Protein–RNA interactions for Protein: Q02100

SKO1, CRE-binding bZIP protein SKO1, yeastyeast

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKO1Q02100 NUP192YJL039C 5052 nt1.38□□□□□ -2.19
SKO1Q02100 IRA1YBR140C 9279 nt1.38□□□□□ -2.19
SKO1Q02100 ZIP2YGL249W 2115 nt1.37□□□□□ -2.19
SKO1Q02100 YOR199WYOR199W 330 nt1.37□□□□□ -2.19
SKO1Q02100 snR14snR14 160 nt1.37□□□□□ -2.19
SKO1Q02100 POL5YEL055C 3069 nt1.36□□□□□ -2.19
SKO1Q02100 INP2YMR163C 2118 nt1.36□□□□□ -2.19
SKO1Q02100 CCH1YGR217W 6120 nt1.36□□□□□ -2.19
SKO1Q02100 YAR053WYAR053W 297 nt1.36□□□□□ -2.19
SKO1Q02100 YCS4YLR272C 3531 nt1.36□□□□□ -2.19
SKO1Q02100 YLR334CYLR334C 381 nt1.36□□□□□ -2.19
SKO1Q02100 YBP1YBR216C 2025 nt1.36□□□□□ -2.19
SKO1Q02100 SCW11YGL028C 1629 nt1.36□□□□□ -2.19
SKO1Q02100 YNL284C-BYNL284C-B 5268 nt1.35□□□□□ -2.19
SKO1Q02100 MDS3YGL197W 4464 nt1.35□□□□□ -2.19
SKO1Q02100 YLL054CYLL054C 2532 nt1.35□□□□□ -2.19
SKO1Q02100 MEC1YBR136W 7107 nt1.35□□□□□ -2.19
SKO1Q02100 AZF1YOR113W 2745 nt1.35□□□□□ -2.19
SKO1Q02100 YGR035CYGR035C 351 nt1.35□□□□□ -2.19
SKO1Q02100 tQ(UUG)E2tQ(UUG)E2 72 nt1.35□□□□□ -2.19
SKO1Q02100 YJL135WYJL135W 318 nt1.35□□□□□ -2.19
SKO1Q02100 RPL38YLR325C 237 nt1.35□□□□□ -2.19
SKO1Q02100 YSY6YBR162W-A 198 nt1.35□□□□□ -2.19
SKO1Q02100 YBR174CYBR174C 315 nt1.35□□□□□ -2.19
SKO1Q02100 PET127YOR017W 2403 nt1.34□□□□□ -2.19
SKO1Q02100 NPC2YDL046W 522 nt1.34□□□□□ -2.19
SKO1Q02100 YDL211CYDL211C 1119 nt1.34□□□□□ -2.19
SKO1Q02100 RPS20YHL015W 366 nt1.34□□□□□ -2.19
SKO1Q02100 YML007C-AYML007C-A 111 nt1.34□□□□□ -2.19
SKO1Q02100 CLU1YMR012W 3834 nt1.34□□□□□ -2.19
SKO1Q02100 YOL160WYOL160W 342 nt1.34□□□□□ -2.19
SKO1Q02100 YOR108C-AYOR108C-A 210 nt1.34□□□□□ -2.19
SKO1Q02100 NUP188YML103C 4968 nt1.34□□□□□ -2.2
SKO1Q02100 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
SKO1Q02100 YAL063C-AYAL063C-A 291 nt1.33□□□□□ -2.2
SKO1Q02100 YPL261CYPL261C 309 nt1.33□□□□□ -2.2
SKO1Q02100 MAD1YGL086W 2250 nt1.32□□□□□ -2.2
SKO1Q02100 YOR161W-BYOR161W-B 261 nt1.32□□□□□ -2.2
SKO1Q02100 CDC31YOR257W 486 nt1.32□□□□□ -2.2
SKO1Q02100 SEC21YNL287W 2808 nt1.31□□□□□ -2.2
SKO1Q02100 MSN5YDR335W 3675 nt1.31□□□□□ -2.2
SKO1Q02100 SPT21YMR179W 2277 nt1.31□□□□□ -2.2
SKO1Q02100 CSN9YDR179C 489 nt1.31□□□□□ -2.2
SKO1Q02100 tW(UCA)QtW(UCA)Q 74 nt1.31□□□□□ -2.2
SKO1Q02100 YPR002C-AYPR002C-A 198 nt1.31□□□□□ -2.2
SKO1Q02100 SWI4YER111C 3282 nt1.3□□□□□ -2.2
SKO1Q02100 RIM20YOR275C 1986 nt1.3□□□□□ -2.2
SKO1Q02100 MPT5YGL178W 2580 nt1.3□□□□□ -2.2
SKO1Q02100 YOR029WYOR029W 336 nt1.3□□□□□ -2.2
SKO1Q02100 BIL1YOR304C-A 231 nt1.3□□□□□ -2.2
SKO1Q02100 SLI15YBR156C 2097 nt1.3□□□□□ -2.2
SKO1Q02100 PIP2YOR363C 2991 nt1.29□□□□□ -2.2
SKO1Q02100 CAT8YMR280C 4302 nt1.29□□□□□ -2.2
SKO1Q02100 YDR426CYDR426C 378 nt1.29□□□□□ -2.2
SKO1Q02100 YIL102CYIL102C 306 nt1.29□□□□□ -2.2
SKO1Q02100 YMR290W-AYMR290W-A 348 nt1.29□□□□□ -2.2
SKO1Q02100 YBR012CYBR012C 420 nt1.29□□□□□ -2.2
SKO1Q02100 LCD1YDR499W 2244 nt1.28□□□□□ -2.2
SKO1Q02100 FYV8YGR196C 2454 nt1.28□□□□□ -2.2
SKO1Q02100 HMRA1YCR097W 381 nt1.28□□□□□ -2.2
SKO1Q02100 PFD1YJL179W 330 nt1.28□□□□□ -2.2
SKO1Q02100 PCC1YKR095W-A 267 nt1.28□□□□□ -2.2
SKO1Q02100 RAD34YDR314C 2079 nt1.28□□□□□ -2.2
SKO1Q02100 COG4YPR105C 2586 nt1.28□□□□□ -2.2
SKO1Q02100 YLL020CYLL020C 306 nt1.27□□□□□ -2.21
SKO1Q02100 RRT15YLR162W-A 189 nt1.27□□□□□ -2.21
SKO1Q02100 YPR063CYPR063C 423 nt1.27□□□□□ -2.21
SKO1Q02100 ALY2YJL084C 3141 nt1.27□□□□□ -2.21
SKO1Q02100 NIP100YPL174C 2607 nt1.27□□□□□ -2.21
SKO1Q02100 AIM44YPL158C 2277 nt1.26□□□□□ -2.21
SKO1Q02100 APL3YBL037W 3078 nt1.26□□□□□ -2.21
SKO1Q02100 RSM22YKL155C 1887 nt1.25□□□□□ -2.21
SKO1Q02100 YHL046W-AYHL046W-A 327 nt1.25□□□□□ -2.21
SKO1Q02100 YPR016W-AYPR016W-A 261 nt1.25□□□□□ -2.21
SKO1Q02100 SPC98YNL126W 2541 nt1.25□□□□□ -2.21
SKO1Q02100 SLD3YGL113W 2007 nt1.24□□□□□ -2.21
SKO1Q02100 MAM33YIL070C 801 nt1.24□□□□□ -2.21
SKO1Q02100 SET3YKR029C 2256 nt1.23□□□□□ -2.21
SKO1Q02100 RPL35AYDL191W 363 nt1.23□□□□□ -2.21
SKO1Q02100 YBR221W-AYBR221W-A 105 nt1.23□□□□□ -2.21
SKO1Q02100 SEC3YER008C 4011 nt1.23□□□□□ -2.21
SKO1Q02100 FIG4YNL325C 2640 nt1.23□□□□□ -2.21
SKO1Q02100 MMS4YBR098W 2076 nt1.22□□□□□ -2.21
SKO1Q02100 snR56snR56 88 nt1.22□□□□□ -2.21
SKO1Q02100 YBL008W-AYBL008W-A 240 nt1.22□□□□□ -2.21
SKO1Q02100 YPR197CYPR197C 564 nt1.22□□□□□ -2.21
SKO1Q02100 EAF1YDR359C 2949 nt1.22□□□□□ -2.21
SKO1Q02100 NUP145YGL092W 3954 nt1.22□□□□□ -2.21
SKO1Q02100 IFH1YLR223C 3258 nt1.21□□□□□ -2.22
SKO1Q02100 GIM4YEL003W 336 nt1.21□□□□□ -2.22
SKO1Q02100 YIR044CYIR044C 186 nt1.21□□□□□ -2.22
SKO1Q02100 PKH2YOL100W 3246 nt1.21□□□□□ -2.22
SKO1Q02100 AHC1YOR023C 1701 nt1.2□□□□□ -2.22
SKO1Q02100 CDC25YLR310C 4770 nt1.2□□□□□ -2.22
SKO1Q02100 STO1YMR125W 2586 nt1.2□□□□□ -2.22
SKO1Q02100 CDC39YCR093W 6327 nt1.2□□□□□ -2.22
SKO1Q02100 YJR029WYJR029W 5268 nt1.2□□□□□ -2.22
SKO1Q02100 YPR137C-BYPR137C-B 5268 nt1.2□□□□□ -2.22
SKO1Q02100 STB6YKL072W 2301 nt1.2□□□□□ -2.22
SKO1Q02100 CDC36YDL165W 576 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 192 ms