Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 HHT1YBR010W 411 nt1.27□□□□□ -2.21
YNL040WP53960 RPL33BYOR234C 324 nt1.27□□□□□ -2.21
YNL040WP53960 SWI5YDR146C 2130 nt1.27□□□□□ -2.21
YNL040WP53960 IRR1YIL026C 3453 nt1.27□□□□□ -2.21
YNL040WP53960 HDA3YPR179C 1968 nt1.27□□□□□ -2.21
YNL040WP53960 DIE2YGR227W 1578 nt1.26□□□□□ -2.21
YNL040WP53960 YDR008CYDR008C 351 nt1.26□□□□□ -2.21
YNL040WP53960 YIL020C-AYIL020C-A 339 nt1.26□□□□□ -2.21
YNL040WP53960 SEC21YNL287W 2808 nt1.25□□□□□ -2.21
YNL040WP53960 TTI1YKL033W 3117 nt1.25□□□□□ -2.21
YNL040WP53960 STF2YGR008C 255 nt1.25□□□□□ -2.21
YNL040WP53960 YIL066W-AYIL066W-A 444 nt1.25□□□□□ -2.21
YNL040WP53960 YJL015CYJL015C 285 nt1.25□□□□□ -2.21
YNL040WP53960 PHS1YJL097W 654 nt1.25□□□□□ -2.21
YNL040WP53960 YKL063CYKL063C 504 nt1.25□□□□□ -2.21
YNL040WP53960 YLR140WYLR140W 327 nt1.25□□□□□ -2.21
YNL040WP53960 YLR222C-AYLR222C-A 231 nt1.25□□□□□ -2.21
YNL040WP53960 YPL182CYPL182C 384 nt1.25□□□□□ -2.21
YNL040WP53960 PMD1YER132C 5262 nt1.24□□□□□ -2.21
YNL040WP53960 MSH5YDL154W 2706 nt1.24□□□□□ -2.21
YNL040WP53960 WIP1YDR374W-A 270 nt1.24□□□□□ -2.21
YNL040WP53960 SDH7YDR511W 402 nt1.24□□□□□ -2.21
YNL040WP53960 YLR264C-AYLR264C-A 117 nt1.24□□□□□ -2.21
YNL040WP53960 YNL324WYNL324W 396 nt1.24□□□□□ -2.21
YNL040WP53960 PRM3YPL192C 402 nt1.24□□□□□ -2.21
YNL040WP53960 ZIP1YDR285W 2628 nt1.24□□□□□ -2.21
YNL040WP53960 ZRG17YNR039C 1818 nt1.24□□□□□ -2.21
YNL040WP53960 YNL284C-BYNL284C-B 5268 nt1.23□□□□□ -2.21
YNL040WP53960 SRP14YDL092W 441 nt1.23□□□□□ -2.21
YNL040WP53960 YDR003W-AYDR003W-A 123 nt1.23□□□□□ -2.21
YNL040WP53960 YDR114CYDR114C 303 nt1.23□□□□□ -2.21
YNL040WP53960 YGR042WYGR042W 816 nt1.23□□□□□ -2.21
YNL040WP53960 EMC5YIL027C 426 nt1.23□□□□□ -2.21
YNL040WP53960 YJL022WYJL022W 309 nt1.23□□□□□ -2.21
YNL040WP53960 COF1YLL050C 432 nt1.23□□□□□ -2.21
YNL040WP53960 MLH3YPL164C 2148 nt1.22□□□□□ -2.21
YNL040WP53960 BEM2YER155C 6504 nt1.22□□□□□ -2.21
YNL040WP53960 VAR1Q0140 1197 nt1.22□□□□□ -2.21
YNL040WP53960 YHL009W-AYHL009W-A 1242 nt1.22□□□□□ -2.21
YNL040WP53960 HCH1YNL281W 462 nt1.22□□□□□ -2.21
YNL040WP53960 MRPL50YNR022C 420 nt1.22□□□□□ -2.21
YNL040WP53960 PXA2YKL188C 2562 nt1.21□□□□□ -2.22
YNL040WP53960 ALK1YGL021W 2283 nt1.21□□□□□ -2.22
YNL040WP53960 YDL011CYDL011C 324 nt1.21□□□□□ -2.22
YNL040WP53960 RPS24BYIL069C 408 nt1.21□□□□□ -2.22
YNL040WP53960 YOR376WYOR376W 369 nt1.21□□□□□ -2.22
YNL040WP53960 MVP1YMR004W 1536 nt1.2□□□□□ -2.22
YNL040WP53960 YLL054CYLL054C 2532 nt1.2□□□□□ -2.22
YNL040WP53960 APL2YKL135C 2181 nt1.2□□□□□ -2.22
YNL040WP53960 TIM13YGR181W 318 nt1.2□□□□□ -2.22
YNL040WP53960 YLR146W-AYLR146W-A 189 nt1.2□□□□□ -2.22
YNL040WP53960 YOP1YPR028W 543 nt1.2□□□□□ -2.22
YNL040WP53960 SPO23YBR250W 1572 nt1.2□□□□□ -2.22
YNL040WP53960 AZF1YOR113W 2745 nt1.2□□□□□ -2.22
YNL040WP53960 TRM732YMR259C 4263 nt1.2□□□□□ -2.22
YNL040WP53960 SWI6YLR182W 2412 nt1.19□□□□□ -2.22
YNL040WP53960 UFD2YDL190C 2886 nt1.19□□□□□ -2.22
YNL040WP53960 EST2YLR318W 2655 nt1.19□□□□□ -2.22
YNL040WP53960 VPS55YJR044C 423 nt1.19□□□□□ -2.22
YNL040WP53960 RPS27AYKL156W 249 nt1.19□□□□□ -2.22
YNL040WP53960 SMC4YLR086W 4257 nt1.19□□□□□ -2.22
YNL040WP53960 RAD50YNL250W 3939 nt1.18□□□□□ -2.22
YNL040WP53960 IML1YJR138W 4755 nt1.18□□□□□ -2.22
YNL040WP53960 SWF1YDR126W 1011 nt1.18□□□□□ -2.22
YNL040WP53960 AGA2YGL032C 264 nt1.18□□□□□ -2.22
YNL040WP53960 YJL020W-AYJL020W-A 258 nt1.18□□□□□ -2.22
YNL040WP53960 YAR047CYAR047C 321 nt1.18□□□□□ -2.22
YNL040WP53960 YML003WYML003W 873 nt1.18□□□□□ -2.22
YNL040WP53960 YSY6YBR162W-A 198 nt1.18□□□□□ -2.22
YNL040WP53960 RAD9YDR217C 3930 nt1.18□□□□□ -2.22
YNL040WP53960 DGR2YKL121W 2559 nt1.18□□□□□ -2.22
YNL040WP53960 LYS14YDR034C 2373 nt1.18□□□□□ -2.22
YNL040WP53960 SPO75YLL005C 2607 nt1.18□□□□□ -2.22
YNL040WP53960 SIP4YJL089W 2490 nt1.17□□□□□ -2.22
YNL040WP53960 MDS3YGL197W 4464 nt1.17□□□□□ -2.22
YNL040WP53960 CYC7YEL039C 342 nt1.17□□□□□ -2.22
YNL040WP53960 YER079WYER079W 633 nt1.17□□□□□ -2.22
YNL040WP53960 PIP2YOR363C 2991 nt1.17□□□□□ -2.22
YNL040WP53960 SGO1YOR073W 1773 nt1.16□□□□□ -2.22
YNL040WP53960 VAM6YDL077C 3150 nt1.16□□□□□ -2.22
YNL040WP53960 YAP6YDR259C 1152 nt1.16□□□□□ -2.22
YNL040WP53960 PAU2YEL049W 363 nt1.16□□□□□ -2.22
YNL040WP53960 RTR1YER139C 681 nt1.16□□□□□ -2.22
YNL040WP53960 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
YNL040WP53960 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
YNL040WP53960 RPL26AYLR344W 384 nt1.16□□□□□ -2.22
YNL040WP53960 YLR434CYLR434C 384 nt1.16□□□□□ -2.22
YNL040WP53960 TIM18YOR297C 579 nt1.16□□□□□ -2.22
YNL040WP53960 YPL185WYPL185W 396 nt1.16□□□□□ -2.22
YNL040WP53960 KAP122YGL016W 3246 nt1.16□□□□□ -2.22
YNL040WP53960 SCC2YDR180W 4482 nt1.15□□□□□ -2.22
YNL040WP53960 RPL40BYKR094C 387 nt1.15□□□□□ -2.23
YNL040WP53960 RPL9BYNL067W 576 nt1.15□□□□□ -2.23
YNL040WP53960 LEE1YPL054W 906 nt1.15□□□□□ -2.23
YNL040WP53960 YBR285WYBR285W 435 nt1.15□□□□□ -2.23
YNL040WP53960 PCF11YDR228C 1881 nt1.15□□□□□ -2.23
YNL040WP53960 MSN5YDR335W 3675 nt1.14□□□□□ -2.23
YNL040WP53960 DOP1YDR141C 5097 nt1.14□□□□□ -2.23
YNL040WP53960 PAC1YOR269W 1485 nt1.14□□□□□ -2.23
YNL040WP53960 YDR169C-AYDR169C-A 150 nt1.14□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 100.2 ms