Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 YNL054W-BYNL054W-B 5250 nt0.19□□□□□ -2.38
RPL40BP0CH09 YDR182W-AYDR182W-A 204 nt0.19□□□□□ -2.38
RPL40BP0CH09 EMC4YGL231C 573 nt0.19□□□□□ -2.38
RPL40BP0CH09 RPC10YHR143W-A 213 nt0.19□□□□□ -2.38
RPL40BP0CH09 RPS24BYIL069C 408 nt0.19□□□□□ -2.38
RPL40BP0CH09 SLI15YBR156C 2097 nt0.18□□□□□ -2.38
RPL40BP0CH09 NPR2YEL062W 1848 nt0.18□□□□□ -2.38
RPL40BP0CH09 YDR220CYDR220C 294 nt0.18□□□□□ -2.38
RPL40BP0CH09 TIM10YHR005C-A 282 nt0.18□□□□□ -2.38
RPL40BP0CH09 YHR054CYHR054C 1065 nt0.18□□□□□ -2.38
RPL40BP0CH09 YIL134C-AYIL134C-A 204 nt0.18□□□□□ -2.38
RPL40BP0CH09 YMR013C-AYMR013C-A 150 nt0.18□□□□□ -2.38
RPL40BP0CH09 YBR076C-AYBR076C-A 267 nt0.18□□□□□ -2.38
RPL40BP0CH09 YEL030C-AYEL030C-A 315 nt0.17□□□□□ -2.38
RPL40BP0CH09 YGR042WYGR042W 816 nt0.17□□□□□ -2.38
RPL40BP0CH09 CMC1YKL137W 336 nt0.17□□□□□ -2.38
RPL40BP0CH09 YLR232WYLR232W 348 nt0.17□□□□□ -2.38
RPL40BP0CH09 YBL062WYBL062W 381 nt0.17□□□□□ -2.38
RPL40BP0CH09 CHS6YJL099W 2241 nt0.17□□□□□ -2.38
RPL40BP0CH09 YLL032CYLL032C 2478 nt0.16□□□□□ -2.38
RPL40BP0CH09 YDR008CYDR008C 351 nt0.16□□□□□ -2.38
RPL40BP0CH09 RPL26BYGR034W 384 nt0.16□□□□□ -2.38
RPL40BP0CH09 YLR146W-AYLR146W-A 189 nt0.16□□□□□ -2.38
RPL40BP0CH09 ABF2YMR072W 552 nt0.16□□□□□ -2.38
RPL40BP0CH09 YHR139C-AYHR139C-A 312 nt0.15□□□□□ -2.39
RPL40BP0CH09 YSP1YHR155W 3687 nt0.14□□□□□ -2.39
RPL40BP0CH09 NPC2YDL046W 522 nt0.14□□□□□ -2.39
RPL40BP0CH09 TFB5YDR079C-A 219 nt0.14□□□□□ -2.39
RPL40BP0CH09 SBH1YER087C-B 249 nt0.14□□□□□ -2.39
RPL40BP0CH09 YGL015CYGL015C 393 nt0.14□□□□□ -2.39
RPL40BP0CH09 MRPL31YKL138C 396 nt0.14□□□□□ -2.39
RPL40BP0CH09 VAM3YOR106W 852 nt0.14□□□□□ -2.39
RPL40BP0CH09 YER138W-AYER138W-A 105 nt0.13□□□□□ -2.39
RPL40BP0CH09 YER188C-AYER188C-A 300 nt0.13□□□□□ -2.39
RPL40BP0CH09 YBL107W-AYBL107W-A 105 nt0.13□□□□□ -2.39
RPL40BP0CH09 YJL113WYJL113W 4647 nt0.13□□□□□ -2.39
RPL40BP0CH09 snR5snR5 204 nt0.12□□□□□ -2.39
RPL40BP0CH09 GPG1YGL121C 381 nt0.12□□□□□ -2.39
RPL40BP0CH09 RPL26AYLR344W 384 nt0.12□□□□□ -2.39
RPL40BP0CH09 YPR096CYPR096C 303 nt0.12□□□□□ -2.39
RPL40BP0CH09 MLP2YIL149C 5040 nt0.12□□□□□ -2.39
RPL40BP0CH09 YDR344CYDR344C 444 nt0.11□□□□□ -2.39
RPL40BP0CH09 YLR271WYLR271W 825 nt0.11□□□□□ -2.39
RPL40BP0CH09 RFX1YLR176C 2436 nt0.11□□□□□ -2.39
RPL40BP0CH09 PMP1YCR024C-A 123 nt0.1□□□□□ -2.39
RPL40BP0CH09 SPO11YHL022C 1197 nt0.1□□□□□ -2.39
RPL40BP0CH09 CDC33YOL139C 642 nt0.1□□□□□ -2.39
RPL40BP0CH09 YER076W-AYER076W-A 348 nt0.09□□□□□ -2.4
RPL40BP0CH09 YFR057WYFR057W 456 nt0.09□□□□□ -2.4
RPL40BP0CH09 CWC23YGL128C 852 nt0.09□□□□□ -2.4
RPL40BP0CH09 YGR115CYGR115C 780 nt0.09□□□□□ -2.4
RPL40BP0CH09 YGR228WYGR228W 345 nt0.09□□□□□ -2.4
RPL40BP0CH09 YIR021W-AYIR021W-A 213 nt0.09□□□□□ -2.4
RPL40BP0CH09 YLR252WYLR252W 306 nt0.09□□□□□ -2.4
RPL40BP0CH09 NOP9YJL010C 2001 nt0.09□□□□□ -2.4
RPL40BP0CH09 MLP1YKR095W 5628 nt0.09□□□□□ -2.4
RPL40BP0CH09 RAD34YDR314C 2079 nt0.09□□□□□ -2.4
RPL40BP0CH09 PET111YMR257C 2403 nt0.08□□□□□ -2.4
RPL40BP0CH09 ZIP2YGL249W 2115 nt0.07□□□□□ -2.4
RPL40BP0CH09 YOL013W-AYOL013W-A 192 nt0.07□□□□□ -2.4
RPL40BP0CH09 YJL127W-AYJL127W-A 117 nt0.06□□□□□ -2.4
RPL40BP0CH09 ILM1YJR118C 612 nt0.06□□□□□ -2.4
RPL40BP0CH09 SDS22YKL193C 1017 nt0.06□□□□□ -2.4
RPL40BP0CH09 SEC8YPR055W 3198 nt0.06□□□□□ -2.4
RPL40BP0CH09 YJR079WYJR079W 330 nt0.05□□□□□ -2.4
RPL40BP0CH09 LOA1YPR139C 903 nt0.05□□□□□ -2.4
RPL40BP0CH09 ESP1YGR098C 4893 nt0.04□□□□□ -2.4
RPL40BP0CH09 YDR269CYDR269C 324 nt0.04□□□□□ -2.4
RPL40BP0CH09 YOR108C-AYOR108C-A 210 nt0.04□□□□□ -2.4
RPL40BP0CH09 AFR1YDR085C 1863 nt0.03□□□□□ -2.4
RPL40BP0CH09 YGR164WYGR164W 336 nt0.03□□□□□ -2.4
RPL40BP0CH09 YHL042WYHL042W 453 nt0.03□□□□□ -2.4
RPL40BP0CH09 COX12YLR038C 252 nt0.03□□□□□ -2.4
RPL40BP0CH09 YPT6YLR262C 648 nt0.03□□□□□ -2.4
RPL40BP0CH09 BSC3YLR465C 309 nt0.03□□□□□ -2.4
RPL40BP0CH09 YOR248WYOR248W 303 nt0.03□□□□□ -2.4
RPL40BP0CH09 YPL044CYPL044C 549 nt0.03□□□□□ -2.4
RPL40BP0CH09 CSM4YPL200W 471 nt0.03□□□□□ -2.4
RPL40BP0CH09 VIK1YPL253C 1944 nt0.03□□□□□ -2.41
RPL40BP0CH09 YGL230CYGL230C 444 nt0.02□□□□□ -2.41
RPL40BP0CH09 POP7YBR167C 423 nt0.02□□□□□ -2.41
RPL40BP0CH09 BIG1YHR101C 1008 nt0.01□□□□□ -2.41
RPL40BP0CH09 YMR290W-AYMR290W-A 348 nt0.01□□□□□ -2.41
RPL40BP0CH09 YNR077CYNR077C 255 nt0.01□□□□□ -2.41
RPL40BP0CH09 RCN2YOR220W 798 nt0.01□□□□□ -2.41
RPL40BP0CH09 snR9snR9 187 nt0□□□□□ -2.41
RPL40BP0CH09 CUL3YGR003W 2235 nt0□□□□□ -2.41
RPL40BP0CH09 snR46snR46 197 nt0□□□□□ -2.41
RPL40BP0CH09 UBS1YBR165W 834 nt-0.01□□□□□ -2.41
RPL40BP0CH09 EFR3YMR212C 2349 nt-0.01□□□□□ -2.41
RPL40BP0CH09 INP2YMR163C 2118 nt-0.01□□□□□ -2.41
RPL40BP0CH09 FYV10YIL097W 1551 nt-0.02□□□□□ -2.41
RPL40BP0CH09 VMA21YGR105W 234 nt-0.02□□□□□ -2.41
RPL40BP0CH09 YMR254CYMR254C 309 nt-0.02□□□□□ -2.41
RPL40BP0CH09 RPB10YOR210W 213 nt-0.02□□□□□ -2.41
RPL40BP0CH09 YCL002CYCL002C 792 nt-0.02□□□□□ -2.41
RPL40BP0CH09 YJL135WYJL135W 318 nt-0.03□□□□□ -2.41
RPL40BP0CH09 YNL050CYNL050C 813 nt-0.03□□□□□ -2.41
RPL40BP0CH09 YPR039WYPR039W 336 nt-0.03□□□□□ -2.41
RPL40BP0CH09 PRP42YDR235W 1635 nt-0.03□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms