Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 KIF22-210ENST00000570173 562 ntTSL 513.35□□□□□ -0.274e-7■□□□□ 8.4
XRCC6P12956 NSD2-220ENST00000509115 1212 ntTSL 213.29□□□□□ -0.284e-7■□□□□ 8.4
XRCC6P12956 NSD2-222ENST00000512700 1095 ntTSL 513.29□□□□□ -0.284e-7■□□□□ 8.4
XRCC6P12956 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.324e-7■□□□□ 8.4
XRCC6P12956 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.374e-7■□□□□ 8.4
XRCC6P12956 NSD2-202ENST00000353275 7980 ntTSL 1 (best)12.44□□□□□ -0.424e-7■□□□□ 8.4
XRCC6P12956 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.494e-7■□□□□ 8.4
XRCC6P12956 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.54e-7■□□□□ 8.4
XRCC6P12956 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC11.35□□□□□ -0.594e-7■□□□□ 8.4
XRCC6P12956 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC11.31□□□□□ -0.64e-7■□□□□ 8.4
XRCC6P12956 NSD2-201ENST00000312087 8050 ntTSL 1 (best)11.25□□□□□ -0.614e-7■□□□□ 8.4
XRCC6P12956 DDB1-203ENST00000451943 1224 ntTSL 210.16□□□□□ -0.784e-7■□□□□ 8.4
XRCC6P12956 RBBP6-207ENST00000564314 3361 ntTSL 29.94□□□□□ -0.824e-7■□□□□ 8.4
XRCC6P12956 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC9.2□□□□□ -0.944e-7■□□□□ 8.4
XRCC6P12956 NRDC-203ENST00000440943 1660 ntTSL 58.81□□□□□ -14e-7■□□□□ 8.4
XRCC6P12956 NRDC-210ENST00000485608 3149 ntTSL 28.43□□□□□ -1.064e-7■□□□□ 8.4
XRCC6P12956 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.184e-7■□□□□ 8.4
XRCC6P12956 RANBP1-212ENST00000467920 529 ntTSL 26.29□□□□□ -1.43e-10■□□□□ 8.4
XRCC6P12956 RBBP6-209ENST00000567686 1138 ntTSL 55.88□□□□□ -1.474e-7■□□□□ 8.4
XRCC6P12956 NASP-210ENST00000481782 3659 ntTSL 29.59□□□□□ -0.875e-14■□□□□ 8.4
XRCC6P12956 NASP-218ENST00000530073 2740 ntTSL 29.26□□□□□ -0.935e-14■□□□□ 8.4
XRCC6P12956 NASP-221ENST00000531612 938 ntAPPRIS ALT2 TSL 59.22□□□□□ -0.935e-14■□□□□ 8.4
XRCC6P12956 NASP-223ENST00000534450 632 ntTSL 28.49□□□□□ -1.055e-14■□□□□ 8.4
XRCC6P12956 CALCOCO1-203ENST00000546443 1523 ntTSL 1 (best)17.88■□□□□ 0.457e-6■□□□□ 8.4
XRCC6P12956 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC14.35□□□□□ -0.117e-6■□□□□ 8.4
XRCC6P12956 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.277e-6■□□□□ 8.4
XRCC6P12956 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.377e-6■□□□□ 8.4
XRCC6P12956 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC11.73□□□□□ -0.537e-6■□□□□ 8.4
XRCC6P12956 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.587e-6■□□□□ 8.4
XRCC6P12956 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.85■□□□□ 0.778e-12■□□□□ 8.4
XRCC6P12956 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC9.94□□□□□ -0.826e-10■□□□□ 8.3
XRCC6P12956 PPP2R5C-215ENST00000556068 3363 ntTSL 28.46□□□□□ -1.066e-10■□□□□ 8.3
XRCC6P12956 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.952e-10■□□□□ 8.3
XRCC6P12956 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.06■■□□□ 1.67e-11■□□□□ 8.3
XRCC6P12956 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.07■■□□□ 1.127e-11■□□□□ 8.3
XRCC6P12956 EGFL7-206ENST00000492002 654 ntTSL 525.67■■□□□ 1.72e-15■□□□□ 8.3
XRCC6P12956 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.422e-15■□□□□ 8.3
XRCC6P12956 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.372e-15■□□□□ 8.3
XRCC6P12956 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.182e-15■□□□□ 8.3
XRCC6P12956 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.92e-15■□□□□ 8.3
XRCC6P12956 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.352e-6■□□□□ 8.3
XRCC6P12956 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.272e-6■□□□□ 8.3
XRCC6P12956 E4F1-202ENST00000562589 817 ntTSL 528.05■■■□□ 2.082e-6■□□□□ 8.3
XRCC6P12956 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.042e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-219ENST00000584137 529 ntTSL 424.82■■□□□ 1.562e-6■□□□□ 8.3
XRCC6P12956 SYMPK-209ENST00000598155 1603 ntTSL 522.3■■□□□ 1.162e-6■□□□□ 8.3
XRCC6P12956 E4F1-207ENST00000565413 940 ntTSL 321.95■■□□□ 1.12e-6■□□□□ 8.3
XRCC6P12956 KIF2A-207ENST00000509663 759 ntTSL 321.8■■□□□ 1.082e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-216ENST00000583060 477 ntTSL 321.54■■□□□ 1.042e-6■□□□□ 8.3
XRCC6P12956 RNF44-207ENST00000513029 1647 ntTSL 220.14■□□□□ 0.812e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.672e-6■□□□□ 8.3
XRCC6P12956 RNF44-202ENST00000504160 887 ntTSL 319.07■□□□□ 0.642e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.95■□□□□ 0.622e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-223ENST00000585299 537 ntTSL 418.76■□□□□ 0.592e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-207ENST00000579481 564 ntTSL 218.14■□□□□ 0.492e-6■□□□□ 8.3
XRCC6P12956 MATR3-213ENST00000508689 561 ntTSL 418.12■□□□□ 0.492e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-215ENST00000582574 556 ntTSL 318.09■□□□□ 0.492e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-221ENST00000585062 556 ntTSL 417.81■□□□□ 0.442e-6■□□□□ 8.3
XRCC6P12956 SYMPK-202ENST00000593504 5107 ntTSL 217.65■□□□□ 0.422e-6■□□□□ 8.3
XRCC6P12956 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.42e-6■□□□□ 8.3
XRCC6P12956 SYMPK-215ENST00000600237 5164 ntTSL 516.71■□□□□ 0.272e-6■□□□□ 8.3
XRCC6P12956 SYMPK-211ENST00000598364 995 ntTSL 316.12■□□□□ 0.172e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-214ENST00000513250 567 ntTSL 315.9■□□□□ 0.142e-6■□□□□ 8.3
XRCC6P12956 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.042e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC15.09■□□□□ 0.012e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-203ENST00000503151 627 ntTSL 314.77□□□□□ -0.052e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-209ENST00000579889 568 ntTSL 314.45□□□□□ -0.12e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-213ENST00000581441 552 ntTSL 414.45□□□□□ -0.12e-6■□□□□ 8.3
XRCC6P12956 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.122e-6■□□□□ 8.3
XRCC6P12956 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.122e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-210ENST00000508765 631 ntTSL 314.2□□□□□ -0.142e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.212e-6■□□□□ 8.3
XRCC6P12956 KIF2A-201ENST00000381103 3360 ntTSL 1 (best) BASIC13.61□□□□□ -0.232e-6■□□□□ 8.3
XRCC6P12956 CLPTM1L-202ENST00000503042 3540 ntTSL 213.5□□□□□ -0.252e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC13.07□□□□□ -0.322e-6■□□□□ 8.3
XRCC6P12956 FBXL13-203ENST00000379308 2577 ntTSL 5 BASIC13.02□□□□□ -0.322e-6■□□□□ 8.3
XRCC6P12956 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC12.74□□□□□ -0.372e-6■□□□□ 8.3
XRCC6P12956 TIMELESS-205ENST00000557589 2784 ntTSL 212.4□□□□□ -0.432e-6■□□□□ 8.3
XRCC6P12956 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.462e-6■□□□□ 8.3
XRCC6P12956 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.562e-6■□□□□ 8.3
XRCC6P12956 SLC4A2-208ENST00000469467 442 ntTSL 210.9□□□□□ -0.662e-6■□□□□ 8.3
XRCC6P12956 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC10.82□□□□□ -0.682e-6■□□□□ 8.3
XRCC6P12956 FBXL13-206ENST00000448002 2582 ntTSL 1 (best)10.62□□□□□ -0.712e-6■□□□□ 8.3
XRCC6P12956 KIF2A-204ENST00000504883 783 ntTSL 210.28□□□□□ -0.762e-6■□□□□ 8.3
XRCC6P12956 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC9.64□□□□□ -0.872e-6■□□□□ 8.3
XRCC6P12956 FBXL13-211ENST00000477915 743 ntTSL 58.03□□□□□ -1.122e-6■□□□□ 8.3
XRCC6P12956 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.152e-6■□□□□ 8.3
XRCC6P12956 KIF2A-210ENST00000514082 874 ntTSL 1 (best)7.07□□□□□ -1.282e-6■□□□□ 8.3
XRCC6P12956 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.57□□□□□ -1.362e-6■□□□□ 8.3
XRCC6P12956 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.85□□□□□ -1.472e-6■□□□□ 8.3
XRCC6P12956 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.84□□□□□ -1.82e-6■□□□□ 8.3
XRCC6P12956 DUS1L-214ENST00000582407 714 ntTSL 519.06■□□□□ 0.645e-9■□□□□ 8.2
XRCC6P12956 DUS1L-208ENST00000578264 1071 ntTSL 518.9■□□□□ 0.625e-9■□□□□ 8.2
XRCC6P12956 FASN-203ENST00000579410 424 ntTSL 211.24□□□□□ -0.615e-9■□□□□ 8.2
XRCC6P12956 CHD2-226ENST00000636881 3545 ntTSL 510.89□□□□□ -0.675e-9■□□□□ 8.2
XRCC6P12956 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.695e-9■□□□□ 8.2
XRCC6P12956 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC10.53□□□□□ -0.725e-9■□□□□ 8.2
XRCC6P12956 SCAF11-211ENST00000547950 697 ntTSL 27.45□□□□□ -1.225e-9■□□□□ 8.2
XRCC6P12956 CHD2-227ENST00000637572 4452 ntTSL 56.09□□□□□ -1.445e-9■□□□□ 8.2
XRCC6P12956 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.74□□□□□ -1.495e-9■□□□□ 8.2
Retrieved 100 of 6,788 protein–RNA pairs in 223.7 ms