Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 COF1YLL050C 432 nt1.07□□□□□ -2.24
LSM4P40070 YBR032WYBR032W 303 nt1.07□□□□□ -2.24
LSM4P40070 MSH3YCR092C 3057 nt1.07□□□□□ -2.24
LSM4P40070 SMY1YKL079W 1971 nt1.07□□□□□ -2.24
LSM4P40070 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
LSM4P40070 RLM1YPL089C 2031 nt1.06□□□□□ -2.24
LSM4P40070 MSN5YDR335W 3675 nt1.06□□□□□ -2.24
LSM4P40070 YDL152WYDL152W 366 nt1.06□□□□□ -2.24
LSM4P40070 CRG1YHR209W 876 nt1.06□□□□□ -2.24
LSM4P40070 URM1YIL008W 300 nt1.06□□□□□ -2.24
LSM4P40070 YJR157WYJR157W 363 nt1.06□□□□□ -2.24
LSM4P40070 YMR153C-AYMR153C-A 336 nt1.06□□□□□ -2.24
LSM4P40070 ZEO1YOL109W 342 nt1.06□□□□□ -2.24
LSM4P40070 YCK3YER123W 1575 nt1.05□□□□□ -2.24
LSM4P40070 GDS1YOR355W 1569 nt1.05□□□□□ -2.24
LSM4P40070 YBR184WYBR184W 1572 nt1.05□□□□□ -2.24
LSM4P40070 RPL34BYIL052C 366 nt1.05□□□□□ -2.24
LSM4P40070 RUF22RUF22 515 nt1.05□□□□□ -2.24
LSM4P40070 ERP4YOR016C 624 nt1.05□□□□□ -2.24
LSM4P40070 YPR099CYPR099C 357 nt1.05□□□□□ -2.24
LSM4P40070 COG4YPR105C 2586 nt1.05□□□□□ -2.24
LSM4P40070 MDS3YGL197W 4464 nt1.05□□□□□ -2.24
LSM4P40070 MSH5YDL154W 2706 nt1.05□□□□□ -2.24
LSM4P40070 IRR1YIL026C 3453 nt1.04□□□□□ -2.24
LSM4P40070 YKL063CYKL063C 504 nt1.04□□□□□ -2.24
LSM4P40070 YLR222C-AYLR222C-A 231 nt1.04□□□□□ -2.24
LSM4P40070 YOR192C-CYOR192C-C 237 nt1.04□□□□□ -2.24
LSM4P40070 AZF1YOR113W 2745 nt1.04□□□□□ -2.24
LSM4P40070 APL1YJR005W 2103 nt1.04□□□□□ -2.24
LSM4P40070 MKT1YNL085W 2493 nt1.04□□□□□ -2.24
LSM4P40070 DGR2YKL121W 2559 nt1.03□□□□□ -2.24
LSM4P40070 SNF5YBR289W 2718 nt1.03□□□□□ -2.24
LSM4P40070 SAC3YDR159W 3906 nt1.03□□□□□ -2.24
LSM4P40070 PAN3YKL025C 2040 nt1.03□□□□□ -2.24
LSM4P40070 YER076W-AYER076W-A 348 nt1.03□□□□□ -2.24
LSM4P40070 YER087C-AYER087C-A 552 nt1.03□□□□□ -2.24
LSM4P40070 YLR406C-AYLR406C-A 150 nt1.03□□□□□ -2.24
LSM4P40070 YML009C-AYML009C-A 327 nt1.03□□□□□ -2.24
LSM4P40070 CGI121YML036W 546 nt1.03□□□□□ -2.24
LSM4P40070 UBC7YMR022W 498 nt1.03□□□□□ -2.24
LSM4P40070 HCH1YNL281W 462 nt1.03□□□□□ -2.24
LSM4P40070 RPL33BYOR234C 324 nt1.03□□□□□ -2.24
LSM4P40070 PRM3YPL192C 402 nt1.03□□□□□ -2.24
LSM4P40070 PAM16YJL104W 450 nt1.02□□□□□ -2.25
LSM4P40070 IML1YJR138W 4755 nt1.02□□□□□ -2.25
LSM4P40070 YKL183C-AYKL183C-A 213 nt1.02□□□□□ -2.25
LSM4P40070 YLR264C-AYLR264C-A 117 nt1.02□□□□□ -2.25
LSM4P40070 MVP1YMR004W 1536 nt1.02□□□□□ -2.25
LSM4P40070 YNL324WYNL324W 396 nt1.02□□□□□ -2.25
LSM4P40070 YJR003CYJR003C 1560 nt1.01□□□□□ -2.25
LSM4P40070 CBS1YDL069C 690 nt1.01□□□□□ -2.25
LSM4P40070 VAR1Q0140 1197 nt1.01□□□□□ -2.25
LSM4P40070 YGL239CYGL239C 315 nt1.01□□□□□ -2.25
LSM4P40070 RPL42BYHR141C 321 nt1.01□□□□□ -2.25
LSM4P40070 RPL42AYNL162W 321 nt1.01□□□□□ -2.25
LSM4P40070 DIE2YGR227W 1578 nt1□□□□□ -2.25
LSM4P40070 TOF2YKR010C 2316 nt1□□□□□ -2.25
LSM4P40070 YDR008CYDR008C 351 nt1□□□□□ -2.25
LSM4P40070 YDR509WYDR509W 348 nt1□□□□□ -2.25
LSM4P40070 YGR042WYGR042W 816 nt1□□□□□ -2.25
LSM4P40070 YHR028W-AYHR028W-A 321 nt1□□□□□ -2.25
LSM4P40070 ABM1YJR108W 372 nt1□□□□□ -2.25
LSM4P40070 YLR287CYLR287C 1068 nt1□□□□□ -2.25
LSM4P40070 YNL114CYNL114C 372 nt1□□□□□ -2.25
LSM4P40070 YBL071CYBL071C 309 nt1□□□□□ -2.25
LSM4P40070 YOL014WYOL014W 375 nt1□□□□□ -2.25
LSM4P40070 YPR063CYPR063C 423 nt1□□□□□ -2.25
LSM4P40070 TRM732YMR259C 4263 nt1□□□□□ -2.25
LSM4P40070 LAA1YJL207C 6045 nt0.99□□□□□ -2.25
LSM4P40070 YDR114CYDR114C 303 nt0.99□□□□□ -2.25
LSM4P40070 SDH7YDR511W 402 nt0.99□□□□□ -2.25
LSM4P40070 YBL073WYBL073W 312 nt0.99□□□□□ -2.25
LSM4P40070 RPL32YBL092W 393 nt0.99□□□□□ -2.25
LSM4P40070 MRPL50YNR022C 420 nt0.99□□□□□ -2.25
LSM4P40070 YPL182CYPL182C 384 nt0.99□□□□□ -2.25
LSM4P40070 YCL046WYCL046W 324 nt0.99□□□□□ -2.25
LSM4P40070 SIP4YJL089W 2490 nt0.99□□□□□ -2.25
LSM4P40070 YJR029WYJR029W 5268 nt0.99□□□□□ -2.25
LSM4P40070 YPR137C-BYPR137C-B 5268 nt0.99□□□□□ -2.25
LSM4P40070 SMC4YLR086W 4257 nt0.99□□□□□ -2.25
LSM4P40070 CLU1YMR012W 3834 nt0.98□□□□□ -2.25
LSM4P40070 UFD2YDL190C 2886 nt0.98□□□□□ -2.25
LSM4P40070 WIP1YDR374W-A 270 nt0.98□□□□□ -2.25
LSM4P40070 AGA2YGL032C 264 nt0.98□□□□□ -2.25
LSM4P40070 YMR175W-AYMR175W-A 195 nt0.98□□□□□ -2.25
LSM4P40070 YOR376WYOR376W 369 nt0.98□□□□□ -2.25
LSM4P40070 OSH6YKR003W 1347 nt0.97□□□□□ -2.25
LSM4P40070 YGR265WYGR265W 411 nt0.97□□□□□ -2.25
LSM4P40070 YHL009W-AYHL009W-A 1242 nt0.97□□□□□ -2.25
LSM4P40070 EMC5YIL027C 426 nt0.97□□□□□ -2.25
LSM4P40070 YIL066W-AYIL066W-A 444 nt0.97□□□□□ -2.25
LSM4P40070 RPS24BYIL069C 408 nt0.97□□□□□ -2.25
LSM4P40070 HHT1YBR010W 411 nt0.97□□□□□ -2.25
LSM4P40070 HDA3YPR179C 1968 nt0.97□□□□□ -2.25
LSM4P40070 YER079WYER079W 633 nt0.96□□□□□ -2.26
LSM4P40070 FMP23YBR047W 528 nt0.96□□□□□ -2.26
LSM4P40070 NUP188YML103C 4968 nt0.96□□□□□ -2.26
LSM4P40070 SPO75YLL005C 2607 nt0.95□□□□□ -2.26
LSM4P40070 MUK1YPL070W 1839 nt0.95□□□□□ -2.26
LSM4P40070 YDL011CYDL011C 324 nt0.95□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 44.7 ms