RNA–Protein interactions for RNA: ENST00000513029.5

RNF44-207, Transcript of ring finger protein 44, humanhuman

TSL 2

Gene RNF44, Length 1,647 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44-207ENST00000513029 NISCHQ9Y2I1 1504 aa42.4■■■■■ 4.38
RNF44-207ENST00000513029 CCDC180Q9P1Z9 1646 aa37.41■■■■□ 3.58
RNF44-207ENST00000513029 ABCC9O60706 1549 aa35.65■■■■□ 3.3
RNF44-207ENST00000513029 ZCCHC6Q5VYS8 1495 aaKnown RBP35.51■■■■□ 3.27
RNF44-207ENST00000513029 DCAF1Q9Y4B6 1507 aa35.18■■■■□ 3.22
RNF44-207ENST00000513029 MYO15BQ96JP2 1530 aa35.04■■■■□ 3.2
RNF44-207ENST00000513029 NACADO15069 1562 aa34.93■■■■□ 3.18
RNF44-207ENST00000513029 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
RNF44-207ENST00000513029 RB1CC1Q8TDY2 1594 aa34.74■■■■□ 3.15
RNF44-207ENST00000513029 SCRIBQ14160 1630 aa34.08■■■■□ 3.05
RNF44-207ENST00000513029 UNC13AQ9UPW8 1703 aa34.06■■■■□ 3.04
RNF44-207ENST00000513029 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
RNF44-207ENST00000513029 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
RNF44-207ENST00000513029 PABPN1Q86U42 306 aaKnown RBP eCLIP33.39■■■□□ 2.94
RNF44-207ENST00000513029 CECR2Q9BXF3 1484 aa32.89■■■□□ 2.86
RNF44-207ENST00000513029 BAZ1AQ9NRL2 1556 aaPredicted RBP32.81■■■□□ 2.84
RNF44-207ENST00000513029 SMARCA4P51532 1647 aa32.74■■■□□ 2.83
RNF44-207ENST00000513029 EIF4G1Q04637 1599 aaKnown RBP32.71■■■□□ 2.83
RNF44-207ENST00000513029 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
RNF44-207ENST00000513029 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
RNF44-207ENST00000513029 PEG3Q9GZU2 1588 aa32.46■■■□□ 2.79
RNF44-207ENST00000513029 WIZO95785 1651 aa32.38■■■□□ 2.77
RNF44-207ENST00000513029 CC2D2AQ9P2K1 1620 aa32.36■■■□□ 2.77
RNF44-207ENST00000513029 SMARCA2P51531 1590 aa32.34■■■□□ 2.77
RNF44-207ENST00000513029 ATAD2BQ9ULI0 1458 aa32.32■■■□□ 2.76
RNF44-207ENST00000513029 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
RNF44-207ENST00000513029 NCAPD3P42695 1498 aa32.2■■■□□ 2.75
RNF44-207ENST00000513029 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
RNF44-207ENST00000513029 TOP2AP11388 1531 aaKnown RBP32.08■■■□□ 2.73
RNF44-207ENST00000513029 BAZ1BQ9UIG0 1483 aaKnown RBP32.07■■■□□ 2.72
RNF44-207ENST00000513029 DNAJC5BQ9UF47 199 aa31.97■■■□□ 2.71
RNF44-207ENST00000513029 CCDC88BA6NC98 1476 aa31.67■■■□□ 2.66
RNF44-207ENST00000513029 CFTRP13569 1480 aa31.29■■■□□ 2.6
RNF44-207ENST00000513029 CADPSQ9ULU8 1353 aa31.26■■■□□ 2.6
RNF44-207ENST00000513029 LAMC3Q9Y6N6 1575 aa31.24■■■□□ 2.59
RNF44-207ENST00000513029 PRDM2Q13029 1718 aa31.24■■■□□ 2.59
RNF44-207ENST00000513029 NESP48681 1621 aa31.12■■■□□ 2.57
RNF44-207ENST00000513029 PDS5BQ9NTI5 1447 aa30.94■■■□□ 2.54
RNF44-207ENST00000513029 FANCD2Q9BXW9 1451 aa30.9■■■□□ 2.54
RNF44-207ENST00000513029 KIF21AQ7Z4S6 1674 aa30.85■■■□□ 2.53
RNF44-207ENST00000513029 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
RNF44-207ENST00000513029 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
RNF44-207ENST00000513029 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
RNF44-207ENST00000513029 ERCC6Q03468 1493 aa30.65■■■□□ 2.5
RNF44-207ENST00000513029 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
RNF44-207ENST00000513029 BIVM-ERCC5R4GMW8 1640 aa30.61■■■□□ 2.49
RNF44-207ENST00000513029 SYNJ1O43426 1573 aa30.6■■■□□ 2.49
RNF44-207ENST00000513029 CUX1P39880 1505 aa30.6■■■□□ 2.49
RNF44-207ENST00000513029 TOP2BQ02880 1626 aa30.6■■■□□ 2.49
RNF44-207ENST00000513029 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
RNF44-207ENST00000513029 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.49
RNF44-207ENST00000513029 URB2Q14146 1524 aaKnown RBP30.56■■■□□ 2.48
RNF44-207ENST00000513029 THOC2Q8NI27 1593 aaKnown RBP30.55■■■□□ 2.48
RNF44-207ENST00000513029 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
RNF44-207ENST00000513029 WDR62O43379 1518 aa30.5■■■□□ 2.47
RNF44-207ENST00000513029 TRIM41Q8WV44 630 aa30.45■■■□□ 2.47
RNF44-207ENST00000513029 FGD5Q6ZNL6 1462 aa30.34■■■□□ 2.45
RNF44-207ENST00000513029 POLA1P09884 1462 aaPredicted RBP30.32■■■□□ 2.44
RNF44-207ENST00000513029 CUX2O14529 1486 aa30.2■■■□□ 2.43
RNF44-207ENST00000513029 TARBP1Q13395 1621 aaKnown RBP30.17■■■□□ 2.42
RNF44-207ENST00000513029 SOGA1O94964 1423 aa30.17■■■□□ 2.42
RNF44-207ENST00000513029 WDR97A6NE52 1622 aa30.16■■■□□ 2.42
RNF44-207ENST00000513029 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
RNF44-207ENST00000513029 ABCA10Q8WWZ4 1543 aa30.13■■■□□ 2.41
RNF44-207ENST00000513029 IFT140Q96RY7 1462 aa30.11■■■□□ 2.41
RNF44-207ENST00000513029 EEA1Q15075 1411 aa29.98■■■□□ 2.39
RNF44-207ENST00000513029 KIF27Q86VH2 1401 aa29.97■■■□□ 2.39
RNF44-207ENST00000513029 ABCA5Q8WWZ7 1642 aa29.97■■■□□ 2.39
RNF44-207ENST00000513029 RUSC2Q8N2Y8 1516 aa29.95■■■□□ 2.38
RNF44-207ENST00000513029 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.37
RNF44-207ENST00000513029 TDRD9Q8NDG6 1382 aaKnown RBP29.87■■■□□ 2.37
RNF44-207ENST00000513029 EIF4G3O43432 1585 aaKnown RBP29.87■■■□□ 2.37
RNF44-207ENST00000513029 GAPVD1Q14C86 1478 aa29.86■■■□□ 2.37
RNF44-207ENST00000513029 PBRM1Q86U86 1689 aa29.81■■■□□ 2.36
RNF44-207ENST00000513029 AQRO60306 1485 aaKnown RBP eCLIP29.81■■■□□ 2.361e-7■■■■■ 35.3
RNF44-207ENST00000513029 ERICH3Q5RHP9 1530 aa29.8■■■□□ 2.36
RNF44-207ENST00000513029 CSRNP3Q8WYN3 585 aa29.75■■■□□ 2.35
RNF44-207ENST00000513029 IGF1RP08069 1367 aa29.75■■■□□ 2.35
RNF44-207ENST00000513029 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
RNF44-207ENST00000513029 FAM9AQ8IZU1 332 aaPredicted RBP29.73■■■□□ 2.35
RNF44-207ENST00000513029 CUL7Q14999 1698 aa29.71■■■□□ 2.35
RNF44-207ENST00000513029 PRXQ9BXM0 1461 aa29.65■■■□□ 2.34
RNF44-207ENST00000513029 KIF21BO75037 1637 aa29.64■■■□□ 2.34
RNF44-207ENST00000513029 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
RNF44-207ENST00000513029 ADAMTS12P58397 1594 aa29.6■■■□□ 2.33
RNF44-207ENST00000513029 CARMIL1Q5VZK9 1371 aa29.58■■■□□ 2.33
RNF44-207ENST00000513029 SNAPC4Q5SXM2 1469 aa29.57■■■□□ 2.32
RNF44-207ENST00000513029 FHAD1B1AJZ9 1412 aa29.54■■■□□ 2.32
RNF44-207ENST00000513029 RAPGEF2Q9Y4G8 1499 aa29.52■■■□□ 2.32
RNF44-207ENST00000513029 GOLGA3Q08378 1498 aa29.47■■■□□ 2.31
RNF44-207ENST00000513029 SYNJ2O15056 1496 aa29.46■■■□□ 2.31
RNF44-207ENST00000513029 GRIN2AQ12879 1464 aa29.37■■■□□ 2.29
RNF44-207ENST00000513029 CHD1O14646 1710 aa29.35■■■□□ 2.29
RNF44-207ENST00000513029 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
RNF44-207ENST00000513029 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
RNF44-207ENST00000513029 CTTNBP2Q8WZ74 1663 aa29.28■■■□□ 2.28
RNF44-207ENST00000513029 TNIKQ9UKE5 1360 aa29.25■■■□□ 2.27
RNF44-207ENST00000513029 NUP160Q12769 1436 aa29.23■■■□□ 2.27
RNF44-207ENST00000513029 UBTFP17480 764 aaKnown RBP29.22■■■□□ 2.27
RNF44-207ENST00000513029 EHMT2Q96KQ7 1210 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms