Protein–RNA interactions for Protein: P45978

SCD6, Protein SCD6, yeastyeast

Known RBP RIP-Chip data

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCD6P45978 HIR3YJR140C 4947 nt1.65□□□□□ -2.14 RIP-Chip
SCD6P45978 YLL032CYLL032C 2478 nt1.65□□□□□ -2.14
SCD6P45978 HTL1YCR020W-B 237 nt1.65□□□□□ -2.15
SCD6P45978 TRX1YLR043C 312 nt1.65□□□□□ -2.15
SCD6P45978 YAR029WYAR029W 225 nt1.65□□□□□ -2.15 RIP-Chip
SCD6P45978 RLM1YPL089C 2031 nt1.65□□□□□ -2.15
SCD6P45978 SEC63YOR254C 1992 nt1.65□□□□□ -2.15 RIP-Chip
SCD6P45978 SEY1YOR165W 2331 nt1.65□□□□□ -2.15 RIP-Chip
SCD6P45978 SRP14YDL092W 441 nt1.64□□□□□ -2.15
SCD6P45978 PKH3YDR466W 2697 nt1.64□□□□□ -2.15 RIP-Chip
SCD6P45978 DBP6YNR038W 1890 nt1.63□□□□□ -2.15 RIP-Chip
SCD6P45978 YJL135WYJL135W 318 nt1.63□□□□□ -2.15
SCD6P45978 YLR422WYLR422W 5799 nt1.63□□□□□ -2.15 RIP-Chip
SCD6P45978 CTF4YPR135W 2784 nt1.63□□□□□ -2.15 RIP-Chip
SCD6P45978 MLH3YPL164C 2148 nt1.63□□□□□ -2.15 RIP-Chip
SCD6P45978 MON2YNL297C 4911 nt1.62□□□□□ -2.15
SCD6P45978 snR72snR72 98 nt1.62□□□□□ -2.15
SCD6P45978 YHR210CYHR210C 1026 nt1.62□□□□□ -2.15
SCD6P45978 PFD1YJL179W 330 nt1.62□□□□□ -2.15
SCD6P45978 YPR010C-AYPR010C-A 219 nt1.62□□□□□ -2.15
SCD6P45978 YMR290W-AYMR290W-A 348 nt1.61□□□□□ -2.15
SCD6P45978 SAS3YBL052C 2496 nt1.61□□□□□ -2.15 RIP-Chip
SCD6P45978 YLR035C-AYLR035C-A 3468 nt1.61□□□□□ -2.15
SCD6P45978 PAU3YCR104W 375 nt1.6□□□□□ -2.15 RIP-Chip
SCD6P45978 tT(UGU)HtT(UGU)H 72 nt1.6□□□□□ -2.15
SCD6P45978 MDM20YOL076W 2391 nt1.6□□□□□ -2.15 RIP-Chip
SCD6P45978 TDA9YML081W 3756 nt1.59□□□□□ -2.15
SCD6P45978 RPL31AYDL075W 342 nt1.59□□□□□ -2.15
SCD6P45978 TBS1YBR150C 3285 nt1.58□□□□□ -2.16 RIP-Chip
SCD6P45978 DGR2YKL121W 2559 nt1.58□□□□□ -2.16
SCD6P45978 SSK2YNR031C 4740 nt1.58□□□□□ -2.16 RIP-Chip
SCD6P45978 PMD1YER132C 5262 nt1.58□□□□□ -2.16 RIP-Chip
SCD6P45978 YCR022CYCR022C 345 nt1.58□□□□□ -2.16
SCD6P45978 YIL032CYIL032C 357 nt1.58□□□□□ -2.16
SCD6P45978 YPR063CYPR063C 423 nt1.58□□□□□ -2.16
SCD6P45978 ENV11YGR071C 2583 nt1.57□□□□□ -2.16 RIP-Chip
SCD6P45978 SDH2YLL041C 801 nt1.57□□□□□ -2.16
SCD6P45978 YMR242W-AYMR242W-A 90 nt1.57□□□□□ -2.16
SCD6P45978 YOL160WYOL160W 342 nt1.57□□□□□ -2.16
SCD6P45978 ZIP2YGL249W 2115 nt1.57□□□□□ -2.16
SCD6P45978 YDR344CYDR344C 444 nt1.56□□□□□ -2.16
SCD6P45978 YOR108C-AYOR108C-A 210 nt1.56□□□□□ -2.16
SCD6P45978 YLR419WYLR419W 4308 nt1.56□□□□□ -2.16 RIP-Chip
SCD6P45978 APL2YKL135C 2181 nt1.56□□□□□ -2.16
SCD6P45978 PIG1YLR273C 1947 nt1.56□□□□□ -2.16 RIP-Chip
SCD6P45978 LRE1YCL051W 1752 nt1.55□□□□□ -2.16 RIP-Chip
SCD6P45978 MSH3YCR092C 3057 nt1.55□□□□□ -2.16
SCD6P45978 YDR182W-AYDR182W-A 204 nt1.55□□□□□ -2.16
SCD6P45978 YHL042WYHL042W 453 nt1.55□□□□□ -2.16
SCD6P45978 YOR282WYOR282W 321 nt1.55□□□□□ -2.16
SCD6P45978 UTP21YLR409C 2820 nt1.55□□□□□ -2.16 RIP-Chip
SCD6P45978 OST1YJL002C 1431 nt1.55□□□□□ -2.16
SCD6P45978 NIP100YPL174C 2607 nt1.54□□□□□ -2.16 RIP-Chip
SCD6P45978 LHS1YKL073W 2646 nt1.53□□□□□ -2.16
SCD6P45978 snR60snR60 104 nt1.53□□□□□ -2.16
SCD6P45978 YDL211CYDL211C 1119 nt1.53□□□□□ -2.16 RIP-Chip
SCD6P45978 SAC3YDR159W 3906 nt1.53□□□□□ -2.16 RIP-Chip
SCD6P45978 AI5_ALPHAQ0070 1893 nt1.53□□□□□ -2.16
SCD6P45978 PAU2YEL049W 363 nt1.53□□□□□ -2.16 RIP-Chip
SCD6P45978 SXM1YDR395W 2835 nt1.53□□□□□ -2.17 RIP-Chip
SCD6P45978 ALG13YGL047W 609 nt1.52□□□□□ -2.17
SCD6P45978 YGR069WYGR069W 336 nt1.52□□□□□ -2.17
SCD6P45978 YMR230W-AYMR230W-A 189 nt1.52□□□□□ -2.17
SCD6P45978 MAD1YGL086W 2250 nt1.52□□□□□ -2.17 RIP-Chip
SCD6P45978 COG8YML071C 1824 nt1.52□□□□□ -2.17 RIP-Chip
SCD6P45978 SPC98YNL126W 2541 nt1.51□□□□□ -2.17
SCD6P45978 SPT21YMR179W 2277 nt1.51□□□□□ -2.17 RIP-Chip
SCD6P45978 LCD1YDR499W 2244 nt1.51□□□□□ -2.17 RIP-Chip
SCD6P45978 SSS1YDR086C 243 nt1.51□□□□□ -2.17 RIP-Chip
SCD6P45978 CCH1YGR217W 6120 nt1.51□□□□□ -2.17 RIP-Chip
SCD6P45978 RAD34YDR314C 2079 nt1.51□□□□□ -2.17
SCD6P45978 YOR019WYOR019W 2193 nt1.5□□□□□ -2.17
SCD6P45978 HMRA2YCR096C 360 nt1.5□□□□□ -2.17
SCD6P45978 SCW11YGL028C 1629 nt1.5□□□□□ -2.17
SCD6P45978 YGR109W-BYGR109W-B 4644 nt1.5□□□□□ -2.17
SCD6P45978 RAD61YDR014W 1944 nt1.5□□□□□ -2.17
SCD6P45978 MPT5YGL178W 2580 nt1.49□□□□□ -2.17
SCD6P45978 YHR063W-AYHR063W-A 336 nt1.49□□□□□ -2.17
SCD6P45978 HUG1YML058W-A 207 nt1.49□□□□□ -2.17
SCD6P45978 YMR175W-AYMR175W-A 195 nt1.49□□□□□ -2.17
SCD6P45978 SPO24YPR036W-A 204 nt1.49□□□□□ -2.17
SCD6P45978 KCS1YDR017C 3153 nt1.49□□□□□ -2.17 RIP-Chip
SCD6P45978 SEC5YDR166C 2916 nt1.49□□□□□ -2.17 RIP-Chip
SCD6P45978 YCK3YER123W 1575 nt1.48□□□□□ -2.17 RIP-Chip
SCD6P45978 YJL015CYJL015C 285 nt1.48□□□□□ -2.17
SCD6P45978 YMR247W-AYMR247W-A 144 nt1.48□□□□□ -2.17
SCD6P45978 YOR008C-AYOR008C-A 225 nt1.48□□□□□ -2.17
SCD6P45978 YPL152W-AYPL152W-A 99 nt1.48□□□□□ -2.17
SCD6P45978 SKI3YPR189W 4299 nt1.48□□□□□ -2.17
SCD6P45978 NOC3YLR002C 1992 nt1.47□□□□□ -2.17
SCD6P45978 RPL34BYIL052C 366 nt1.47□□□□□ -2.17
SCD6P45978 VIK1YPL253C 1944 nt1.46□□□□□ -2.18 RIP-Chip
SCD6P45978 tH(GUG)E1tH(GUG)E1 72 nt1.46□□□□□ -2.18
SCD6P45978 tH(GUG)E2tH(GUG)E2 72 nt1.46□□□□□ -2.18
SCD6P45978 tH(GUG)G1tH(GUG)G1 72 nt1.46□□□□□ -2.18
SCD6P45978 tH(GUG)G2tH(GUG)G2 72 nt1.46□□□□□ -2.18
SCD6P45978 tH(GUG)HtH(GUG)H 72 nt1.46□□□□□ -2.18
SCD6P45978 tH(GUG)KtH(GUG)K 72 nt1.46□□□□□ -2.18
SCD6P45978 tH(GUG)MtH(GUG)M 72 nt1.46□□□□□ -2.18
SCD6P45978 STF2YGR008C 255 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 56 ms