Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 SSD1YDR293C 3753 nt2.48□□□□□ -2.01
VPS35P34110 PIP2YOR363C 2991 nt2.48□□□□□ -2.01
VPS35P34110 AIM44YPL158C 2277 nt2.47□□□□□ -2.01
VPS35P34110 YHR210CYHR210C 1026 nt2.47□□□□□ -2.01
VPS35P34110 AHC1YOR023C 1701 nt2.47□□□□□ -2.01
VPS35P34110 COY1YKL179C 2040 nt2.47□□□□□ -2.01
VPS35P34110 FIG4YNL325C 2640 nt2.47□□□□□ -2.01
VPS35P34110 BUD2YKL092C 3315 nt2.47□□□□□ -2.01
VPS35P34110 IRE1YHR079C 3348 nt2.45□□□□□ -2.02
VPS35P34110 CSF1YLR087C 8877 nt2.44□□□□□ -2.02
VPS35P34110 DNF1YER166W 4716 nt2.44□□□□□ -2.02
VPS35P34110 ALK1YGL021W 2283 nt2.43□□□□□ -2.02
VPS35P34110 TDA9YML081W 3756 nt2.42□□□□□ -2.02
VPS35P34110 HAL9YOL089C 3093 nt2.42□□□□□ -2.02
VPS35P34110 HIR3YJR140C 4947 nt2.42□□□□□ -2.02
VPS35P34110 IST2YBR086C 2841 nt2.42□□□□□ -2.02
VPS35P34110 SLD3YGL113W 2007 nt2.41□□□□□ -2.02
VPS35P34110 YDR521WYDR521W 336 nt2.41□□□□□ -2.02
VPS35P34110 YMR175W-AYMR175W-A 195 nt2.41□□□□□ -2.02
VPS35P34110 YLR035C-AYLR035C-A 3468 nt2.4□□□□□ -2.02
VPS35P34110 PRP42YDR235W 1635 nt2.4□□□□□ -2.03
VPS35P34110 YDL118WYDL118W 381 nt2.4□□□□□ -2.03
VPS35P34110 YIL020C-AYIL020C-A 339 nt2.4□□□□□ -2.03
VPS35P34110 YNL205CYNL205C 423 nt2.4□□□□□ -2.03
VPS35P34110 TOF1YNL273W 3717 nt2.4□□□□□ -2.03
VPS35P34110 KOG1YHR186C 4674 nt2.4□□□□□ -2.03
VPS35P34110 UTP22YGR090W 3714 nt2.4□□□□□ -2.03
VPS35P34110 YNL144CYNL144C 2223 nt2.4□□□□□ -2.03
VPS35P34110 IFH1YLR223C 3258 nt2.39□□□□□ -2.03
VPS35P34110 FRK1YPL141C 2598 nt2.39□□□□□ -2.03
VPS35P34110 PBY1YBR094W 2262 nt2.38□□□□□ -2.03
VPS35P34110 YBL053WYBL053W 375 nt2.38□□□□□ -2.03
VPS35P34110 TFC3YAL001C 3483 nt2.38□□□□□ -2.03
VPS35P34110 YOL098CYOL098C 3114 nt2.37□□□□□ -2.03
VPS35P34110 COG4YPR105C 2586 nt2.37□□□□□ -2.03
VPS35P34110 SLI15YBR156C 2097 nt2.37□□□□□ -2.03
VPS35P34110 SAP185YJL098W 3177 nt2.37□□□□□ -2.03
VPS35P34110 IRC8YJL051W 2469 nt2.36□□□□□ -2.03
VPS35P34110 PKH2YOL100W 3246 nt2.36□□□□□ -2.03
VPS35P34110 SNU13YEL026W 381 nt2.36□□□□□ -2.03
VPS35P34110 YBR206WYBR206W 324 nt2.36□□□□□ -2.03
VPS35P34110 SBE22YHR103W 2559 nt2.36□□□□□ -2.03
VPS35P34110 SEY1YOR165W 2331 nt2.35□□□□□ -2.03
VPS35P34110 HSL1YKL101W 4557 nt2.35□□□□□ -2.03
VPS35P34110 snR85snR85 171 nt2.35□□□□□ -2.03
VPS35P34110 YJL052C-AYJL052C-A 120 nt2.35□□□□□ -2.03
VPS35P34110 YKL165C-AYKL165C-A 234 nt2.35□□□□□ -2.03
VPS35P34110 snR48snR48 113 nt2.34□□□□□ -2.03
VPS35P34110 HER1YOR227W 3741 nt2.34□□□□□ -2.04
VPS35P34110 TOR2YKL203C 7425 nt2.33□□□□□ -2.04
VPS35P34110 INO80YGL150C 4470 nt2.33□□□□□ -2.04
VPS35P34110 YDR354C-AYDR354C-A 144 nt2.33□□□□□ -2.04
VPS35P34110 YGR109W-BYGR109W-B 4644 nt2.32□□□□□ -2.04
VPS35P34110 SEC63YOR254C 1992 nt2.32□□□□□ -2.04
VPS35P34110 SFB2YNL049C 2631 nt2.32□□□□□ -2.04
VPS35P34110 BRE1YDL074C 2103 nt2.32□□□□□ -2.04
VPS35P34110 YHR180W-AYHR180W-A 183 nt2.31□□□□□ -2.04
VPS35P34110 USO1YDL058W 5373 nt2.31□□□□□ -2.04
VPS35P34110 YIL134C-AYIL134C-A 204 nt2.3□□□□□ -2.04
VPS35P34110 YJL026C-AYJL026C-A 222 nt2.29□□□□□ -2.04
VPS35P34110 RPS30BYOR182C 192 nt2.29□□□□□ -2.04
VPS35P34110 YBR221W-AYBR221W-A 105 nt2.29□□□□□ -2.04
VPS35P34110 UFD4YKL010C 4452 nt2.29□□□□□ -2.04
VPS35P34110 GYP5YPL249C 2685 nt2.29□□□□□ -2.04
VPS35P34110 MSH6YDR097C 3729 nt2.28□□□□□ -2.04
VPS35P34110 DGR1YNL130C-A 147 nt2.28□□□□□ -2.04
VPS35P34110 YPL044CYPL044C 549 nt2.28□□□□□ -2.04
VPS35P34110 SPO24YPR036W-A 204 nt2.28□□□□□ -2.04
VPS35P34110 UTP21YLR409C 2820 nt2.28□□□□□ -2.04
VPS35P34110 FAB1YFR019W 6837 nt2.27□□□□□ -2.05
VPS35P34110 FKS1YLR342W 5631 nt2.26□□□□□ -2.05
VPS35P34110 ADR1YDR216W 3972 nt2.25□□□□□ -2.05
VPS35P34110 PAA1YDR071C 576 nt2.25□□□□□ -2.05
VPS35P34110 MYO4YAL029C 4416 nt2.25□□□□□ -2.05
VPS35P34110 UBR2YLR024C 5619 nt2.24□□□□□ -2.05
VPS35P34110 YER172C-AYER172C-A 381 nt2.24□□□□□ -2.05
VPS35P34110 YHL015W-AYHL015W-A 84 nt2.24□□□□□ -2.05
VPS35P34110 COX12YLR038C 252 nt2.23□□□□□ -2.05
VPS35P34110 YHR214C-BYHR214C-B 5382 nt2.23□□□□□ -2.05
VPS35P34110 NUT1YGL151W 3399 nt2.23□□□□□ -2.05
VPS35P34110 MDS3YGL197W 4464 nt2.23□□□□□ -2.05
VPS35P34110 ATG9YDL149W 2994 nt2.22□□□□□ -2.05
VPS35P34110 YCR038W-AYCR038W-A 126 nt2.22□□□□□ -2.05
VPS35P34110 UBP2YOR124C 3819 nt2.22□□□□□ -2.05
VPS35P34110 RGA1YOR127W 3024 nt2.21□□□□□ -2.06
VPS35P34110 YOR102WYOR102W 351 nt2.21□□□□□ -2.06
VPS35P34110 APL1YJR005W 2103 nt2.21□□□□□ -2.06
VPS35P34110 SEC31YDL195W 3822 nt2.21□□□□□ -2.06
VPS35P34110 TTI1YKL033W 3117 nt2.2□□□□□ -2.06
VPS35P34110 PDR8YLR266C 2106 nt2.2□□□□□ -2.06
VPS35P34110 BPH1YCR032W 6504 nt2.2□□□□□ -2.06
VPS35P34110 YDL206WYDL206W 2289 nt2.2□□□□□ -2.06
VPS35P34110 TRM3YDL112W 4311 nt2.2□□□□□ -2.06
VPS35P34110 YJR039WYJR039W 3366 nt2.19□□□□□ -2.06
VPS35P34110 SPP41YDR464W 4308 nt2.19□□□□□ -2.06
VPS35P34110 YMR045CYMR045C 5268 nt2.19□□□□□ -2.06
VPS35P34110 EMC5YIL027C 426 nt2.19□□□□□ -2.06
VPS35P34110 MGA2YIR033W 3342 nt2.19□□□□□ -2.06
VPS35P34110 RAD50YNL250W 3939 nt2.18□□□□□ -2.06
VPS35P34110 CTF4YPR135W 2784 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 22 ms