Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 KAP122YGL016W 3246 nt1.21□□□□□ -2.22
RPN8Q08723 AIM9YER080W 1884 nt1.21□□□□□ -2.22
RPN8Q08723 NCA2YPR155C 1851 nt1.21□□□□□ -2.22
RPN8Q08723 YDR182W-AYDR182W-A 204 nt1.21□□□□□ -2.22
RPN8Q08723 YGL217CYGL217C 342 nt1.21□□□□□ -2.22
RPN8Q08723 YIL059CYIL059C 366 nt1.21□□□□□ -2.22
RPN8Q08723 snR14snR14 160 nt1.21□□□□□ -2.22
RPN8Q08723 YOR376WYOR376W 369 nt1.21□□□□□ -2.22
RPN8Q08723 SLX4YLR135W 2247 nt1.21□□□□□ -2.22
RPN8Q08723 NST1YNL091W 3723 nt1.2□□□□□ -2.22
RPN8Q08723 YHR138CYHR138C 345 nt1.2□□□□□ -2.22
RPN8Q08723 EMC5YIL027C 426 nt1.2□□□□□ -2.22
RPN8Q08723 VPS55YJR044C 423 nt1.2□□□□□ -2.22
RPN8Q08723 UPS1YLR193C 528 nt1.2□□□□□ -2.22
RPN8Q08723 TIM18YOR297C 579 nt1.2□□□□□ -2.22
RPN8Q08723 YPL229WYPL229W 621 nt1.2□□□□□ -2.22
RPN8Q08723 NUT2YPR168W 474 nt1.2□□□□□ -2.22
RPN8Q08723 NUP188YML103C 4968 nt1.19□□□□□ -2.22
RPN8Q08723 YER137W-AYER137W-A 306 nt1.19□□□□□ -2.22
RPN8Q08723 SIP4YJL089W 2490 nt1.19□□□□□ -2.22
RPN8Q08723 SDH2YLL041C 801 nt1.19□□□□□ -2.22
RPN8Q08723 RPL33BYOR234C 324 nt1.19□□□□□ -2.22
RPN8Q08723 YSY6YBR162W-A 198 nt1.19□□□□□ -2.22
RPN8Q08723 PIG1YLR273C 1947 nt1.19□□□□□ -2.22
RPN8Q08723 YKL202WYKL202W 582 nt1.18□□□□□ -2.22
RPN8Q08723 YLR154W-FYLR154W-F 141 nt1.18□□□□□ -2.22
RPN8Q08723 YMR001C-AYMR001C-A 231 nt1.18□□□□□ -2.22
RPN8Q08723 SGO1YOR073W 1773 nt1.18□□□□□ -2.22
RPN8Q08723 YGR174W-AYGR174W-A 87 nt1.17□□□□□ -2.22
RPN8Q08723 YMR175W-AYMR175W-A 195 nt1.17□□□□□ -2.22
RPN8Q08723 YOR053WYOR053W 342 nt1.17□□□□□ -2.22
RPN8Q08723 RPB10YOR210W 213 nt1.17□□□□□ -2.22
RPN8Q08723 MSN5YDR335W 3675 nt1.17□□□□□ -2.22
RPN8Q08723 YJL015CYJL015C 285 nt1.16□□□□□ -2.22
RPN8Q08723 YJL135WYJL135W 318 nt1.16□□□□□ -2.22
RPN8Q08723 BSC3YLR465C 309 nt1.16□□□□□ -2.22
RPN8Q08723 snR51snR51 107 nt1.16□□□□□ -2.22
RPN8Q08723 ENV11YGR071C 2583 nt1.16□□□□□ -2.22
RPN8Q08723 snR72snR72 98 nt1.15□□□□□ -2.23
RPN8Q08723 YDL211CYDL211C 1119 nt1.15□□□□□ -2.23
RPN8Q08723 PAM16YJL104W 450 nt1.15□□□□□ -2.23
RPN8Q08723 SLY1YDR189W 2001 nt1.15□□□□□ -2.23
RPN8Q08723 EST2YLR318W 2655 nt1.14□□□□□ -2.23
RPN8Q08723 SAS3YBL052C 2496 nt1.14□□□□□ -2.23
RPN8Q08723 VPS54YDR027C 2670 nt1.14□□□□□ -2.23
RPN8Q08723 NOC3YLR002C 1992 nt1.14□□□□□ -2.23
RPN8Q08723 DOP1YDR141C 5097 nt1.14□□□□□ -2.23
RPN8Q08723 AZF1YOR113W 2745 nt1.13□□□□□ -2.23
RPN8Q08723 YDR157WYDR157W 402 nt1.13□□□□□ -2.23
RPN8Q08723 RRT15YLR162W-A 189 nt1.13□□□□□ -2.23
RPN8Q08723 SCW11YGL028C 1629 nt1.13□□□□□ -2.23
RPN8Q08723 YAL068W-AYAL068W-A 255 nt1.12□□□□□ -2.23
RPN8Q08723 YMR242W-AYMR242W-A 90 nt1.12□□□□□ -2.23
RPN8Q08723 RPS30BYOR182C 192 nt1.12□□□□□ -2.23
RPN8Q08723 MUK1YPL070W 1839 nt1.12□□□□□ -2.23
RPN8Q08723 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
RPN8Q08723 YPR137C-BYPR137C-B 5268 nt1.12□□□□□ -2.23
RPN8Q08723 YFL019CYFL019C 354 nt1.11□□□□□ -2.23
RPN8Q08723 PAU12YGR294W 363 nt1.11□□□□□ -2.23
RPN8Q08723 APL1YJR005W 2103 nt1.11□□□□□ -2.23
RPN8Q08723 YOR121CYOR121C 306 nt1.11□□□□□ -2.23
RPN8Q08723 PAU24YBR301W 363 nt1.11□□□□□ -2.23
RPN8Q08723 BEM2YER155C 6504 nt1.11□□□□□ -2.23
RPN8Q08723 SPT7YBR081C 3999 nt1.11□□□□□ -2.23
RPN8Q08723 VAM6YDL077C 3150 nt1.1□□□□□ -2.23
RPN8Q08723 ZIP2YGL249W 2115 nt1.1□□□□□ -2.23
RPN8Q08723 IRC23YOR044W 474 nt1.1□□□□□ -2.23
RPN8Q08723 YOR072W-AYOR072W-A 249 nt1.1□□□□□ -2.23
RPN8Q08723 YOR199WYOR199W 330 nt1.1□□□□□ -2.23
RPN8Q08723 YLL054CYLL054C 2532 nt1.09□□□□□ -2.23
RPN8Q08723 NPC2YDL046W 522 nt1.09□□□□□ -2.23
RPN8Q08723 YNL058CYNL058C 951 nt1.09□□□□□ -2.23
RPN8Q08723 ROM2YLR371W 4071 nt1.08□□□□□ -2.24
RPN8Q08723 YDR118W-AYDR118W-A 117 nt1.08□□□□□ -2.24
RPN8Q08723 RPS20YHL015W 366 nt1.08□□□□□ -2.24
RPN8Q08723 SLD3YGL113W 2007 nt1.08□□□□□ -2.24
RPN8Q08723 SPT21YMR179W 2277 nt1.08□□□□□ -2.24
RPN8Q08723 MPT5YGL178W 2580 nt1.07□□□□□ -2.24
RPN8Q08723 NUT1YGL151W 3399 nt1.07□□□□□ -2.24
RPN8Q08723 SCC2YDR180W 4482 nt1.07□□□□□ -2.24
RPN8Q08723 ATG31YDR022C 591 nt1.07□□□□□ -2.24
RPN8Q08723 RPL34BYIL052C 366 nt1.07□□□□□ -2.24
RPN8Q08723 YBL008W-AYBL008W-A 240 nt1.07□□□□□ -2.24
RPN8Q08723 INP2YMR163C 2118 nt1.06□□□□□ -2.24
RPN8Q08723 CSN9YDR179C 489 nt1.06□□□□□ -2.24
RPN8Q08723 tW(UCA)QtW(UCA)Q 74 nt1.06□□□□□ -2.24
RPN8Q08723 INA22YIR024C 651 nt1.06□□□□□ -2.24
RPN8Q08723 YOL160WYOL160W 342 nt1.06□□□□□ -2.24
RPN8Q08723 YPR063CYPR063C 423 nt1.06□□□□□ -2.24
RPN8Q08723 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
RPN8Q08723 LCD1YDR499W 2244 nt1.05□□□□□ -2.24
RPN8Q08723 YJR003CYJR003C 1560 nt1.05□□□□□ -2.24
RPN8Q08723 YLL020CYLL020C 306 nt1.05□□□□□ -2.24
RPN8Q08723 YAR053WYAR053W 297 nt1.05□□□□□ -2.24
RPN8Q08723 FIG4YNL325C 2640 nt1.05□□□□□ -2.24
RPN8Q08723 YDR426CYDR426C 378 nt1.04□□□□□ -2.24
RPN8Q08723 YPR002C-AYPR002C-A 198 nt1.04□□□□□ -2.24
RPN8Q08723 APL3YBL037W 3078 nt1.04□□□□□ -2.24
RPN8Q08723 tF(GAA)BtF(GAA)B 73 nt1.03□□□□□ -2.24
RPN8Q08723 tF(GAA)FtF(GAA)F 73 nt1.03□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 53.5 ms