Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 HAL9YOL089C 3093 nt2.11□□□□□ -2.07
RPD3P32561 CSF1YLR087C 8877 nt2.1□□□□□ -2.07
RPD3P32561 PMP1YCR024C-A 123 nt2.1□□□□□ -2.07
RPD3P32561 STE11YLR362W 2154 nt2.1□□□□□ -2.07
RPD3P32561 SLD3YGL113W 2007 nt2.1□□□□□ -2.07
RPD3P32561 SBE22YHR103W 2559 nt2.09□□□□□ -2.07
RPD3P32561 SCP160YJL080C 3669 nt2.09□□□□□ -2.07
RPD3P32561 FRK1YPL141C 2598 nt2.09□□□□□ -2.07
RPD3P32561 PBY1YBR094W 2262 nt2.08□□□□□ -2.08
RPD3P32561 YNL205CYNL205C 423 nt2.08□□□□□ -2.08
RPD3P32561 PDR3YBL005W 2931 nt2.08□□□□□ -2.08
RPD3P32561 SEY1YOR165W 2331 nt2.08□□□□□ -2.08
RPD3P32561 COY1YKL179C 2040 nt2.08□□□□□ -2.08
RPD3P32561 BNI1YNL271C 5862 nt2.08□□□□□ -2.08
RPD3P32561 IRC8YJL051W 2469 nt2.07□□□□□ -2.08
RPD3P32561 YDR521WYDR521W 336 nt2.07□□□□□ -2.08
RPD3P32561 YBR221W-AYBR221W-A 105 nt2.07□□□□□ -2.08
RPD3P32561 SAP190YKR028W 3102 nt2.07□□□□□ -2.08
RPD3P32561 STH1YIL126W 4080 nt2.07□□□□□ -2.08
RPD3P32561 ALK1YGL021W 2283 nt2.07□□□□□ -2.08
RPD3P32561 PRP42YDR235W 1635 nt2.06□□□□□ -2.08
RPD3P32561 AHC1YOR023C 1701 nt2.06□□□□□ -2.08
RPD3P32561 snR85snR85 171 nt2.06□□□□□ -2.08
RPD3P32561 IFH1YLR223C 3258 nt2.06□□□□□ -2.08
RPD3P32561 DNF1YER166W 4716 nt2.05□□□□□ -2.08
RPD3P32561 SLI15YBR156C 2097 nt2.05□□□□□ -2.08
RPD3P32561 IRA2YOL081W 9240 nt2.05□□□□□ -2.08
RPD3P32561 YIL020C-AYIL020C-A 339 nt2.04□□□□□ -2.08
RPD3P32561 YMR175W-AYMR175W-A 195 nt2.04□□□□□ -2.08
RPD3P32561 APL5YPL195W 2799 nt2.04□□□□□ -2.08
RPD3P32561 HER1YOR227W 3741 nt2.04□□□□□ -2.08
RPD3P32561 SEC63YOR254C 1992 nt2.03□□□□□ -2.08
RPD3P32561 MSH6YDR097C 3729 nt2.03□□□□□ -2.08
RPD3P32561 PKH2YOL100W 3246 nt2.03□□□□□ -2.08
RPD3P32561 SAP185YJL098W 3177 nt2.03□□□□□ -2.08
RPD3P32561 YNL144CYNL144C 2223 nt2.02□□□□□ -2.09
RPD3P32561 YDL118WYDL118W 381 nt2.02□□□□□ -2.09
RPD3P32561 SCD5YOR329C 2619 nt2.02□□□□□ -2.09
RPD3P32561 COG4YPR105C 2586 nt2.02□□□□□ -2.09
RPD3P32561 TRM3YDL112W 4311 nt2.01□□□□□ -2.09
RPD3P32561 HSL1YKL101W 4557 nt2.01□□□□□ -2.09
RPD3P32561 CHC1YGL206C 4962 nt2□□□□□ -2.09
RPD3P32561 SFB2YNL049C 2631 nt2□□□□□ -2.09
RPD3P32561 GCN2YDR283C 4980 nt2□□□□□ -2.09
RPD3P32561 PDR11YIL013C 4236 nt2□□□□□ -2.09
RPD3P32561 snR48snR48 113 nt1.99□□□□□ -2.09
RPD3P32561 MSB1YOR188W 3414 nt1.98□□□□□ -2.09
RPD3P32561 ADR1YDR216W 3972 nt1.98□□□□□ -2.09
RPD3P32561 NUP170YBL079W 4509 nt1.98□□□□□ -2.09
RPD3P32561 YBR206WYBR206W 324 nt1.97□□□□□ -2.09
RPD3P32561 UTP21YLR409C 2820 nt1.97□□□□□ -2.09
RPD3P32561 SLN1YIL147C 3663 nt1.96□□□□□ -2.1
RPD3P32561 HIR3YJR140C 4947 nt1.95□□□□□ -2.1
RPD3P32561 YDR354C-AYDR354C-A 144 nt1.95□□□□□ -2.1
RPD3P32561 YJL026C-AYJL026C-A 222 nt1.95□□□□□ -2.1
RPD3P32561 TFC3YAL001C 3483 nt1.95□□□□□ -2.1
RPD3P32561 UBP2YOR124C 3819 nt1.95□□□□□ -2.1
RPD3P32561 APL1YJR005W 2103 nt1.94□□□□□ -2.1
RPD3P32561 YHL015W-AYHL015W-A 84 nt1.94□□□□□ -2.1
RPD3P32561 YPL044CYPL044C 549 nt1.94□□□□□ -2.1
RPD3P32561 YOR343W-BYOR343W-B 5313 nt1.94□□□□□ -2.1
RPD3P32561 YJR039WYJR039W 3366 nt1.94□□□□□ -2.1
RPD3P32561 SPP41YDR464W 4308 nt1.93□□□□□ -2.1
RPD3P32561 RPS30BYOR182C 192 nt1.93□□□□□ -2.1
RPD3P32561 SPO24YPR036W-A 204 nt1.93□□□□□ -2.1
RPD3P32561 NEO1YIL048W 3456 nt1.93□□□□□ -2.1
RPD3P32561 YMR045CYMR045C 5268 nt1.93□□□□□ -2.1
RPD3P32561 NUT1YGL151W 3399 nt1.93□□□□□ -2.1
RPD3P32561 SEC16YPL085W 6588 nt1.93□□□□□ -2.1
RPD3P32561 YOR102WYOR102W 351 nt1.92□□□□□ -2.1
RPD3P32561 UFD4YKL010C 4452 nt1.92□□□□□ -2.1
RPD3P32561 SEC31YDL195W 3822 nt1.91□□□□□ -2.1
RPD3P32561 PAA1YDR071C 576 nt1.91□□□□□ -2.1
RPD3P32561 YIL134C-AYIL134C-A 204 nt1.91□□□□□ -2.1
RPD3P32561 COX12YLR038C 252 nt1.91□□□□□ -2.1
RPD3P32561 YBL053WYBL053W 375 nt1.91□□□□□ -2.1
RPD3P32561 DGR1YNL130C-A 147 nt1.91□□□□□ -2.1
RPD3P32561 TTI1YKL033W 3117 nt1.91□□□□□ -2.1
RPD3P32561 CTF4YPR135W 2784 nt1.91□□□□□ -2.1
RPD3P32561 ATG9YDL149W 2994 nt1.9□□□□□ -2.1
RPD3P32561 EMC5YIL027C 426 nt1.9□□□□□ -2.11
RPD3P32561 YJL052C-AYJL052C-A 120 nt1.9□□□□□ -2.11
RPD3P32561 YOR314W-AYOR314W-A 111 nt1.9□□□□□ -2.11
RPD3P32561 YDL206WYDL206W 2289 nt1.9□□□□□ -2.11
RPD3P32561 MYO4YAL029C 4416 nt1.9□□□□□ -2.11
RPD3P32561 ALY2YJL084C 3141 nt1.89□□□□□ -2.11
RPD3P32561 USO1YDL058W 5373 nt1.88□□□□□ -2.11
RPD3P32561 YGR109W-BYGR109W-B 4644 nt1.88□□□□□ -2.11
RPD3P32561 PAN2YGL094C 3348 nt1.88□□□□□ -2.11
RPD3P32561 PDR8YLR266C 2106 nt1.87□□□□□ -2.11
RPD3P32561 YCR038W-AYCR038W-A 126 nt1.86□□□□□ -2.11
RPD3P32561 YIL002W-AYIL002W-A 210 nt1.86□□□□□ -2.11
RPD3P32561 YJL022WYJL022W 309 nt1.86□□□□□ -2.11
RPD3P32561 YNL211CYNL211C 261 nt1.86□□□□□ -2.11
RPD3P32561 KOG1YHR186C 4674 nt1.86□□□□□ -2.11
RPD3P32561 BRE1YDL074C 2103 nt1.85□□□□□ -2.11
RPD3P32561 BPH1YCR032W 6504 nt1.85□□□□□ -2.11
RPD3P32561 MGA2YIR033W 3342 nt1.85□□□□□ -2.11
RPD3P32561 TMA7YLR262C-A 195 nt1.85□□□□□ -2.11
RPD3P32561 MMS4YBR098W 2076 nt1.85□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 117.3 ms