RNA–Protein interactions for RNA: ENST00000508765.5

CLPTM1L-210, Transcript of CLPTM1 like, humanhuman

TSL 3

Gene CLPTM1L, Length 631 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-210ENST00000508765 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
CLPTM1L-210ENST00000508765 ABCC9O60706 1549 aa28.43■■■□□ 2.14
CLPTM1L-210ENST00000508765 CCDC180Q9P1Z9 1646 aa28.33■■■□□ 2.13
CLPTM1L-210ENST00000508765 RB1CC1Q8TDY2 1594 aa27.02■■□□□ 1.92
CLPTM1L-210ENST00000508765 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
CLPTM1L-210ENST00000508765 NACADO15069 1562 aa26.84■■□□□ 1.89
CLPTM1L-210ENST00000508765 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
CLPTM1L-210ENST00000508765 PABPN1Q86U42 306 aaKnown RBP eCLIP26.55■■□□□ 1.84
CLPTM1L-210ENST00000508765 MYO15BQ96JP2 1530 aa26.47■■□□□ 1.83
CLPTM1L-210ENST00000508765 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
CLPTM1L-210ENST00000508765 UNC13AQ9UPW8 1703 aa26.26■■□□□ 1.79
CLPTM1L-210ENST00000508765 BICRAQ9NZM4 1560 aa26.18■■□□□ 1.78
CLPTM1L-210ENST00000508765 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
CLPTM1L-210ENST00000508765 SCRIBQ14160 1630 aa25.93■■□□□ 1.74
CLPTM1L-210ENST00000508765 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
CLPTM1L-210ENST00000508765 CC2D2AQ9P2K1 1620 aa25.6■■□□□ 1.69
CLPTM1L-210ENST00000508765 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
CLPTM1L-210ENST00000508765 EIF4G1Q04637 1599 aaKnown RBP25.57■■□□□ 1.68
CLPTM1L-210ENST00000508765 NCAPD3P42695 1498 aa24.81■■□□□ 1.56
CLPTM1L-210ENST00000508765 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
CLPTM1L-210ENST00000508765 SMARCA4P51532 1647 aa24.7■■□□□ 1.54
CLPTM1L-210ENST00000508765 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
CLPTM1L-210ENST00000508765 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
CLPTM1L-210ENST00000508765 HMGXB3Q12766 1538 aa24.59■■□□□ 1.53
CLPTM1L-210ENST00000508765 ERCC6Q03468 1493 aa24.57■■□□□ 1.52
CLPTM1L-210ENST00000508765 BAZ1BQ9UIG0 1483 aaKnown RBP24.55■■□□□ 1.52
CLPTM1L-210ENST00000508765 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
CLPTM1L-210ENST00000508765 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
CLPTM1L-210ENST00000508765 CUX2O14529 1486 aa24.42■■□□□ 1.5
CLPTM1L-210ENST00000508765 NESP48681 1621 aa24.41■■□□□ 1.5
CLPTM1L-210ENST00000508765 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
CLPTM1L-210ENST00000508765 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
CLPTM1L-210ENST00000508765 PDS5BQ9NTI5 1447 aa24.16■■□□□ 1.46
CLPTM1L-210ENST00000508765 WIZO95785 1651 aa24.13■■□□□ 1.45
CLPTM1L-210ENST00000508765 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
CLPTM1L-210ENST00000508765 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
CLPTM1L-210ENST00000508765 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
CLPTM1L-210ENST00000508765 KIF21AQ7Z4S6 1674 aa24■■□□□ 1.43
CLPTM1L-210ENST00000508765 MRC2Q9UBG0 1479 aa23.91■■□□□ 1.42
CLPTM1L-210ENST00000508765 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
CLPTM1L-210ENST00000508765 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
CLPTM1L-210ENST00000508765 FANCD2Q9BXW9 1451 aa23.82■■□□□ 1.4
CLPTM1L-210ENST00000508765 CFTRP13569 1480 aa23.81■■□□□ 1.4
CLPTM1L-210ENST00000508765 WDR62O43379 1518 aa23.79■■□□□ 1.4
CLPTM1L-210ENST00000508765 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
CLPTM1L-210ENST00000508765 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
CLPTM1L-210ENST00000508765 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
CLPTM1L-210ENST00000508765 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
CLPTM1L-210ENST00000508765 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
CLPTM1L-210ENST00000508765 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
CLPTM1L-210ENST00000508765 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
CLPTM1L-210ENST00000508765 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
CLPTM1L-210ENST00000508765 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
CLPTM1L-210ENST00000508765 DNMBPQ6XZF7 1577 aa23.25■■□□□ 1.31
CLPTM1L-210ENST00000508765 SUPT5HO00267 1087 aaKnown RBP23.16■■□□□ 1.3
CLPTM1L-210ENST00000508765 AQRO60306 1485 aaKnown RBP eCLIP23.14■■□□□ 1.297e-7■■■□□ 15.1
CLPTM1L-210ENST00000508765 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
CLPTM1L-210ENST00000508765 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
CLPTM1L-210ENST00000508765 FBLN2P98095 1184 aa23.08■■□□□ 1.29
CLPTM1L-210ENST00000508765 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.28
CLPTM1L-210ENST00000508765 SOGA1O94964 1423 aa23.08■■□□□ 1.28
CLPTM1L-210ENST00000508765 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
CLPTM1L-210ENST00000508765 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
CLPTM1L-210ENST00000508765 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
CLPTM1L-210ENST00000508765 CUX1P39880 1505 aa22.98■■□□□ 1.27
CLPTM1L-210ENST00000508765 RIMBP3CA6NJZ7 1639 aa22.97■■□□□ 1.27
CLPTM1L-210ENST00000508765 RIMBP3BA6NNM3 1639 aa22.97■■□□□ 1.27
CLPTM1L-210ENST00000508765 RIMBP3Q9UFD9 1639 aa22.97■■□□□ 1.27
CLPTM1L-210ENST00000508765 ARHGEF11O15085 1522 aa22.95■■□□□ 1.26
CLPTM1L-210ENST00000508765 CHD1O14646 1710 aa22.9■■□□□ 1.26
CLPTM1L-210ENST00000508765 CYB5RLQ6IPT4 315 aa22.89■■□□□ 1.25
CLPTM1L-210ENST00000508765 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
CLPTM1L-210ENST00000508765 SNAPC4Q5SXM2 1469 aa22.89■■□□□ 1.25
CLPTM1L-210ENST00000508765 WDR97A6NE52 1622 aa22.84■■□□□ 1.25
CLPTM1L-210ENST00000508765 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
CLPTM1L-210ENST00000508765 MAGI1Q96QZ7 1491 aaPredicted RBP22.8■■□□□ 1.24
CLPTM1L-210ENST00000508765 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
CLPTM1L-210ENST00000508765 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
CLPTM1L-210ENST00000508765 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
CLPTM1L-210ENST00000508765 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
CLPTM1L-210ENST00000508765 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
CLPTM1L-210ENST00000508765 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
CLPTM1L-210ENST00000508765 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
CLPTM1L-210ENST00000508765 TRHP20396 242 aaPredicted RBP22.65■■□□□ 1.22
CLPTM1L-210ENST00000508765 PBRM1Q86U86 1689 aa22.63■■□□□ 1.21
CLPTM1L-210ENST00000508765 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
CLPTM1L-210ENST00000508765 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
CLPTM1L-210ENST00000508765 BIVM-ERCC5R4GMW8 1640 aa22.55■■□□□ 1.2
CLPTM1L-210ENST00000508765 GRIN2AQ12879 1464 aa22.53■■□□□ 1.2
CLPTM1L-210ENST00000508765 FHAD1B1AJZ9 1412 aa22.49■■□□□ 1.19
CLPTM1L-210ENST00000508765 ADAMTS12P58397 1594 aa22.48■■□□□ 1.19
CLPTM1L-210ENST00000508765 NUP160Q12769 1436 aa22.44■■□□□ 1.18
CLPTM1L-210ENST00000508765 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
CLPTM1L-210ENST00000508765 CEP170Q5SW79 1584 aa22.4■■□□□ 1.18
CLPTM1L-210ENST00000508765 ERCC6L2Q5T890 1561 aa22.35■■□□□ 1.17
CLPTM1L-210ENST00000508765 JPH4Q96JJ6 628 aa22.3■■□□□ 1.16
CLPTM1L-210ENST00000508765 PRG4Q92954 1404 aaPredicted RBP22.27■■□□□ 1.16
CLPTM1L-210ENST00000508765 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
CLPTM1L-210ENST00000508765 SHROOM2Q13796 1616 aa22.25■■□□□ 1.15
CLPTM1L-210ENST00000508765 IGF1RP08069 1367 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms