Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 YMR272W-BYMR272W-B 108 nt1.74□□□□□ -2.13
TY2A-FP0CX61 YDR182W-AYDR182W-A 204 nt1.73□□□□□ -2.13
TY2A-FP0CX61 PAU2YEL049W 363 nt1.73□□□□□ -2.13
TY2A-FP0CX61 DBP6YNR038W 1890 nt1.73□□□□□ -2.13
TY2A-FP0CX61 SKI3YPR189W 4299 nt1.72□□□□□ -2.13
TY2A-FP0CX61 YER181CYER181C 324 nt1.72□□□□□ -2.13
TY2A-FP0CX61 SDH2YLL041C 801 nt1.72□□□□□ -2.13
TY2A-FP0CX61 YML099W-AYML099W-A 330 nt1.72□□□□□ -2.13
TY2A-FP0CX61 NIP100YPL174C 2607 nt1.71□□□□□ -2.13
TY2A-FP0CX61 YIL115W-AYIL115W-A 372 nt1.71□□□□□ -2.14
TY2A-FP0CX61 YPR063CYPR063C 423 nt1.71□□□□□ -2.14
TY2A-FP0CX61 AI5_ALPHAQ0070 1893 nt1.7□□□□□ -2.14
TY2A-FP0CX61 OST1YJL002C 1431 nt1.7□□□□□ -2.14
TY2A-FP0CX61 YOR231C-AYOR231C-A 201 nt1.7□□□□□ -2.14
TY2A-FP0CX61 MYO2YOR326W 4725 nt1.7□□□□□ -2.14
TY2A-FP0CX61 REV3YPL167C 4515 nt1.7□□□□□ -2.14
TY2A-FP0CX61 IRC20YLR247C 4671 nt1.69□□□□□ -2.14
TY2A-FP0CX61 MAD1YGL086W 2250 nt1.69□□□□□ -2.14
TY2A-FP0CX61 PKH3YDR466W 2697 nt1.69□□□□□ -2.14
TY2A-FP0CX61 RTP1YMR185W 2946 nt1.69□□□□□ -2.14
TY2A-FP0CX61 EMC5YIL027C 426 nt1.69□□□□□ -2.14
TY2A-FP0CX61 YMR290W-AYMR290W-A 348 nt1.69□□□□□ -2.14
TY2A-FP0CX61 RPL31AYDL075W 342 nt1.68□□□□□ -2.14
TY2A-FP0CX61 YMR175W-AYMR175W-A 195 nt1.68□□□□□ -2.14
TY2A-FP0CX61 HSL1YKL101W 4557 nt1.68□□□□□ -2.14
TY2A-FP0CX61 RAD34YDR314C 2079 nt1.68□□□□□ -2.14
TY2A-FP0CX61 CTF4YPR135W 2784 nt1.67□□□□□ -2.14
TY2A-FP0CX61 NOC3YLR002C 1992 nt1.67□□□□□ -2.14
TY2A-FP0CX61 YDL211CYDL211C 1119 nt1.67□□□□□ -2.14
TY2A-FP0CX61 YIL032CYIL032C 357 nt1.67□□□□□ -2.14
TY2A-FP0CX61 CFT1YDR301W 4074 nt1.66□□□□□ -2.14
TY2A-FP0CX61 SPC98YNL126W 2541 nt1.66□□□□□ -2.14
TY2A-FP0CX61 SPO24YPR036W-A 204 nt1.66□□□□□ -2.14
TY2A-FP0CX61 KCS1YDR017C 3153 nt1.65□□□□□ -2.14
TY2A-FP0CX61 YHL042WYHL042W 453 nt1.65□□□□□ -2.15
TY2A-FP0CX61 SEC5YDR166C 2916 nt1.65□□□□□ -2.15
TY2A-FP0CX61 YIR044CYIR044C 186 nt1.64□□□□□ -2.15
TY2A-FP0CX61 YPR010C-AYPR010C-A 219 nt1.64□□□□□ -2.15
TY2A-FP0CX61 SPT21YMR179W 2277 nt1.64□□□□□ -2.15
TY2A-FP0CX61 UFD2YDL190C 2886 nt1.64□□□□□ -2.15
TY2A-FP0CX61 RAD50YNL250W 3939 nt1.63□□□□□ -2.15
TY2A-FP0CX61 LCD1YDR499W 2244 nt1.63□□□□□ -2.15
TY2A-FP0CX61 YDR344CYDR344C 444 nt1.63□□□□□ -2.15
TY2A-FP0CX61 YJL022WYJL022W 309 nt1.63□□□□□ -2.15
TY2A-FP0CX61 NUT1YGL151W 3399 nt1.63□□□□□ -2.15
TY2A-FP0CX61 SCW11YGL028C 1629 nt1.62□□□□□ -2.15
TY2A-FP0CX61 MON2YNL297C 4911 nt1.62□□□□□ -2.15
TY2A-FP0CX61 snR60snR60 104 nt1.62□□□□□ -2.15
TY2A-FP0CX61 ALG13YGL047W 609 nt1.62□□□□□ -2.15
TY2A-FP0CX61 MEC1YBR136W 7107 nt1.62□□□□□ -2.15
TY2A-FP0CX61 YCK3YER123W 1575 nt1.62□□□□□ -2.15
TY2A-FP0CX61 LRE1YCL051W 1752 nt1.62□□□□□ -2.15
TY2A-FP0CX61 SAC3YDR159W 3906 nt1.61□□□□□ -2.15
TY2A-FP0CX61 COG8YML071C 1824 nt1.61□□□□□ -2.15
TY2A-FP0CX61 CUL3YGR003W 2235 nt1.61□□□□□ -2.15
TY2A-FP0CX61 SSS1YDR086C 243 nt1.61□□□□□ -2.15
TY2A-FP0CX61 RPL34BYIL052C 366 nt1.61□□□□□ -2.15
TY2A-FP0CX61 COF1YLL050C 432 nt1.61□□□□□ -2.15
TY2A-FP0CX61 SLI15YBR156C 2097 nt1.61□□□□□ -2.15
TY2A-FP0CX61 MPT5YGL178W 2580 nt1.6□□□□□ -2.15
TY2A-FP0CX61 BPH1YCR032W 6504 nt1.6□□□□□ -2.15
TY2A-FP0CX61 VPS54YDR027C 2670 nt1.6□□□□□ -2.15
TY2A-FP0CX61 ADR1YDR216W 3972 nt1.6□□□□□ -2.15
TY2A-FP0CX61 YOR019WYOR019W 2193 nt1.6□□□□□ -2.15
TY2A-FP0CX61 YHR210CYHR210C 1026 nt1.6□□□□□ -2.15
TY2A-FP0CX61 KIP1YBL063W 3336 nt1.6□□□□□ -2.15
TY2A-FP0CX61 ALK1YGL021W 2283 nt1.59□□□□□ -2.15
TY2A-FP0CX61 NCA2YPR155C 1851 nt1.59□□□□□ -2.15
TY2A-FP0CX61 YMR230W-AYMR230W-A 189 nt1.59□□□□□ -2.15
TY2A-FP0CX61 YOR376WYOR376W 369 nt1.59□□□□□ -2.15
TY2A-FP0CX61 SLX4YLR135W 2247 nt1.59□□□□□ -2.16
TY2A-FP0CX61 TRM3YDL112W 4311 nt1.59□□□□□ -2.16
TY2A-FP0CX61 SMC4YLR086W 4257 nt1.58□□□□□ -2.16
TY2A-FP0CX61 YGL217CYGL217C 342 nt1.58□□□□□ -2.16
TY2A-FP0CX61 YLR140WYLR140W 327 nt1.58□□□□□ -2.16
TY2A-FP0CX61 YCS4YLR272C 3531 nt1.58□□□□□ -2.16
TY2A-FP0CX61 BST1YFL025C 3090 nt1.58□□□□□ -2.16
TY2A-FP0CX61 YLL054CYLL054C 2532 nt1.58□□□□□ -2.16
TY2A-FP0CX61 PTP2YOR208W 2253 nt1.57□□□□□ -2.16
TY2A-FP0CX61 COG4YPR105C 2586 nt1.57□□□□□ -2.16
TY2A-FP0CX61 YOR093CYOR093C 4947 nt1.57□□□□□ -2.16
TY2A-FP0CX61 DNF3YMR162C 4971 nt1.57□□□□□ -2.16
TY2A-FP0CX61 HMRA2YCR096C 360 nt1.57□□□□□ -2.16
TY2A-FP0CX61 YGR069WYGR069W 336 nt1.57□□□□□ -2.16
TY2A-FP0CX61 VPS55YJR044C 423 nt1.57□□□□□ -2.16
TY2A-FP0CX61 KAP122YGL016W 3246 nt1.57□□□□□ -2.16
TY2A-FP0CX61 VIK1YPL253C 1944 nt1.56□□□□□ -2.16
TY2A-FP0CX61 YOR008C-AYOR008C-A 225 nt1.56□□□□□ -2.16
TY2A-FP0CX61 RAD61YDR014W 1944 nt1.56□□□□□ -2.16
TY2A-FP0CX61 PKH2YOL100W 3246 nt1.55□□□□□ -2.16
TY2A-FP0CX61 VPS15YBR097W 4365 nt1.55□□□□□ -2.16
TY2A-FP0CX61 YBL008W-AYBL008W-A 240 nt1.55□□□□□ -2.16
TY2A-FP0CX61 YLL007CYLL007C 1998 nt1.55□□□□□ -2.16
TY2A-FP0CX61 BRR2YER172C 6492 nt1.55□□□□□ -2.16
TY2A-FP0CX61 tT(UGU)HtT(UGU)H 72 nt1.54□□□□□ -2.16
TY2A-FP0CX61 INA22YIR024C 651 nt1.54□□□□□ -2.16
TY2A-FP0CX61 COA6YMR244C-A 315 nt1.54□□□□□ -2.16
TY2A-FP0CX61 YNL028WYNL028W 318 nt1.54□□□□□ -2.16
TY2A-FP0CX61 CSE2YNR010W 450 nt1.54□□□□□ -2.16
TY2A-FP0CX61 YLR419WYLR419W 4308 nt1.54□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 194.6 ms