RNA–Protein interactions for RNA: ENST00000507807.3

CLPTM1L-209, Transcript of CLPTM1 like, humanhuman

TSL 1 (best) BASIC

Gene CLPTM1L, Length 1,740 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-209ENST00000507807 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
CLPTM1L-209ENST00000507807 CCDC180Q9P1Z9 1646 aa31.88■■■□□ 2.69
CLPTM1L-209ENST00000507807 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
CLPTM1L-209ENST00000507807 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
CLPTM1L-209ENST00000507807 DCAF8L2P0C7V8 631 aa30.27■■■□□ 2.44
CLPTM1L-209ENST00000507807 SHROOM4Q9ULL8 1493 aa30.23■■■□□ 2.43
CLPTM1L-209ENST00000507807 ABCC9O60706 1549 aa29.98■■■□□ 2.39
CLPTM1L-209ENST00000507807 MYO15BQ96JP2 1530 aa29.95■■■□□ 2.39
CLPTM1L-209ENST00000507807 NACADO15069 1562 aa29.67■■■□□ 2.34
CLPTM1L-209ENST00000507807 SCRIBQ14160 1630 aa29.41■■■□□ 2.3
CLPTM1L-209ENST00000507807 RB1CC1Q8TDY2 1594 aa29.32■■■□□ 2.28
CLPTM1L-209ENST00000507807 SUPT5HO00267 1087 aaKnown RBP29.2■■■□□ 2.27
CLPTM1L-209ENST00000507807 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.2
CLPTM1L-209ENST00000507807 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.18
CLPTM1L-209ENST00000507807 CECR2Q9BXF3 1484 aa28.62■■■□□ 2.17
CLPTM1L-209ENST00000507807 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
CLPTM1L-209ENST00000507807 MROH2BQ7Z745 1585 aa28.47■■■□□ 2.15
CLPTM1L-209ENST00000507807 PABPN1Q86U42 306 aaKnown RBP eCLIP28.38■■■□□ 2.13
CLPTM1L-209ENST00000507807 BAZ1AQ9NRL2 1556 aaPredicted RBP28.36■■■□□ 2.13
CLPTM1L-209ENST00000507807 WIZO95785 1651 aa28.22■■■□□ 2.11
CLPTM1L-209ENST00000507807 SMARCA4P51532 1647 aa28.21■■■□□ 2.11
CLPTM1L-209ENST00000507807 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
CLPTM1L-209ENST00000507807 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
CLPTM1L-209ENST00000507807 PEG3Q9GZU2 1588 aa27.88■■■□□ 2.05
CLPTM1L-209ENST00000507807 ATAD2BQ9ULI0 1458 aa27.72■■■□□ 2.03
CLPTM1L-209ENST00000507807 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
CLPTM1L-209ENST00000507807 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
CLPTM1L-209ENST00000507807 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
CLPTM1L-209ENST00000507807 BAZ1BQ9UIG0 1483 aaKnown RBP27.53■■■□□ 2
CLPTM1L-209ENST00000507807 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
CLPTM1L-209ENST00000507807 TRIM41Q8WV44 630 aa27.41■■□□□ 1.98
CLPTM1L-209ENST00000507807 HMGXB3Q12766 1538 aa27.38■■□□□ 1.97
CLPTM1L-209ENST00000507807 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
CLPTM1L-209ENST00000507807 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
CLPTM1L-209ENST00000507807 LOC105371045A0A1W2PR82 267 aa27.09■■□□□ 1.93
CLPTM1L-209ENST00000507807 WRNQ14191 1432 aaPredicted RBP eCLIP26.96■■□□□ 1.91
CLPTM1L-209ENST00000507807 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
CLPTM1L-209ENST00000507807 CFTRP13569 1480 aa26.9■■□□□ 1.9
CLPTM1L-209ENST00000507807 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
CLPTM1L-209ENST00000507807 SOGA1O94964 1423 aa26.75■■□□□ 1.87
CLPTM1L-209ENST00000507807 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
CLPTM1L-209ENST00000507807 TOP2BQ02880 1626 aa26.69■■□□□ 1.86
CLPTM1L-209ENST00000507807 EEA1Q15075 1411 aa26.67■■□□□ 1.86
CLPTM1L-209ENST00000507807 PRDM2Q13029 1718 aa26.66■■□□□ 1.86
CLPTM1L-209ENST00000507807 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
CLPTM1L-209ENST00000507807 BIVM-ERCC5R4GMW8 1640 aa26.64■■□□□ 1.86
CLPTM1L-209ENST00000507807 CUX1P39880 1505 aa26.6■■□□□ 1.85
CLPTM1L-209ENST00000507807 CSRNP3Q8WYN3 585 aa26.55■■□□□ 1.84
CLPTM1L-209ENST00000507807 EHMT2Q96KQ7 1210 aa26.55■■□□□ 1.84
CLPTM1L-209ENST00000507807 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.83
CLPTM1L-209ENST00000507807 NESP48681 1621 aa26.44■■□□□ 1.82
CLPTM1L-209ENST00000507807 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
CLPTM1L-209ENST00000507807 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.81
CLPTM1L-209ENST00000507807 TNIKQ9UKE5 1360 aa26.33■■□□□ 1.81
CLPTM1L-209ENST00000507807 KIF21BO75037 1637 aa26.32■■□□□ 1.8
CLPTM1L-209ENST00000507807 GOLGA3Q08378 1498 aa26.32■■□□□ 1.8
CLPTM1L-209ENST00000507807 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
CLPTM1L-209ENST00000507807 FGD5Q6ZNL6 1462 aa26.24■■□□□ 1.79
CLPTM1L-209ENST00000507807 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
CLPTM1L-209ENST00000507807 DNMBPQ6XZF7 1577 aa26.22■■□□□ 1.79
CLPTM1L-209ENST00000507807 CEP162Q5TB80 1403 aa26.21■■□□□ 1.79
CLPTM1L-209ENST00000507807 UBTFP17480 764 aaKnown RBP26.19■■□□□ 1.78
CLPTM1L-209ENST00000507807 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
CLPTM1L-209ENST00000507807 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
CLPTM1L-209ENST00000507807 RAPGEF2Q9Y4G8 1499 aa26.18■■□□□ 1.78
CLPTM1L-209ENST00000507807 PRXQ9BXM0 1461 aa26.18■■□□□ 1.78
CLPTM1L-209ENST00000507807 URB2Q14146 1524 aaKnown RBP26.12■■□□□ 1.77
CLPTM1L-209ENST00000507807 CUX2O14529 1486 aa26.11■■□□□ 1.77
CLPTM1L-209ENST00000507807 ERICH3Q5RHP9 1530 aa26.1■■□□□ 1.77
CLPTM1L-209ENST00000507807 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
CLPTM1L-209ENST00000507807 PCGF6Q9BYE7 350 aa26.08■■□□□ 1.76
CLPTM1L-209ENST00000507807 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
CLPTM1L-209ENST00000507807 IGF1RP08069 1367 aa26.04■■□□□ 1.76
CLPTM1L-209ENST00000507807 RAD54L2Q9Y4B4 1467 aa26.02■■□□□ 1.76
CLPTM1L-209ENST00000507807 ABCA10Q8WWZ4 1543 aa26.02■■□□□ 1.76
CLPTM1L-209ENST00000507807 TRIM26Q12899 539 aaPredicted RBP26■■□□□ 1.75
CLPTM1L-209ENST00000507807 CLIP1P30622 1438 aa25.94■■□□□ 1.74
CLPTM1L-209ENST00000507807 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
CLPTM1L-209ENST00000507807 CARMIL1Q5VZK9 1371 aa25.87■■□□□ 1.73
CLPTM1L-209ENST00000507807 MRC2Q9UBG0 1479 aa25.85■■□□□ 1.73
CLPTM1L-209ENST00000507807 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
CLPTM1L-209ENST00000507807 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
CLPTM1L-209ENST00000507807 PPARGC1BQ86YN6 1023 aaKnown RBP25.77■■□□□ 1.72
CLPTM1L-209ENST00000507807 VPS8Q8N3P4 1428 aa25.75■■□□□ 1.71
CLPTM1L-209ENST00000507807 TDRD9Q8NDG6 1382 aaKnown RBP25.74■■□□□ 1.71
CLPTM1L-209ENST00000507807 WDR62O43379 1518 aa25.72■■□□□ 1.71
CLPTM1L-209ENST00000507807 RANGAP1P46060 587 aaPredicted RBP25.71■■□□□ 1.71
CLPTM1L-209ENST00000507807 CUL7Q14999 1698 aa25.71■■□□□ 1.71
CLPTM1L-209ENST00000507807 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.71
CLPTM1L-209ENST00000507807 ARAP1Q96P48 1450 aa25.68■■□□□ 1.7
CLPTM1L-209ENST00000507807 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
CLPTM1L-209ENST00000507807 ARHGAP35Q9NRY4 1499 aa25.63■■□□□ 1.69
CLPTM1L-209ENST00000507807 IFT140Q96RY7 1462 aa25.58■■□□□ 1.68
CLPTM1L-209ENST00000507807 THOC2Q8NI27 1593 aaKnown RBP25.57■■□□□ 1.68
CLPTM1L-209ENST00000507807 HRCP23327 699 aa25.56■■□□□ 1.68
CLPTM1L-209ENST00000507807 AQRO60306 1485 aaKnown RBP eCLIP25.54■■□□□ 1.682e-6■■■■■ 27.5
CLPTM1L-209ENST00000507807 ZNF608Q9ULD9 1512 aaPredicted RBP25.48■■□□□ 1.67
CLPTM1L-209ENST00000507807 PBRM1Q86U86 1689 aa25.48■■□□□ 1.67
CLPTM1L-209ENST00000507807 TTBK1Q5TCY1 1321 aaPredicted RBP25.47■■□□□ 1.67
CLPTM1L-209ENST00000507807 GRIN2BQ13224 1484 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms