Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 MAK10YEL053C 2202 nt1.6□□□□□ -2.15
SHO1P40073 CTR9YOL145C 3234 nt1.6□□□□□ -2.15
SHO1P40073 YDR366CYDR366C 399 nt1.6□□□□□ -2.15
SHO1P40073 YPL152W-AYPL152W-A 99 nt1.6□□□□□ -2.15
SHO1P40073 DCP2YNL118C 2913 nt1.6□□□□□ -2.15
SHO1P40073 SEC63YOR254C 1992 nt1.59□□□□□ -2.15
SHO1P40073 RLM1YPL089C 2031 nt1.59□□□□□ -2.15
SHO1P40073 YGR069WYGR069W 336 nt1.59□□□□□ -2.15
SHO1P40073 YHR063W-AYHR063W-A 336 nt1.59□□□□□ -2.15
SHO1P40073 ENV11YGR071C 2583 nt1.59□□□□□ -2.15
SHO1P40073 MYO2YOR326W 4725 nt1.59□□□□□ -2.16
SHO1P40073 IRC20YLR247C 4671 nt1.58□□□□□ -2.16
SHO1P40073 HMRA2YCR096C 360 nt1.58□□□□□ -2.16
SHO1P40073 snR8snR8 190 nt1.58□□□□□ -2.16
SHO1P40073 YHL042WYHL042W 453 nt1.58□□□□□ -2.16
SHO1P40073 NIP100YPL174C 2607 nt1.57□□□□□ -2.16
SHO1P40073 PAU3YCR104W 375 nt1.57□□□□□ -2.16
SHO1P40073 RAD61YDR014W 1944 nt1.57□□□□□ -2.16
SHO1P40073 IRE1YHR079C 3348 nt1.57□□□□□ -2.16
SHO1P40073 MON2YNL297C 4911 nt1.57□□□□□ -2.16
SHO1P40073 YLR035C-AYLR035C-A 3468 nt1.56□□□□□ -2.16
SHO1P40073 snR60snR60 104 nt1.56□□□□□ -2.16
SHO1P40073 SSS1YDR086C 243 nt1.56□□□□□ -2.16
SHO1P40073 YOL160WYOL160W 342 nt1.56□□□□□ -2.16
SHO1P40073 MLH3YPL164C 2148 nt1.56□□□□□ -2.16
SHO1P40073 COG8YML071C 1824 nt1.56□□□□□ -2.16
SHO1P40073 SEY1YOR165W 2331 nt1.56□□□□□ -2.16
SHO1P40073 MPT5YGL178W 2580 nt1.55□□□□□ -2.16
SHO1P40073 SPC98YNL126W 2541 nt1.55□□□□□ -2.16
SHO1P40073 RPL31AYDL075W 342 nt1.55□□□□□ -2.16
SHO1P40073 YDR182W-AYDR182W-A 204 nt1.55□□□□□ -2.16
SHO1P40073 YJL015CYJL015C 285 nt1.55□□□□□ -2.16
SHO1P40073 SDH2YLL041C 801 nt1.55□□□□□ -2.16
SHO1P40073 PKH3YDR466W 2697 nt1.55□□□□□ -2.16
SHO1P40073 HMI1YOL095C 2121 nt1.55□□□□□ -2.16
SHO1P40073 OST1YJL002C 1431 nt1.55□□□□□ -2.16
SHO1P40073 SCW11YGL028C 1629 nt1.55□□□□□ -2.16
SHO1P40073 BRR2YER172C 6492 nt1.54□□□□□ -2.16
SHO1P40073 APL2YKL135C 2181 nt1.54□□□□□ -2.16
SHO1P40073 SAS3YBL052C 2496 nt1.54□□□□□ -2.16
SHO1P40073 YEL020C-BYEL020C-B 198 nt1.54□□□□□ -2.16
SHO1P40073 YMR242W-AYMR242W-A 90 nt1.54□□□□□ -2.16
SHO1P40073 TDA9YML081W 3756 nt1.54□□□□□ -2.16
SHO1P40073 LCD1YDR499W 2244 nt1.53□□□□□ -2.16
SHO1P40073 ZIP2YGL249W 2115 nt1.53□□□□□ -2.16
SHO1P40073 PIG1YLR273C 1947 nt1.53□□□□□ -2.16
SHO1P40073 YLR419WYLR419W 4308 nt1.53□□□□□ -2.16
SHO1P40073 DGR2YKL121W 2559 nt1.53□□□□□ -2.17
SHO1P40073 YDL211CYDL211C 1119 nt1.52□□□□□ -2.17
SHO1P40073 INA22YIR024C 651 nt1.52□□□□□ -2.17
SHO1P40073 YMR158W-BYMR158W-B 321 nt1.52□□□□□ -2.17
SHO1P40073 YOR008C-AYOR008C-A 225 nt1.52□□□□□ -2.17
SHO1P40073 SPT21YMR179W 2277 nt1.52□□□□□ -2.17
SHO1P40073 FRK1YPL141C 2598 nt1.52□□□□□ -2.17
SHO1P40073 RTP1YMR185W 2946 nt1.51□□□□□ -2.17
SHO1P40073 TBS1YBR150C 3285 nt1.51□□□□□ -2.17
SHO1P40073 PAU2YEL049W 363 nt1.5□□□□□ -2.17
SHO1P40073 YOR108C-AYOR108C-A 210 nt1.5□□□□□ -2.17
SHO1P40073 MAD1YGL086W 2250 nt1.5□□□□□ -2.17
SHO1P40073 RAD34YDR314C 2079 nt1.49□□□□□ -2.17
SHO1P40073 SAC3YDR159W 3906 nt1.49□□□□□ -2.17
SHO1P40073 VIK1YPL253C 1944 nt1.49□□□□□ -2.17
SHO1P40073 YCK3YER123W 1575 nt1.49□□□□□ -2.17
SHO1P40073 AI5_ALPHAQ0070 1893 nt1.49□□□□□ -2.17
SHO1P40073 SFB2YNL049C 2631 nt1.48□□□□□ -2.17
SHO1P40073 CSE2YNR010W 450 nt1.48□□□□□ -2.17
SHO1P40073 UTP21YLR409C 2820 nt1.48□□□□□ -2.17
SHO1P40073 COA6YMR244C-A 315 nt1.47□□□□□ -2.17
SHO1P40073 YNL028WYNL028W 318 nt1.47□□□□□ -2.17
SHO1P40073 YOR015WYOR015W 360 nt1.47□□□□□ -2.17
SHO1P40073 snR49snR49 165 nt1.47□□□□□ -2.17
SHO1P40073 SPO75YLL005C 2607 nt1.47□□□□□ -2.17
SHO1P40073 CFT1YDR301W 4074 nt1.46□□□□□ -2.18
SHO1P40073 YGL188C-AYGL188C-A 141 nt1.46□□□□□ -2.18
SHO1P40073 RPL34BYIL052C 366 nt1.46□□□□□ -2.18
SHO1P40073 YMR175W-AYMR175W-A 195 nt1.46□□□□□ -2.18
SHO1P40073 YBR064WYBR064W 429 nt1.46□□□□□ -2.18
SHO1P40073 SKI3YPR189W 4299 nt1.46□□□□□ -2.18
SHO1P40073 NOC3YLR002C 1992 nt1.45□□□□□ -2.18
SHO1P40073 YLR120W-AYLR120W-A 102 nt1.45□□□□□ -2.18
SHO1P40073 YMR230W-AYMR230W-A 189 nt1.45□□□□□ -2.18
SHO1P40073 YOR019WYOR019W 2193 nt1.44□□□□□ -2.18
SHO1P40073 snR80snR80 171 nt1.44□□□□□ -2.18
SHO1P40073 YBL008W-AYBL008W-A 240 nt1.44□□□□□ -2.18
SHO1P40073 YMR172C-AYMR172C-A 384 nt1.44□□□□□ -2.18
SHO1P40073 TRM3YDL112W 4311 nt1.44□□□□□ -2.18
SHO1P40073 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
SHO1P40073 VPS54YDR027C 2670 nt1.43□□□□□ -2.18
SHO1P40073 YGL041CYGL041C 204 nt1.43□□□□□ -2.18
SHO1P40073 YJL197C-AYJL197C-A 282 nt1.43□□□□□ -2.18
SHO1P40073 SPO24YPR036W-A 204 nt1.43□□□□□ -2.18
SHO1P40073 PDE2YOR360C 1581 nt1.42□□□□□ -2.18
SHO1P40073 CTF4YPR135W 2784 nt1.42□□□□□ -2.18
SHO1P40073 KCS1YDR017C 3153 nt1.42□□□□□ -2.18
SHO1P40073 YGL052WYGL052W 306 nt1.42□□□□□ -2.18
SHO1P40073 EMC5YIL027C 426 nt1.42□□□□□ -2.18
SHO1P40073 YMR321CYMR321C 318 nt1.42□□□□□ -2.18
SHO1P40073 SPO21YOL091W 1830 nt1.41□□□□□ -2.18
SHO1P40073 KIP1YBL063W 3336 nt1.41□□□□□ -2.18
SHO1P40073 RPS27BYHR021C 249 nt1.41□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 154.9 ms