RNA–Protein interactions for RNA: ENST00000430117.6

CALCOCO1-202, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5 BASIC

Gene CALCOCO1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-202ENST00000430117 NISCHQ9Y2I1 1504 aa20.47■□□□□ 0.87
CALCOCO1-202ENST00000430117 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
CALCOCO1-202ENST00000430117 HRCP23327 699 aa18.73■□□□□ 0.59
CALCOCO1-202ENST00000430117 PPARGC1BQ86YN6 1023 aaKnown RBP18.59■□□□□ 0.57
CALCOCO1-202ENST00000430117 MYT1Q01538 1121 aa18.38■□□□□ 0.53
CALCOCO1-202ENST00000430117 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
CALCOCO1-202ENST00000430117 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
CALCOCO1-202ENST00000430117 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.39
CALCOCO1-202ENST00000430117 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
CALCOCO1-202ENST00000430117 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
CALCOCO1-202ENST00000430117 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-202ENST00000430117 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
CALCOCO1-202ENST00000430117 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
CALCOCO1-202ENST00000430117 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
CALCOCO1-202ENST00000430117 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
CALCOCO1-202ENST00000430117 FAM9AQ8IZU1 332 aaPredicted RBP17.29■□□□□ 0.36
CALCOCO1-202ENST00000430117 ZCCHC6Q5VYS8 1495 aaKnown RBP17.26■□□□□ 0.35
CALCOCO1-202ENST00000430117 PRKCSHP14314 528 aaPredicted RBP17.26■□□□□ 0.35
CALCOCO1-202ENST00000430117 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
CALCOCO1-202ENST00000430117 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
CALCOCO1-202ENST00000430117 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
CALCOCO1-202ENST00000430117 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
CALCOCO1-202ENST00000430117 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
CALCOCO1-202ENST00000430117 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
CALCOCO1-202ENST00000430117 ABCC9O60706 1549 aa17.09■□□□□ 0.33
CALCOCO1-202ENST00000430117 LOC105371045A0A1W2PR82 267 aa17.09■□□□□ 0.33
CALCOCO1-202ENST00000430117 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
CALCOCO1-202ENST00000430117 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
CALCOCO1-202ENST00000430117 ANP32EQ9BTT0 268 aa16.87■□□□□ 0.29
CALCOCO1-202ENST00000430117 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
CALCOCO1-202ENST00000430117 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
CALCOCO1-202ENST00000430117 ERICH6Q7L0X2 663 aa16.67■□□□□ 0.26
CALCOCO1-202ENST00000430117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
CALCOCO1-202ENST00000430117 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
CALCOCO1-202ENST00000430117 TSHZ2Q9NRE2 1034 aa16.52■□□□□ 0.24
CALCOCO1-202ENST00000430117 APLP2Q06481 763 aa16.47■□□□□ 0.23
CALCOCO1-202ENST00000430117 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
CALCOCO1-202ENST00000430117 NACADO15069 1562 aa16.42■□□□□ 0.22
CALCOCO1-202ENST00000430117 MIER1Q8N108 512 aa16.4■□□□□ 0.22
CALCOCO1-202ENST00000430117 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.22
CALCOCO1-202ENST00000430117 SCRIBQ14160 1630 aa16.38■□□□□ 0.21
CALCOCO1-202ENST00000430117 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
CALCOCO1-202ENST00000430117 ANO8Q9HCE9 1232 aaPredicted RBP16.36■□□□□ 0.21
CALCOCO1-202ENST00000430117 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
CALCOCO1-202ENST00000430117 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
CALCOCO1-202ENST00000430117 BCANQ96GW7 911 aa16.21■□□□□ 0.19
CALCOCO1-202ENST00000430117 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
CALCOCO1-202ENST00000430117 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
CALCOCO1-202ENST00000430117 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO1-202ENST00000430117 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
CALCOCO1-202ENST00000430117 SALL2Q9Y467 1007 aaPredicted RBP16.08■□□□□ 0.16
CALCOCO1-202ENST00000430117 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
CALCOCO1-202ENST00000430117 MSH5O43196 834 aa16.03■□□□□ 0.16
CALCOCO1-202ENST00000430117 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
CALCOCO1-202ENST00000430117 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
CALCOCO1-202ENST00000430117 DEKP35659 375 aaKnown RBP15.97■□□□□ 0.15
CALCOCO1-202ENST00000430117 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
CALCOCO1-202ENST00000430117 ITGAEP38570 1179 aa15.92■□□□□ 0.14
CALCOCO1-202ENST00000430117 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
CALCOCO1-202ENST00000430117 FKBP8Q14318 412 aa15.91■□□□□ 0.14
CALCOCO1-202ENST00000430117 MROH2BQ7Z745 1585 aa15.91■□□□□ 0.14
CALCOCO1-202ENST00000430117 UBE2Q2Q8WVN8 375 aa15.85■□□□□ 0.13
CALCOCO1-202ENST00000430117 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
CALCOCO1-202ENST00000430117 WIZO95785 1651 aa15.79■□□□□ 0.12
CALCOCO1-202ENST00000430117 NBR1Q14596 966 aa15.75■□□□□ 0.11
CALCOCO1-202ENST00000430117 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
CALCOCO1-202ENST00000430117 EIF5BO60841 1220 aaKnown RBP15.72■□□□□ 0.11
CALCOCO1-202ENST00000430117 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
CALCOCO1-202ENST00000430117 IL27Q8NEV9 243 aa15.71■□□□□ 0.11
CALCOCO1-202ENST00000430117 NEFLP07196 543 aa15.67■□□□□ 0.1
CALCOCO1-202ENST00000430117 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
CALCOCO1-202ENST00000430117 SMARCA4P51532 1647 aa15.64■□□□□ 0.09
CALCOCO1-202ENST00000430117 ERICH6BQ5W0A0 696 aa15.64■□□□□ 0.09
CALCOCO1-202ENST00000430117 FANCIQ9NVI1 1328 aa15.62■□□□□ 0.09
CALCOCO1-202ENST00000430117 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
CALCOCO1-202ENST00000430117 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
CALCOCO1-202ENST00000430117 PKNOX2Q96KN3 472 aa15.59■□□□□ 0.09
CALCOCO1-202ENST00000430117 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
CALCOCO1-202ENST00000430117 CDK11AQ9UQ88 783 aaPredicted RBP15.53■□□□□ 0.08
CALCOCO1-202ENST00000430117 EIF4G1Q04637 1599 aaKnown RBP15.48■□□□□ 0.07
CALCOCO1-202ENST00000430117 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
CALCOCO1-202ENST00000430117 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
CALCOCO1-202ENST00000430117 TRIM52Q96A61 297 aa15.48■□□□□ 0.07
CALCOCO1-202ENST00000430117 PAK3O75914 559 aaPredicted RBP15.45■□□□□ 0.06
CALCOCO1-202ENST00000430117 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
CALCOCO1-202ENST00000430117 SLC24A1O60721 1099 aa15.44■□□□□ 0.06
CALCOCO1-202ENST00000430117 RTL5Q5HYW3 569 aaPredicted RBP15.44■□□□□ 0.06
CALCOCO1-202ENST00000430117 NOP58Q9Y2X3 529 aaKnown RBP15.42■□□□□ 0.06
CALCOCO1-202ENST00000430117 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
CALCOCO1-202ENST00000430117 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
CALCOCO1-202ENST00000430117 PODXL2Q9NZ53 605 aa15.38■□□□□ 0.05
CALCOCO1-202ENST00000430117 ATAD2BQ9ULI0 1458 aa15.37■□□□□ 0.05
CALCOCO1-202ENST00000430117 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
CALCOCO1-202ENST00000430117 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
CALCOCO1-202ENST00000430117 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
CALCOCO1-202ENST00000430117 BAZ1BQ9UIG0 1483 aaKnown RBP15.28■□□□□ 0.04
CALCOCO1-202ENST00000430117 DDX10Q13206 875 aaKnown RBP15.26■□□□□ 0.03
CALCOCO1-202ENST00000430117 BRPF3Q9ULD4 1205 aa15.23■□□□□ 0.03
CALCOCO1-202ENST00000430117 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
CALCOCO1-202ENST00000430117 VSIG10Q8N0Z9 540 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms