RNA–Protein interactions for RNA: ENST00000583060.1

NFE2L1-216, Transcript of nuclear factor, erythroid 2 like 1, humanhuman

TSL 3

Gene NFE2L1, Length 477 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE2L1-216ENST00000583060 NISCHQ9Y2I1 1504 aa49.98■■■■■ 5.59
NFE2L1-216ENST00000583060 ABCC9O60706 1549 aa45.76■■■■■ 4.92
NFE2L1-216ENST00000583060 CCDC180Q9P1Z9 1646 aa45.12■■■■■ 4.81
NFE2L1-216ENST00000583060 DNAJC5BQ9UF47 199 aa43.51■■■■■ 4.56
NFE2L1-216ENST00000583060 RB1CC1Q8TDY2 1594 aa43.26■■■■■ 4.52
NFE2L1-216ENST00000583060 NACADO15069 1562 aa42.8■■■■■ 4.44
NFE2L1-216ENST00000583060 DCAF8L2P0C7V8 631 aa42.52■■■■■ 4.4
NFE2L1-216ENST00000583060 PABPN1Q86U42 306 aaKnown RBP eCLIP42.52■■■■■ 4.4
NFE2L1-216ENST00000583060 UNC13AQ9UPW8 1703 aa42.34■■■■■ 4.37
NFE2L1-216ENST00000583060 BICRAQ9NZM4 1560 aa42.03■■■■■ 4.32
NFE2L1-216ENST00000583060 MYO15BQ96JP2 1530 aa41.98■■■■■ 4.31
NFE2L1-216ENST00000583060 SHROOM4Q9ULL8 1493 aa41.35■■■■■ 4.21
NFE2L1-216ENST00000583060 CC2D2AQ9P2K1 1620 aa41.3■■■■■ 4.2
NFE2L1-216ENST00000583060 CECR2Q9BXF3 1484 aa41.28■■■■■ 4.2
NFE2L1-216ENST00000583060 ZCCHC6Q5VYS8 1495 aaKnown RBP41.27■■■■■ 4.2
NFE2L1-216ENST00000583060 DCAF1Q9Y4B6 1507 aa41.21■■■■■ 4.19
NFE2L1-216ENST00000583060 SCRIBQ14160 1630 aa41.1■■■■■ 4.17
NFE2L1-216ENST00000583060 EIF4G1Q04637 1599 aaKnown RBP41.05■■■■■ 4.16
NFE2L1-216ENST00000583060 DNAJC5Q9H3Z4 198 aa40.4■■■■■ 4.06
NFE2L1-216ENST00000583060 CUX2O14529 1486 aa39.68■■■■□ 3.94
NFE2L1-216ENST00000583060 ERCC6Q03468 1493 aa39.55■■■■□ 3.92
NFE2L1-216ENST00000583060 NCAPD3P42695 1498 aa39.52■■■■□ 3.92
NFE2L1-216ENST00000583060 ATAD2BQ9ULI0 1458 aa39.32■■■■□ 3.89
NFE2L1-216ENST00000583060 SMARCA2P51531 1590 aa39.16■■■■□ 3.86
NFE2L1-216ENST00000583060 HMGXB3Q12766 1538 aa39.16■■■■□ 3.86
NFE2L1-216ENST00000583060 NESP48681 1621 aa39.14■■■■□ 3.86
NFE2L1-216ENST00000583060 SMARCA4P51532 1647 aa39.13■■■■□ 3.85
NFE2L1-216ENST00000583060 BAZ1BQ9UIG0 1483 aaKnown RBP38.91■■■■□ 3.82
NFE2L1-216ENST00000583060 THOC2Q8NI27 1593 aaKnown RBP38.85■■■■□ 3.81
NFE2L1-216ENST00000583060 BAZ1AQ9NRL2 1556 aaPredicted RBP38.83■■■■□ 3.81
NFE2L1-216ENST00000583060 LAMC3Q9Y6N6 1575 aa38.74■■■■□ 3.79
NFE2L1-216ENST00000583060 PEG3Q9GZU2 1588 aa38.73■■■■□ 3.79
NFE2L1-216ENST00000583060 KIF21AQ7Z4S6 1674 aa38.62■■■■□ 3.77
NFE2L1-216ENST00000583060 PDS5BQ9NTI5 1447 aa38.54■■■■□ 3.76
NFE2L1-216ENST00000583060 MROH2BQ7Z745 1585 aa38.52■■■■□ 3.76
NFE2L1-216ENST00000583060 TRIM41Q8WV44 630 aa38.39■■■■□ 3.74
NFE2L1-216ENST00000583060 CADPSQ9ULU8 1353 aa38.31■■■■□ 3.72
NFE2L1-216ENST00000583060 MRC2Q9UBG0 1479 aa38.24■■■■□ 3.71
NFE2L1-216ENST00000583060 WDR62O43379 1518 aa38.17■■■■□ 3.7
NFE2L1-216ENST00000583060 WIZO95785 1651 aa38.04■■■■□ 3.68
NFE2L1-216ENST00000583060 CEP164Q9UPV0 1460 aa37.96■■■■□ 3.67
NFE2L1-216ENST00000583060 FANCD2Q9BXW9 1451 aa37.87■■■■□ 3.65
NFE2L1-216ENST00000583060 OSCARQ8IYS5 282 aa37.79■■■■□ 3.64
NFE2L1-216ENST00000583060 CFTRP13569 1480 aa37.72■■■■□ 3.63
NFE2L1-216ENST00000583060 URB2Q14146 1524 aaKnown RBP37.6■■■■□ 3.61
NFE2L1-216ENST00000583060 TOP2AP11388 1531 aaKnown RBP37.48■■■■□ 3.59
NFE2L1-216ENST00000583060 RSF1Q96T23 1441 aaPredicted RBP37.48■■■■□ 3.59
NFE2L1-216ENST00000583060 RIMBP3CA6NJZ7 1639 aa37.37■■■■□ 3.57
NFE2L1-216ENST00000583060 RIMBP3BA6NNM3 1639 aa37.37■■■■□ 3.57
NFE2L1-216ENST00000583060 RIMBP3Q9UFD9 1639 aa37.37■■■■□ 3.57
NFE2L1-216ENST00000583060 PRDM2Q13029 1718 aa37.33■■■■□ 3.57
NFE2L1-216ENST00000583060 ZNF608Q9ULD9 1512 aaPredicted RBP37.26■■■■□ 3.55
NFE2L1-216ENST00000583060 IFT140Q96RY7 1462 aa37.23■■■■□ 3.55
NFE2L1-216ENST00000583060 ARHGEF11O15085 1522 aa37.17■■■■□ 3.54
NFE2L1-216ENST00000583060 TOPBP1Q92547 1522 aa37.09■■■■□ 3.53
NFE2L1-216ENST00000583060 CCDC88BA6NC98 1476 aa37.07■■■■□ 3.53
NFE2L1-216ENST00000583060 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
NFE2L1-216ENST00000583060 CYB5RLQ6IPT4 315 aa36.97■■■■□ 3.51
NFE2L1-216ENST00000583060 ABCC8Q09428 1581 aa36.95■■■■□ 3.51
NFE2L1-216ENST00000583060 CHD1O14646 1710 aa36.88■■■■□ 3.49
NFE2L1-216ENST00000583060 DNMBPQ6XZF7 1577 aa36.88■■■■□ 3.49
NFE2L1-216ENST00000583060 AQRO60306 1485 aaKnown RBP eCLIP36.84■■■■□ 3.49
NFE2L1-216ENST00000583060 TARBP1Q13395 1621 aaKnown RBP36.8■■■■□ 3.48
NFE2L1-216ENST00000583060 TRHP20396 242 aaPredicted RBP36.77■■■■□ 3.48
NFE2L1-216ENST00000583060 ARAP1Q96P48 1450 aa36.76■■■■□ 3.48
NFE2L1-216ENST00000583060 FBLN2P98095 1184 aa36.75■■■■□ 3.47
NFE2L1-216ENST00000583060 POLA1P09884 1462 aaPredicted RBP36.66■■■■□ 3.46
NFE2L1-216ENST00000583060 RAD54L2Q9Y4B4 1467 aa36.56■■■■□ 3.44
NFE2L1-216ENST00000583060 TDRD9Q8NDG6 1382 aaKnown RBP36.52■■■■□ 3.44
NFE2L1-216ENST00000583060 SOGA1O94964 1423 aa36.5■■■■□ 3.43
NFE2L1-216ENST00000583060 SNAPC4Q5SXM2 1469 aa36.44■■■■□ 3.42
NFE2L1-216ENST00000583060 CLASP1Q7Z460 1538 aa36.41■■■■□ 3.42
NFE2L1-216ENST00000583060 CHMP7Q8WUX9 453 aaPredicted RBP36.36■■■■□ 3.41
NFE2L1-216ENST00000583060 WDR97A6NE52 1622 aa36.36■■■■□ 3.41
NFE2L1-216ENST00000583060 FGD5Q6ZNL6 1462 aa36.35■■■■□ 3.41
NFE2L1-216ENST00000583060 SYNJ1O43426 1573 aa36.34■■■■□ 3.41
NFE2L1-216ENST00000583060 MAGI1Q96QZ7 1491 aaPredicted RBP36.3■■■■□ 3.4
NFE2L1-216ENST00000583060 GRIN2BQ13224 1484 aa36.24■■■■□ 3.39
NFE2L1-216ENST00000583060 CUX1P39880 1505 aa36.22■■■■□ 3.39
NFE2L1-216ENST00000583060 SYNJ2O15056 1496 aa36.19■■■■□ 3.38
NFE2L1-216ENST00000583060 AEBP2Q6ZN18 517 aaPredicted RBP36.15■■■■□ 3.38
NFE2L1-216ENST00000583060 PBRM1Q86U86 1689 aa36.08■■■■□ 3.37
NFE2L1-216ENST00000583060 GAPVD1Q14C86 1478 aa36.06■■■■□ 3.36
NFE2L1-216ENST00000583060 ABCA5Q8WWZ7 1642 aa35.9■■■■□ 3.34
NFE2L1-216ENST00000583060 ABCA10Q8WWZ4 1543 aa35.89■■■■□ 3.34
NFE2L1-216ENST00000583060 ERCC6L2Q5T890 1561 aa35.82■■■■□ 3.32
NFE2L1-216ENST00000583060 GRIN2AQ12879 1464 aa35.78■■■■□ 3.32
NFE2L1-216ENST00000583060 CEP170Q5SW79 1584 aa35.71■■■■□ 3.31
NFE2L1-216ENST00000583060 ADAMTS12P58397 1594 aa35.68■■■■□ 3.3
NFE2L1-216ENST00000583060 NUP160Q12769 1436 aa35.67■■■■□ 3.3
NFE2L1-216ENST00000583060 WRNQ14191 1432 aaPredicted RBP eCLIP35.62■■■■□ 3.29
NFE2L1-216ENST00000583060 SHROOM2Q13796 1616 aa35.59■■■■□ 3.29
NFE2L1-216ENST00000583060 FHAD1B1AJZ9 1412 aa35.55■■■■□ 3.28
NFE2L1-216ENST00000583060 KIF13AQ9H1H9 1805 aa35.51■■■■□ 3.28
NFE2L1-216ENST00000583060 BIVM-ERCC5R4GMW8 1640 aa35.47■■■■□ 3.27
NFE2L1-216ENST00000583060 TOP2BQ02880 1626 aa35.46■■■■□ 3.27
NFE2L1-216ENST00000583060 ERICH3Q5RHP9 1530 aa35.42■■■■□ 3.26
NFE2L1-216ENST00000583060 PRG4Q92954 1404 aaPredicted RBP35.4■■■■□ 3.26
NFE2L1-216ENST00000583060 SUPT5HO00267 1087 aaKnown RBP35.39■■■■□ 3.26
NFE2L1-216ENST00000583060 JPH4Q96JJ6 628 aa35.34■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms