Protein–RNA interactions for Protein: P38244

PFF1, Vacuolar membrane protease, yeastyeast

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFF1P38244 RTR1YER139C 681 nt1.49□□□□□ -2.17
PFF1P38244 YJR003CYJR003C 1560 nt1.49□□□□□ -2.17
PFF1P38244 SWI6YLR182W 2412 nt1.49□□□□□ -2.17
PFF1P38244 YCS4YLR272C 3531 nt1.49□□□□□ -2.17
PFF1P38244 FYV8YGR196C 2454 nt1.48□□□□□ -2.17
PFF1P38244 tW(UCA)QtW(UCA)Q 74 nt1.48□□□□□ -2.17
PFF1P38244 YLR419WYLR419W 4308 nt1.48□□□□□ -2.17
PFF1P38244 MLH3YPL164C 2148 nt1.48□□□□□ -2.17
PFF1P38244 RPS27AYKL156W 249 nt1.47□□□□□ -2.17
PFF1P38244 YAR053WYAR053W 297 nt1.47□□□□□ -2.17
PFF1P38244 IRC23YOR044W 474 nt1.47□□□□□ -2.17
PFF1P38244 FIG4YNL325C 2640 nt1.47□□□□□ -2.17
PFF1P38244 DGR2YKL121W 2559 nt1.46□□□□□ -2.18
PFF1P38244 YPL225WYPL225W 441 nt1.46□□□□□ -2.18
PFF1P38244 YOP1YPR028W 543 nt1.46□□□□□ -2.18
PFF1P38244 KAP122YGL016W 3246 nt1.46□□□□□ -2.18
PFF1P38244 AIM9YER080W 1884 nt1.46□□□□□ -2.18
PFF1P38244 LYS14YDR034C 2373 nt1.45□□□□□ -2.18
PFF1P38244 ALK1YGL021W 2283 nt1.45□□□□□ -2.18
PFF1P38244 YAL063C-AYAL063C-A 291 nt1.45□□□□□ -2.18
PFF1P38244 COF1YLL050C 432 nt1.45□□□□□ -2.18
PFF1P38244 UTP20YBL004W 7482 nt1.45□□□□□ -2.18
PFF1P38244 YDR003W-AYDR003W-A 123 nt1.44□□□□□ -2.18
PFF1P38244 tF(GAA)BtF(GAA)B 73 nt1.44□□□□□ -2.18
PFF1P38244 tF(GAA)FtF(GAA)F 73 nt1.44□□□□□ -2.18
PFF1P38244 tF(GAA)GtF(GAA)G 73 nt1.44□□□□□ -2.18
PFF1P38244 tF(GAA)H1tF(GAA)H1 73 nt1.44□□□□□ -2.18
PFF1P38244 tF(GAA)H2tF(GAA)H2 73 nt1.44□□□□□ -2.18
PFF1P38244 tF(GAA)MtF(GAA)M 73 nt1.44□□□□□ -2.18
PFF1P38244 tF(GAA)P1tF(GAA)P1 73 nt1.44□□□□□ -2.18
PFF1P38244 tF(GAA)P2tF(GAA)P2 73 nt1.44□□□□□ -2.18
PFF1P38244 YGR174W-AYGR174W-A 87 nt1.44□□□□□ -2.18
PFF1P38244 YJL022WYJL022W 309 nt1.44□□□□□ -2.18
PFF1P38244 VPS55YJR044C 423 nt1.44□□□□□ -2.18
PFF1P38244 MRPL31YKL138C 396 nt1.44□□□□□ -2.18
PFF1P38244 PXA2YKL188C 2562 nt1.43□□□□□ -2.18
PFF1P38244 YDL240C-AYDL240C-A 138 nt1.43□□□□□ -2.18
PFF1P38244 YHL041WYHL041W 450 nt1.43□□□□□ -2.18
PFF1P38244 YAF9YNL107W 681 nt1.43□□□□□ -2.18
PFF1P38244 YPL229WYPL229W 621 nt1.43□□□□□ -2.18
PFF1P38244 UFD2YDL190C 2886 nt1.43□□□□□ -2.18
PFF1P38244 YIL059CYIL059C 366 nt1.42□□□□□ -2.18
PFF1P38244 RPL40BYKR094C 387 nt1.42□□□□□ -2.18
PFF1P38244 YOR072W-AYOR072W-A 249 nt1.42□□□□□ -2.18
PFF1P38244 TIM18YOR297C 579 nt1.42□□□□□ -2.18
PFF1P38244 BIL1YOR304C-A 231 nt1.42□□□□□ -2.18
PFF1P38244 MAD1YGL086W 2250 nt1.41□□□□□ -2.18
PFF1P38244 MSN5YDR335W 3675 nt1.41□□□□□ -2.18
PFF1P38244 YLR140WYLR140W 327 nt1.41□□□□□ -2.18
PFF1P38244 YMR141W-AYMR141W-A 225 nt1.41□□□□□ -2.18
PFF1P38244 YOR376WYOR376W 369 nt1.41□□□□□ -2.18
PFF1P38244 EST2YLR318W 2655 nt1.41□□□□□ -2.18
PFF1P38244 MVP1YMR004W 1536 nt1.4□□□□□ -2.18
PFF1P38244 SLY1YDR189W 2001 nt1.4□□□□□ -2.18
PFF1P38244 CSN9YDR179C 489 nt1.4□□□□□ -2.19
PFF1P38244 SEC5YDR166C 2916 nt1.4□□□□□ -2.19
PFF1P38244 PIG1YLR273C 1947 nt1.4□□□□□ -2.19
PFF1P38244 AHC1YOR023C 1701 nt1.4□□□□□ -2.19
PFF1P38244 RFX1YLR176C 2436 nt1.39□□□□□ -2.19
PFF1P38244 SPC110YDR356W 2835 nt1.39□□□□□ -2.19
PFF1P38244 CYC7YEL039C 342 nt1.39□□□□□ -2.19
PFF1P38244 YPL038W-AYPL038W-A 192 nt1.39□□□□□ -2.19
PFF1P38244 EFR3YMR212C 2349 nt1.39□□□□□ -2.19
PFF1P38244 SGO1YOR073W 1773 nt1.39□□□□□ -2.19
PFF1P38244 YGR109W-BYGR109W-B 4644 nt1.38□□□□□ -2.19
PFF1P38244 UPS1YLR193C 528 nt1.38□□□□□ -2.19
PFF1P38244 YOR161W-BYOR161W-B 261 nt1.38□□□□□ -2.19
PFF1P38244 NUP145YGL092W 3954 nt1.38□□□□□ -2.19
PFF1P38244 NUT1YGL151W 3399 nt1.38□□□□□ -2.19
PFF1P38244 YLL054CYLL054C 2532 nt1.37□□□□□ -2.19
PFF1P38244 SMC4YLR086W 4257 nt1.37□□□□□ -2.19
PFF1P38244 SRP14YDL092W 441 nt1.37□□□□□ -2.19
PFF1P38244 YDR102CYDR102C 333 nt1.37□□□□□ -2.19
PFF1P38244 RAD50YNL250W 3939 nt1.36□□□□□ -2.19
PFF1P38244 NHP2YDL208W 471 nt1.36□□□□□ -2.19
PFF1P38244 YJR011CYJR011C 786 nt1.36□□□□□ -2.19
PFF1P38244 SAS3YBL052C 2496 nt1.36□□□□□ -2.19
PFF1P38244 RPL33BYOR234C 324 nt1.36□□□□□ -2.19
PFF1P38244 YPR117WYPR117W 7470 nt1.36□□□□□ -2.19
PFF1P38244 NOC3YLR002C 1992 nt1.36□□□□□ -2.19
PFF1P38244 YLL032CYLL032C 2478 nt1.35□□□□□ -2.19
PFF1P38244 RPL35AYDL191W 363 nt1.35□□□□□ -2.19
PFF1P38244 YGL217CYGL217C 342 nt1.35□□□□□ -2.19
PFF1P38244 PAM16YJL104W 450 nt1.35□□□□□ -2.19
PFF1P38244 NUT2YPR168W 474 nt1.35□□□□□ -2.19
PFF1P38244 AZF1YOR113W 2745 nt1.35□□□□□ -2.19
PFF1P38244 ENV11YGR071C 2583 nt1.34□□□□□ -2.19
PFF1P38244 YKL118WYKL118W 312 nt1.34□□□□□ -2.19
PFF1P38244 YKL136WYKL136W 399 nt1.34□□□□□ -2.19
PFF1P38244 YSY6YBR162W-A 198 nt1.34□□□□□ -2.19
PFF1P38244 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
PFF1P38244 MUK1YPL070W 1839 nt1.33□□□□□ -2.2
PFF1P38244 YNL284C-BYNL284C-B 5268 nt1.32□□□□□ -2.2
PFF1P38244 SLX4YLR135W 2247 nt1.32□□□□□ -2.2
PFF1P38244 YDR413CYDR413C 576 nt1.32□□□□□ -2.2
PFF1P38244 YHR007C-AYHR007C-A 216 nt1.32□□□□□ -2.2
PFF1P38244 YJL135WYJL135W 318 nt1.32□□□□□ -2.2
PFF1P38244 snR36snR36 182 nt1.32□□□□□ -2.2
PFF1P38244 snR51snR51 107 nt1.32□□□□□ -2.2
PFF1P38244 SEC21YNL287W 2808 nt1.31□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 50.2 ms