Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 SPO23YBR250W 1572 nt0.65□□□□□ -2.31
SHH3Q04487 PPN1YDR452W 2025 nt0.64□□□□□ -2.31
SHH3Q04487 GPM2YDL021W 936 nt0.64□□□□□ -2.31
SHH3Q04487 YMR153C-AYMR153C-A 336 nt0.64□□□□□ -2.31
SHH3Q04487 SEC1YDR164C 2175 nt0.63□□□□□ -2.31
SHH3Q04487 SHE9YDR393W 1371 nt0.63□□□□□ -2.31
SHH3Q04487 SLX9YGR081C 633 nt0.63□□□□□ -2.31
SHH3Q04487 RTT102YGR275W 474 nt0.63□□□□□ -2.31
SHH3Q04487 NBL1YHR199C-A 222 nt0.63□□□□□ -2.31
SHH3Q04487 SDH2YLL041C 801 nt0.63□□□□□ -2.31
SHH3Q04487 NUP157YER105C 4176 nt0.62□□□□□ -2.31
SHH3Q04487 YDR182W-AYDR182W-A 204 nt0.62□□□□□ -2.31
SHH3Q04487 YER175W-AYER175W-A 165 nt0.62□□□□□ -2.31
SHH3Q04487 RPL16AYIL133C 600 nt0.62□□□□□ -2.31
SHH3Q04487 YOR248WYOR248W 303 nt0.62□□□□□ -2.31
SHH3Q04487 SCW11YGL028C 1629 nt0.62□□□□□ -2.31
SHH3Q04487 SLD3YGL113W 2007 nt0.61□□□□□ -2.31
SHH3Q04487 YDR114CYDR114C 303 nt0.61□□□□□ -2.31
SHH3Q04487 PRP21YJL203W 843 nt0.61□□□□□ -2.31
SHH3Q04487 YBL029C-AYBL029C-A 285 nt0.61□□□□□ -2.31
SHH3Q04487 YOL029CYOL029C 606 nt0.61□□□□□ -2.31
SHH3Q04487 YBR200W-AYBR200W-A 165 nt0.61□□□□□ -2.31
SHH3Q04487 STO1YMR125W 2586 nt0.61□□□□□ -2.31
SHH3Q04487 FIG4YNL325C 2640 nt0.61□□□□□ -2.31
SHH3Q04487 YDL206WYDL206W 2289 nt0.61□□□□□ -2.31
SHH3Q04487 ENV11YGR071C 2583 nt0.6□□□□□ -2.31
SHH3Q04487 RKR1YMR247C 4689 nt0.6□□□□□ -2.31
SHH3Q04487 AIM44YPL158C 2277 nt0.59□□□□□ -2.31
SHH3Q04487 YDL073WYDL073W 2955 nt0.59□□□□□ -2.31
SHH3Q04487 YDL196WYDL196W 330 nt0.59□□□□□ -2.31
SHH3Q04487 NHP2YDL208W 471 nt0.59□□□□□ -2.31
SHH3Q04487 TMA22YJR014W 597 nt0.59□□□□□ -2.31
SHH3Q04487 YMR031W-AYMR031W-A 327 nt0.59□□□□□ -2.31
SHH3Q04487 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
SHH3Q04487 YOR199WYOR199W 330 nt0.59□□□□□ -2.31
SHH3Q04487 IRC16YPR038W 360 nt0.59□□□□□ -2.31
SHH3Q04487 YPR039WYPR039W 336 nt0.59□□□□□ -2.31
SHH3Q04487 CLU1YMR012W 3834 nt0.58□□□□□ -2.32
SHH3Q04487 OCA6YDR067C 675 nt0.58□□□□□ -2.32
SHH3Q04487 MXR1YER042W 555 nt0.58□□□□□ -2.32
SHH3Q04487 YFR009W-AYFR009W-A 258 nt0.58□□□□□ -2.32
SHH3Q04487 YAP3YHL009C 993 nt0.58□□□□□ -2.32
SHH3Q04487 YIL029CYIL029C 429 nt0.58□□□□□ -2.32
SHH3Q04487 PXA2YKL188C 2562 nt0.58□□□□□ -2.32
SHH3Q04487 Q0255Q0255 1419 nt0.57□□□□□ -2.32
SHH3Q04487 SWF1YDR126W 1011 nt0.57□□□□□ -2.32
SHH3Q04487 YDR521WYDR521W 336 nt0.57□□□□□ -2.32
SHH3Q04487 VMA21YGR105W 234 nt0.57□□□□□ -2.32
SHH3Q04487 SLY1YDR189W 2001 nt0.57□□□□□ -2.32
SHH3Q04487 ALY2YJL084C 3141 nt0.56□□□□□ -2.32
SHH3Q04487 APL2YKL135C 2181 nt0.56□□□□□ -2.32
SHH3Q04487 RIM20YOR275C 1986 nt0.56□□□□□ -2.32
SHH3Q04487 YLL032CYLL032C 2478 nt0.56□□□□□ -2.32
SHH3Q04487 YHR139C-AYHR139C-A 312 nt0.56□□□□□ -2.32
SHH3Q04487 YKL044WYKL044W 321 nt0.56□□□□□ -2.32
SHH3Q04487 UPS1YLR193C 528 nt0.56□□□□□ -2.32
SHH3Q04487 RPL32YBL092W 393 nt0.56□□□□□ -2.32
SHH3Q04487 PDE2YOR360C 1581 nt0.56□□□□□ -2.32
SHH3Q04487 LCD1YDR499W 2244 nt0.55□□□□□ -2.32
SHH3Q04487 YKL023C-AYKL023C-A 228 nt0.55□□□□□ -2.32
SHH3Q04487 YKL068W-AYKL068W-A 237 nt0.55□□□□□ -2.32
SHH3Q04487 YLR146W-AYLR146W-A 189 nt0.55□□□□□ -2.32
SHH3Q04487 CMC4YMR194C-B 222 nt0.55□□□□□ -2.32
SHH3Q04487 YER135CYER135C 393 nt0.54□□□□□ -2.32
SHH3Q04487 YPR159C-AYPR159C-A 102 nt0.54□□□□□ -2.32
SHH3Q04487 SWI6YLR182W 2412 nt0.54□□□□□ -2.32
SHH3Q04487 APQ13YJL075C 417 nt0.53□□□□□ -2.32
SHH3Q04487 MMS4YBR098W 2076 nt0.53□□□□□ -2.32
SHH3Q04487 RFX1YLR176C 2436 nt0.52□□□□□ -2.33
SHH3Q04487 YER023C-AYER023C-A 213 nt0.52□□□□□ -2.33
SHH3Q04487 YER076W-AYER076W-A 348 nt0.52□□□□□ -2.33
SHH3Q04487 HUR1YGL168W 333 nt0.52□□□□□ -2.33
SHH3Q04487 MRPL31YKL138C 396 nt0.52□□□□□ -2.33
SHH3Q04487 YML009C-AYML009C-A 327 nt0.52□□□□□ -2.33
SHH3Q04487 RRT1YBL048W 312 nt0.52□□□□□ -2.33
SHH3Q04487 YIL059CYIL059C 366 nt0.51□□□□□ -2.33
SHH3Q04487 PAM16YJL104W 450 nt0.51□□□□□ -2.33
SHH3Q04487 ILM1YJR118C 612 nt0.51□□□□□ -2.33
SHH3Q04487 YJR141WYJR141W 1044 nt0.51□□□□□ -2.33
SHH3Q04487 RCN2YOR220W 798 nt0.51□□□□□ -2.33
SHH3Q04487 YPR153WYPR153W 423 nt0.51□□□□□ -2.33
SHH3Q04487 WAR1YML076C 2835 nt0.51□□□□□ -2.33
SHH3Q04487 SLI15YBR156C 2097 nt0.5□□□□□ -2.33
SHH3Q04487 YDL016CYDL016C 303 nt0.5□□□□□ -2.33
SHH3Q04487 MET32YDR253C 576 nt0.5□□□□□ -2.33
SHH3Q04487 YGR042WYGR042W 816 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)BtT(AGU)B 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)CtT(AGU)C 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)DtT(AGU)D 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)HtT(AGU)H 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)I1tT(AGU)I1 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)I2tT(AGU)I2 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)JtT(AGU)J 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)N1tT(AGU)N1 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)N2tT(AGU)N2 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)O1tT(AGU)O1 73 nt0.5□□□□□ -2.33
SHH3Q04487 tT(AGU)O2tT(AGU)O2 73 nt0.5□□□□□ -2.33
SHH3Q04487 BER1YLR412W 825 nt0.5□□□□□ -2.33
SHH3Q04487 YML002WYML002W 2214 nt0.5□□□□□ -2.33
SHH3Q04487 PRP16YKR086W 3216 nt0.49□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 55.7 ms