.28□□□□□ -2.04
RPN3P40016 SBE22YHR103W 2559 nt2.28□□□□□ -2.04
RPN3P40016 YDR354C-AYDR354C-A 144 nt2.27□□□□□ -2.05
RPN3P40016 YJL022WYJL022W 309 nt2.27□□□□□ -2.05
RPN3P40016 YKR075W-AYKR075W-A 270 nt2.27□□□□□ -2.05
RPN3P40016 RPS30BYOR182C 192 nt2.27□□□□□ -2.05
RPN3P40016 ALK1YGL021W 2283 nt2.27□□□□□ -2.05
RPN3P40016 KRE33YNL132W 3171 nt2.27□□□□□ -2.05
RPN3P40016 HMI1YOL095C 2121 nt2.27□□□□□ -2.05
RPN3P40016 SYH1YPL105C 2550 nt2.27□□□□□ -2.05
RPN3P40016 CDC60YPL160W 3273 nt2.27□□□□□ -2.05
RPN3P40016 YGR109W-BYGR109W-B 4644 nt2.26□□□□□ -2.05
RPN3P40016 YDR521WYDR521W 336 nt2.26□□□□□ -2.05
RPN3P40016 YER053C-AYER053C-A 114 nt2.26□□□□□ -2.05
RPN3P40016 YOR314W-AYOR314W-A 111 nt2.26□□□□□ -2.05
RPN3P40016 YMR045CYMR045C 5268 nt2.26□□□□□ -2.05
RPN3P40016 AGC1YPR021C 2709 nt2.25□□□□□ -2.05
RPN3P40016 YCR038W-AYCR038W-A 126 nt2.25□□□□□ -2.05
RPN3P40016 RPL37BYDR500C 267 nt2.25□□□□□ -2.05
RPN3P40016 YBR206WYBR206W 324 nt2.25□□□□□ -2.05
RPN3P40016 GYP5YPL249C 2685 nt2.25□□□□□ -2.05
RPN3P40016 YFR016CYFR016C 3702 nt2.25□□□□□ -2.05
RPN3P40016 TOF1YNL273W 3717 nt2.25□□□□□ -2.05
RPN3P40016 PET309YLR067C 2898 nt2.23□□□□□ -2.05
RPN3P40016 IRC8YJL051W 2469 nt2.23□□□□□ -2.05
RPN3P40016 IFH1YLR223C 3258 nt2.23□□□□□ -2.05
RPN3P40016 MDS3YGL197W 4464 nt2.23□□□□□ -2.05
RPN3P40016 TIM9YEL020W-A 264 nt2.22□□□□□ -2.05
RPN3P40016 YIL071W-AYIL071W-A 477 nt2.22□□□□□ -2.05
RPN3P40016 YMR175W-AYMR175W-A 195 nt2.22□□□□□ -2.05
RPN3P40016 UFD4YKL010C 4452 nt2.22□□□□□ -2.05
RPN3P40016 HIR3YJR140C 4947 nt2.22□□□□□ -2.05
RPN3P40016 USO1YDL058W 5373 nt2.21□□□□□ -2.06
RPN3P40016 PKH2YOL100W 3246 nt2.21□□□□□ -2.06
RPN3P40016 CTR9YOL145C 3234 nt2.21□□□□□ -2.06
RPN3P40016 COX12YLR038C 252 nt2.2□□□□□ -2.06
RPN3P40016 DGR1YNL130C-A 147 nt2.2□□□□□ -2.06
RPN3P40016 IRE1YHR079C 3348 nt2.2□□□□□ -2.06
RPN3P40016 CTF4YPR135W 2784 nt2.2□□□□□ -2.06
RPN3P40016 COG4YPR105C 2586 nt2.19□□□□□ -2.06
RPN3P40016 BUD2YKL092C 3315 nt2.19□□□□□ -2.06
RPN3P40016 PAA1YDR071C 576 nt2.19□□□□□ -2.06
RPN3P40016 YHR180W-AYHR180W-A 183 nt2.19□□□□□ -2.06
RPN3P40016 YNL144CYNL144C 2223 nt2.18□□□□□ -2.06
RPN3P40016 YCR087C-AYCR087C-A 462 nt2.18□□□□□ -2.06
RPN3P40016 YER172C-AYER172C-A 381 nt2.18□□□□□ -2.06
RPN3P40016 YJL026C-AYJL026C-A 222 nt2.18□□□□□ -2.06
RPN3P40016 CDC31YOR257W 486 nt2.18□□□□□ -2.06
RPN3P40016 RTT107YHR154W 3213 nt2.17□□□□□ -2.06
RPN3P40016 INO80YGL150C 4470 nt2.16□□□□□ -2.06
RPN3P40016 TFB5YDR079C-A 219 nt2.16□□□□□ -2.06
RPN3P40016 YFR012W-AYFR012W-A 87 nt2.16□□□□□ -2.06
RPN3P40016 SLI15YBR156C 2097 nt2.16□□□□□ -2.06
RPN3P40016 YLR419WYLR419W 4308 nt2.15□□□□□ -2.06
RPN3P40016 RTT101YJL047C 2529 nt2.15□□□□□ -2.07
RPN3P40016 tL(UAA)QtL(UAA)Q 85 nt2.15□□□□□ -2.07
RPN3P40016 SPP41YDR464W 4308 nt2.15□□□□□ -2.07
RPN3P40016 FRK1YPL141C 2598 nt2.15□□□□□ -2.07
RPN3P40016 UBR2YLR024C 5619 nt2.15□□□□□ -2.07
RPN3P40016 YDL118WYDL118W 381 nt2.14□□□□□ -2.07
RPN3P40016 YDR544CYDR544C 429 nt2.14□□□□□ -2.07
RPN3P40016 YOR093CYOR093C 4947 nt2.14□□□□□ -2.07
RPN3P40016 YHR214C-BYHR214C-B 5382 nt2.13□□□□□ -2.07
RPN3P40016 MSH6YDR097C 3729 nt2.13□□□□□ -2.07
RPN3P40016 PMP2YEL017C-A 132 nt2.12□□□□□ -2.07
RPN3P40016 TTI1YKL033W 3117 nt2.12□□□□□ -2.07
RPN3P40016 PRP5YBR237W 2550 nt2.11□□□□□ -2.07
RPN3P40016 YOR019WYOR019W 2193 nt2.11□□□□□ -2.07
RPN3P40016 YNL103W-AYNL103W-A 90 nt2.11□□□□□ -2.07
RPN3P40016 YBR099CYBR099C 384 nt2.11□□□□□ -2.07
RPN3P40016 YLR035C-AYLR035C-A 3468 nt2.1□□□□□ -2.07
RPN3P40016 YIL002W-AYIL002W-A 210 nt2.1□□□□□ -2.07
RPN3P40016 YMR326CYMR326C 309 nt2.1□□□□□ -2.07
RPN3P40016 APL1YJR005W 2103 nt2.09□□□□□ -2.07
RPN3P40016 FKS1YLR342W 5631 nt2.09□□□□□ -2.07
RPN3P40016 YLL054CYLL054C 2532 nt2.09□□□□□ -2.07
RPN3P40016 YCR095W-AYCR095W-A 159 nt2.09□□□□□ -2.07
RPN3P40016 CMC4YMR194C-B 222 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 41.8 ms