Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 NUT2YPR168W 474 nt1.08□□□□□ -2.24
BER1Q06688 REV3YPL167C 4515 nt1.08□□□□□ -2.24
BER1Q06688 SPT21YMR179W 2277 nt1.08□□□□□ -2.24
BER1Q06688 ENV11YGR071C 2583 nt1.07□□□□□ -2.24
BER1Q06688 NBL1YHR199C-A 222 nt1.07□□□□□ -2.24
BER1Q06688 snR189snR189 189 nt1.07□□□□□ -2.24
BER1Q06688 SWI6YLR182W 2412 nt1.07□□□□□ -2.24
BER1Q06688 PIP2YOR363C 2991 nt1.06□□□□□ -2.24
BER1Q06688 NUP192YJL039C 5052 nt1.06□□□□□ -2.24
BER1Q06688 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
BER1Q06688 APL3YBL037W 3078 nt1.06□□□□□ -2.24
BER1Q06688 YHR130CYHR130C 336 nt1.06□□□□□ -2.24
BER1Q06688 YMR175W-AYMR175W-A 195 nt1.06□□□□□ -2.24
BER1Q06688 RUF22RUF22 515 nt1.06□□□□□ -2.24
BER1Q06688 YBL108WYBL108W 306 nt1.06□□□□□ -2.24
BER1Q06688 GAL7YBR018C 1101 nt1.06□□□□□ -2.24
BER1Q06688 CDC31YOR257W 486 nt1.06□□□□□ -2.24
BER1Q06688 EAF1YDR359C 2949 nt1.06□□□□□ -2.24
BER1Q06688 APL1YJR005W 2103 nt1.06□□□□□ -2.24
BER1Q06688 AI5_ALPHAQ0070 1893 nt1.05□□□□□ -2.24
BER1Q06688 STB6YKL072W 2301 nt1.05□□□□□ -2.24
BER1Q06688 YDR182W-AYDR182W-A 204 nt1.05□□□□□ -2.24
BER1Q06688 tH(GUG)E1tH(GUG)E1 72 nt1.05□□□□□ -2.24
BER1Q06688 tH(GUG)E2tH(GUG)E2 72 nt1.05□□□□□ -2.24
BER1Q06688 tH(GUG)G1tH(GUG)G1 72 nt1.05□□□□□ -2.24
BER1Q06688 tH(GUG)G2tH(GUG)G2 72 nt1.05□□□□□ -2.24
BER1Q06688 tH(GUG)HtH(GUG)H 72 nt1.05□□□□□ -2.24
BER1Q06688 tH(GUG)KtH(GUG)K 72 nt1.05□□□□□ -2.24
BER1Q06688 tH(GUG)MtH(GUG)M 72 nt1.05□□□□□ -2.24
BER1Q06688 YGR045CYGR045C 363 nt1.05□□□□□ -2.24
BER1Q06688 YIL066W-AYIL066W-A 444 nt1.05□□□□□ -2.24
BER1Q06688 PHS1YJL097W 654 nt1.05□□□□□ -2.24
BER1Q06688 AIM29YKR074W 468 nt1.05□□□□□ -2.24
BER1Q06688 NST1YNL091W 3723 nt1.05□□□□□ -2.24
BER1Q06688 RFX1YLR176C 2436 nt1.05□□□□□ -2.24
BER1Q06688 YLL032CYLL032C 2478 nt1.05□□□□□ -2.24
BER1Q06688 SEC3YER008C 4011 nt1.04□□□□□ -2.24
BER1Q06688 YER087C-AYER087C-A 552 nt1.04□□□□□ -2.24
BER1Q06688 YGR290WYGR290W 444 nt1.04□□□□□ -2.24
BER1Q06688 YHR125WYHR125W 306 nt1.04□□□□□ -2.24
BER1Q06688 YNL122CYNL122C 348 nt1.04□□□□□ -2.24
BER1Q06688 YPL182CYPL182C 384 nt1.04□□□□□ -2.24
BER1Q06688 YHL037CYHL037C 402 nt1.03□□□□□ -2.24
BER1Q06688 APL2YKL135C 2181 nt1.03□□□□□ -2.25
BER1Q06688 MPT5YGL178W 2580 nt1.02□□□□□ -2.25
BER1Q06688 SPT7YBR081C 3999 nt1.02□□□□□ -2.25
BER1Q06688 YER076W-AYER076W-A 348 nt1.02□□□□□ -2.25
BER1Q06688 PRE4YFR050C 801 nt1.02□□□□□ -2.25
BER1Q06688 MRPL31YKL138C 396 nt1.02□□□□□ -2.25
BER1Q06688 CDC33YOL139C 642 nt1.02□□□□□ -2.25
BER1Q06688 NUP145YGL092W 3954 nt1.01□□□□□ -2.25
BER1Q06688 SCW11YGL028C 1629 nt1.01□□□□□ -2.25
BER1Q06688 YDR269CYDR269C 324 nt1.01□□□□□ -2.25
BER1Q06688 BI2Q0110 1272 nt1.01□□□□□ -2.25
BER1Q06688 YIL059CYIL059C 366 nt1.01□□□□□ -2.25
BER1Q06688 SDH2YLL041C 801 nt1.01□□□□□ -2.25
BER1Q06688 FYV7YLR068W 456 nt1□□□□□ -2.25
BER1Q06688 UPS1YLR193C 528 nt1□□□□□ -2.25
BER1Q06688 YNL303WYNL303W 348 nt1□□□□□ -2.25
BER1Q06688 YBR012CYBR012C 420 nt1□□□□□ -2.25
BER1Q06688 SAS3YBL052C 2496 nt1□□□□□ -2.25
BER1Q06688 LAA1YJL207C 6045 nt1□□□□□ -2.25
BER1Q06688 CYC7YEL039C 342 nt0.99□□□□□ -2.25
BER1Q06688 YOL013W-BYOL013W-B 291 nt0.99□□□□□ -2.25
BER1Q06688 ZEO1YOL109W 342 nt0.99□□□□□ -2.25
BER1Q06688 SPO75YLL005C 2607 nt0.98□□□□□ -2.25
BER1Q06688 SET3YKR029C 2256 nt0.98□□□□□ -2.25
BER1Q06688 YEL030C-AYEL030C-A 315 nt0.98□□□□□ -2.25
BER1Q06688 RPS27AYKL156W 249 nt0.98□□□□□ -2.25
BER1Q06688 YLR255CYLR255C 354 nt0.98□□□□□ -2.25
BER1Q06688 YBR221W-AYBR221W-A 105 nt0.98□□□□□ -2.25
BER1Q06688 snR54snR54 86 nt0.98□□□□□ -2.25
BER1Q06688 ROM2YLR371W 4071 nt0.98□□□□□ -2.25
BER1Q06688 MSH3YCR092C 3057 nt0.98□□□□□ -2.25
BER1Q06688 SLY1YDR189W 2001 nt0.98□□□□□ -2.25
BER1Q06688 ALY2YJL084C 3141 nt0.98□□□□□ -2.25
BER1Q06688 CLU1YMR012W 3834 nt0.97□□□□□ -2.25
BER1Q06688 TIM13YGR181W 318 nt0.97□□□□□ -2.25
BER1Q06688 YLR171WYLR171W 390 nt0.97□□□□□ -2.25
BER1Q06688 YBL071CYBL071C 309 nt0.97□□□□□ -2.25
BER1Q06688 VAM6YDL077C 3150 nt0.97□□□□□ -2.25
BER1Q06688 YJR029WYJR029W 5268 nt0.96□□□□□ -2.26
BER1Q06688 YPR137C-BYPR137C-B 5268 nt0.96□□□□□ -2.26
BER1Q06688 WIP1YDR374W-A 270 nt0.96□□□□□ -2.26
BER1Q06688 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
BER1Q06688 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
BER1Q06688 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
BER1Q06688 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
BER1Q06688 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
BER1Q06688 RPL34BYIL052C 366 nt0.96□□□□□ -2.26
BER1Q06688 YOR192C-CYOR192C-C 237 nt0.96□□□□□ -2.26
BER1Q06688 EFR3YMR212C 2349 nt0.96□□□□□ -2.26
BER1Q06688 AIM44YPL158C 2277 nt0.96□□□□□ -2.26
BER1Q06688 RRT1YBL048W 312 nt0.95□□□□□ -2.26
BER1Q06688 SLD3YGL113W 2007 nt0.94□□□□□ -2.26
BER1Q06688 ECL1YGR146C 636 nt0.94□□□□□ -2.26
BER1Q06688 YOL159C-AYOL159C-A 273 nt0.94□□□□□ -2.26
BER1Q06688 ERP4YOR016C 624 nt0.94□□□□□ -2.26
BER1Q06688 LCD1YDR499W 2244 nt0.94□□□□□ -2.26
BER1Q06688 STO1YMR125W 2586 nt0.94□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 30.9 ms