Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 YIL115W-AYIL115W-A 372 nt1.42□□□□□ -2.18
SHP1P34223 YBL008W-AYBL008W-A 240 nt1.42□□□□□ -2.18
SHP1P34223 BST1YFL025C 3090 nt1.42□□□□□ -2.18
SHP1P34223 SPT21YMR179W 2277 nt1.42□□□□□ -2.18
SHP1P34223 ADR1YDR216W 3972 nt1.42□□□□□ -2.18
SHP1P34223 YLR422WYLR422W 5799 nt1.42□□□□□ -2.18
SHP1P34223 YCK3YER123W 1575 nt1.42□□□□□ -2.18
SHP1P34223 COG4YPR105C 2586 nt1.42□□□□□ -2.18
SHP1P34223 VPS54YDR027C 2670 nt1.42□□□□□ -2.18
SHP1P34223 TRM732YMR259C 4263 nt1.41□□□□□ -2.18
SHP1P34223 MDS3YGL197W 4464 nt1.41□□□□□ -2.18
SHP1P34223 snR60snR60 104 nt1.41□□□□□ -2.18
SHP1P34223 YIR044CYIR044C 186 nt1.41□□□□□ -2.18
SHP1P34223 snR14snR14 160 nt1.41□□□□□ -2.18
SHP1P34223 YER181CYER181C 324 nt1.4□□□□□ -2.19
SHP1P34223 YHL042WYHL042W 453 nt1.4□□□□□ -2.19
SHP1P34223 CCH1YGR217W 6120 nt1.4□□□□□ -2.19
SHP1P34223 LCD1YDR499W 2244 nt1.4□□□□□ -2.19
SHP1P34223 PIP2YOR363C 2991 nt1.4□□□□□ -2.19
SHP1P34223 SSK2YNR031C 4740 nt1.39□□□□□ -2.19
SHP1P34223 FYV8YGR196C 2454 nt1.39□□□□□ -2.19
SHP1P34223 PET127YOR017W 2403 nt1.38□□□□□ -2.19
SHP1P34223 ALG13YGL047W 609 nt1.38□□□□□ -2.19
SHP1P34223 INA22YIR024C 651 nt1.38□□□□□ -2.19
SHP1P34223 CUL3YGR003W 2235 nt1.38□□□□□ -2.19
SHP1P34223 SPO75YLL005C 2607 nt1.37□□□□□ -2.19
SHP1P34223 YLL054CYLL054C 2532 nt1.37□□□□□ -2.19
SHP1P34223 SXM1YDR395W 2835 nt1.37□□□□□ -2.19
SHP1P34223 YML099W-AYML099W-A 330 nt1.36□□□□□ -2.19
SHP1P34223 PKH2YOL100W 3246 nt1.36□□□□□ -2.19
SHP1P34223 IML1YJR138W 4755 nt1.36□□□□□ -2.19
SHP1P34223 YLL007CYLL007C 1998 nt1.36□□□□□ -2.19
SHP1P34223 COG8YML071C 1824 nt1.36□□□□□ -2.19
SHP1P34223 ALY2YJL084C 3141 nt1.35□□□□□ -2.19
SHP1P34223 RAD61YDR014W 1944 nt1.35□□□□□ -2.19
SHP1P34223 VIK1YPL253C 1944 nt1.35□□□□□ -2.19
SHP1P34223 IFH1YLR223C 3258 nt1.35□□□□□ -2.19
SHP1P34223 FIG2YCR089W 4830 nt1.35□□□□□ -2.19
SHP1P34223 YCS4YLR272C 3531 nt1.35□□□□□ -2.19
SHP1P34223 HKR1YDR420W 5409 nt1.34□□□□□ -2.19
SHP1P34223 YGR069WYGR069W 336 nt1.34□□□□□ -2.19
SHP1P34223 YJL120WYJL120W 324 nt1.34□□□□□ -2.19
SHP1P34223 EST2YLR318W 2655 nt1.33□□□□□ -2.2
SHP1P34223 SPO21YOL091W 1830 nt1.33□□□□□ -2.2
SHP1P34223 PTP2YOR208W 2253 nt1.33□□□□□ -2.2
SHP1P34223 NUP188YML103C 4968 nt1.33□□□□□ -2.2
SHP1P34223 HMRA2YCR096C 360 nt1.33□□□□□ -2.2
SHP1P34223 YDR521WYDR521W 336 nt1.33□□□□□ -2.2
SHP1P34223 PIK1YNL267W 3201 nt1.33□□□□□ -2.2
SHP1P34223 SLD3YGL113W 2007 nt1.32□□□□□ -2.2
SHP1P34223 GPG1YGL121C 381 nt1.32□□□□□ -2.2
SHP1P34223 YJL015CYJL015C 285 nt1.32□□□□□ -2.2
SHP1P34223 RPS25BYLR333C 327 nt1.32□□□□□ -2.2
SHP1P34223 YOR161W-BYOR161W-B 261 nt1.32□□□□□ -2.2
SHP1P34223 RPL33BYOR234C 324 nt1.32□□□□□ -2.2
SHP1P34223 YDL206WYDL206W 2289 nt1.31□□□□□ -2.2
SHP1P34223 AIM44YPL158C 2277 nt1.31□□□□□ -2.2
SHP1P34223 AZF1YOR113W 2745 nt1.31□□□□□ -2.2
SHP1P34223 tV(UAC)BtV(UAC)B 74 nt1.31□□□□□ -2.2
SHP1P34223 tV(UAC)DtV(UAC)D 74 nt1.31□□□□□ -2.2
SHP1P34223 CSE2YNR010W 450 nt1.31□□□□□ -2.2
SHP1P34223 YBR206WYBR206W 324 nt1.31□□□□□ -2.2
SHP1P34223 MMS4YBR098W 2076 nt1.31□□□□□ -2.2
SHP1P34223 SIP4YJL089W 2490 nt1.31□□□□□ -2.2
SHP1P34223 SWI4YER111C 3282 nt1.31□□□□□ -2.2
SHP1P34223 YMR321CYMR321C 318 nt1.3□□□□□ -2.2
SHP1P34223 YNL028WYNL028W 318 nt1.3□□□□□ -2.2
SHP1P34223 FIG4YNL325C 2640 nt1.3□□□□□ -2.2
SHP1P34223 PBY1YBR094W 2262 nt1.29□□□□□ -2.2
SHP1P34223 RPS27BYHR021C 249 nt1.29□□□□□ -2.2
SHP1P34223 SET3YKR029C 2256 nt1.29□□□□□ -2.2
SHP1P34223 APL3YBL037W 3078 nt1.28□□□□□ -2.2
SHP1P34223 YOR008C-AYOR008C-A 225 nt1.28□□□□□ -2.2
SHP1P34223 YOR015WYOR015W 360 nt1.28□□□□□ -2.2
SHP1P34223 YPL152W-AYPL152W-A 99 nt1.28□□□□□ -2.2
SHP1P34223 YBR221W-AYBR221W-A 105 nt1.28□□□□□ -2.2
SHP1P34223 YEL020C-BYEL020C-B 198 nt1.27□□□□□ -2.21
SHP1P34223 YLL020CYLL020C 306 nt1.27□□□□□ -2.21
SHP1P34223 YOR011W-AYOR011W-A 207 nt1.27□□□□□ -2.21
SHP1P34223 RPS30BYOR182C 192 nt1.27□□□□□ -2.21
SHP1P34223 YOR218CYOR218C 420 nt1.27□□□□□ -2.21
SHP1P34223 PDE2YOR360C 1581 nt1.26□□□□□ -2.21
SHP1P34223 STO1YMR125W 2586 nt1.26□□□□□ -2.21
SHP1P34223 YLR120W-AYLR120W-A 102 nt1.26□□□□□ -2.21
SHP1P34223 PAN2YGL094C 3348 nt1.26□□□□□ -2.21
SHP1P34223 YAR009CYAR009C 3591 nt1.25□□□□□ -2.21
SHP1P34223 YCR022CYCR022C 345 nt1.25□□□□□ -2.21
SHP1P34223 IES4YOR189W 351 nt1.25□□□□□ -2.21
SHP1P34223 CDC39YCR093W 6327 nt1.25□□□□□ -2.21
SHP1P34223 MSN5YDR335W 3675 nt1.25□□□□□ -2.21
SHP1P34223 YOR282WYOR282W 321 nt1.24□□□□□ -2.21
SHP1P34223 SEC21YNL287W 2808 nt1.24□□□□□ -2.21
SHP1P34223 AHC1YOR023C 1701 nt1.23□□□□□ -2.21
SHP1P34223 YMR172C-AYMR172C-A 384 nt1.23□□□□□ -2.21
SHP1P34223 CDC36YDL165W 576 nt1.22□□□□□ -2.21
SHP1P34223 YGL052WYGL052W 306 nt1.22□□□□□ -2.21
SHP1P34223 YHR063W-AYHR063W-A 336 nt1.22□□□□□ -2.21
SHP1P34223 YJL197C-AYJL197C-A 282 nt1.22□□□□□ -2.21
SHP1P34223 YBR064WYBR064W 429 nt1.22□□□□□ -2.21
SHP1P34223 NUP145YGL092W 3954 nt1.22□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 58.1 ms