Protein–RNA interactions for Protein: P33417

IXR1, Intrastrand cross-link recognition protein, yeastyeast

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IXR1P33417 RCY1YJL204C 2523 nt3.29□□□□□ -1.88
IXR1P33417 SCH9YHR205W 2475 nt3.29□□□□□ -1.88
IXR1P33417 GIS1YDR096W 2685 nt3.28□□□□□ -1.88
IXR1P33417 YHR073W-AYHR073W-A 177 nt3.28□□□□□ -1.88
IXR1P33417 RPL42BYHR141C 321 nt3.28□□□□□ -1.88
IXR1P33417 RPL42AYNL162W 321 nt3.28□□□□□ -1.88
IXR1P33417 FUN30YAL019W 3396 nt3.28□□□□□ -1.88
IXR1P33417 FRE2YKL220C 2136 nt3.28□□□□□ -1.89
IXR1P33417 PSK1YAL017W 4071 nt3.28□□□□□ -1.89
IXR1P33417 MDM1YML104C 3384 nt3.28□□□□□ -1.89
IXR1P33417 PBY1YBR094W 2262 nt3.27□□□□□ -1.89
IXR1P33417 SWI1YPL016W 3945 nt3.27□□□□□ -1.89
IXR1P33417 YKU80YMR106C 1890 nt3.27□□□□□ -1.89
IXR1P33417 YDL242WYDL242W 354 nt3.27□□□□□ -1.89
IXR1P33417 YOR019WYOR019W 2193 nt3.27□□□□□ -1.89
IXR1P33417 LYS14YDR034C 2373 nt3.26□□□□□ -1.89
IXR1P33417 DSE4YNR067C 3354 nt3.26□□□□□ -1.89
IXR1P33417 YCR087C-AYCR087C-A 462 nt3.26□□□□□ -1.89
IXR1P33417 RPL31AYDL075W 342 nt3.26□□□□□ -1.89
IXR1P33417 TAE2YPL009C 3117 nt3.26□□□□□ -1.89
IXR1P33417 MMS22YLR320W 4365 nt3.26□□□□□ -1.89
IXR1P33417 UTP14YML093W 2700 nt3.25□□□□□ -1.89
IXR1P33417 STU1YBL034C 4542 nt3.25□□□□□ -1.89
IXR1P33417 CRM1YGR218W 3255 nt3.25□□□□□ -1.89
IXR1P33417 UBP14YBR058C 2346 nt3.25□□□□□ -1.89
IXR1P33417 MNL2YLR057W 2550 nt3.24□□□□□ -1.89
IXR1P33417 SWI5YDR146C 2130 nt3.24□□□□□ -1.89
IXR1P33417 RPS21AYKR057W 264 nt3.24□□□□□ -1.89
IXR1P33417 YDR186CYDR186C 2634 nt3.24□□□□□ -1.89
IXR1P33417 HEF3YNL014W 3135 nt3.24□□□□□ -1.89
IXR1P33417 STB4YMR019W 2850 nt3.23□□□□□ -1.89
IXR1P33417 REV3YPL167C 4515 nt3.23□□□□□ -1.89
IXR1P33417 PIP2YOR363C 2991 nt3.23□□□□□ -1.89
IXR1P33417 AFI1YOR129C 2682 nt3.22□□□□□ -1.89
IXR1P33417 SPO22YIL073C 2928 nt3.22□□□□□ -1.89
IXR1P33417 tW(CCA)G1tW(CCA)G1 72 nt3.22□□□□□ -1.89
IXR1P33417 tW(CCA)G2tW(CCA)G2 72 nt3.22□□□□□ -1.89
IXR1P33417 tW(CCA)JtW(CCA)J 72 nt3.22□□□□□ -1.89
IXR1P33417 tW(CCA)KtW(CCA)K 72 nt3.22□□□□□ -1.89
IXR1P33417 tW(CCA)MtW(CCA)M 72 nt3.22□□□□□ -1.89
IXR1P33417 tW(CCA)PtW(CCA)P 72 nt3.22□□□□□ -1.89
IXR1P33417 MTR4YJL050W 3222 nt3.22□□□□□ -1.89
IXR1P33417 TFC1YBR123C 1950 nt3.21□□□□□ -1.89
IXR1P33417 HOS4YIL112W 3252 nt3.21□□□□□ -1.9
IXR1P33417 MIT1YEL007W 2001 nt3.21□□□□□ -1.9
IXR1P33417 RGR1YLR071C 3249 nt3.21□□□□□ -1.9
IXR1P33417 YEL025CYEL025C 3567 nt3.21□□□□□ -1.9
IXR1P33417 DNA2YHR164C 4569 nt3.2□□□□□ -1.9
IXR1P33417 NMD2YHR077C 3270 nt3.2□□□□□ -1.9
IXR1P33417 RGA2YDR379W 3030 nt3.19□□□□□ -1.9
IXR1P33417 YNL144CYNL144C 2223 nt3.19□□□□□ -1.9
IXR1P33417 RAD34YDR314C 2079 nt3.19□□□□□ -1.9
IXR1P33417 ZRG8YER033C 3231 nt3.19□□□□□ -1.9
IXR1P33417 NAM7YMR080C 2916 nt3.19□□□□□ -1.9
IXR1P33417 DUG2YBR281C 2637 nt3.19□□□□□ -1.9
IXR1P33417 EDS1YBR033W 2760 nt3.18□□□□□ -1.9
IXR1P33417 NET1YJL076W 3570 nt3.18□□□□□ -1.9
IXR1P33417 GCN1YGL195W 8019 nt3.18□□□□□ -1.9
IXR1P33417 MAK21YDR060W 3078 nt3.18□□□□□ -1.9
IXR1P33417 CRS5YOR031W 210 nt3.18□□□□□ -1.9
IXR1P33417 ILS1YBL076C 3219 nt3.18□□□□□ -1.9
IXR1P33417 VPS16YPL045W 2397 nt3.18□□□□□ -1.9
IXR1P33417 KAP104YBR017C 2757 nt3.17□□□□□ -1.9
IXR1P33417 MSB2YGR014W 3921 nt3.17□□□□□ -1.9
IXR1P33417 SLD3YGL113W 2007 nt3.17□□□□□ -1.9
IXR1P33417 RPS30BYOR182C 192 nt3.17□□□□□ -1.9
IXR1P33417 RAX2YLR084C 3663 nt3.16□□□□□ -1.9
IXR1P33417 SPO14YKR031C 5052 nt3.15□□□□□ -1.9
IXR1P33417 PAU8YAL068C 363 nt3.15□□□□□ -1.91
IXR1P33417 PAU18YLL064C 363 nt3.15□□□□□ -1.91
IXR1P33417 COX12YLR038C 252 nt3.15□□□□□ -1.91
IXR1P33417 PAU6YNR076W 363 nt3.15□□□□□ -1.91
IXR1P33417 PAU20YOL161C 363 nt3.15□□□□□ -1.91
IXR1P33417 SLM1YIL105C 2061 nt3.15□□□□□ -1.91
IXR1P33417 CHS6YJL099W 2241 nt3.15□□□□□ -1.91
IXR1P33417 GCV2YMR189W 3105 nt3.14□□□□□ -1.91
IXR1P33417 YCR038W-AYCR038W-A 126 nt3.14□□□□□ -1.91
IXR1P33417 YMR242W-AYMR242W-A 90 nt3.14□□□□□ -1.91
IXR1P33417 IFH1YLR223C 3258 nt3.14□□□□□ -1.91
IXR1P33417 CHS2YBR038W 2892 nt3.14□□□□□ -1.91
IXR1P33417 RRP6YOR001W 2202 nt3.13□□□□□ -1.91
IXR1P33417 XRS2YDR369C 2565 nt3.13□□□□□ -1.91
IXR1P33417 RCO1YMR075W 2055 nt3.13□□□□□ -1.91
IXR1P33417 SDC25YLL016W 3147 nt3.13□□□□□ -1.91
IXR1P33417 DRS2YAL026C 4068 nt3.13□□□□□ -1.91
IXR1P33417 YFL065CYFL065C 309 nt3.13□□□□□ -1.91
IXR1P33417 SNC1YAL030W 354 nt3.13□□□□□ -1.91
IXR1P33417 YPR203WYPR203W 309 nt3.13□□□□□ -1.91
IXR1P33417 YIL169CYIL169C 2988 nt3.13□□□□□ -1.91
IXR1P33417 ZIP1YDR285W 2628 nt3.12□□□□□ -1.91
IXR1P33417 YPL216WYPL216W 3309 nt3.12□□□□□ -1.91
IXR1P33417 snR62snR62 100 nt3.12□□□□□ -1.91
IXR1P33417 SPT4YGR063C 309 nt3.12□□□□□ -1.91
IXR1P33417 YLR154C-HYLR154C-H 132 nt3.12□□□□□ -1.91
IXR1P33417 YLR156C-AYLR156C-A 132 nt3.12□□□□□ -1.91
IXR1P33417 YLR157C-CYLR157C-C 132 nt3.12□□□□□ -1.91
IXR1P33417 YLR159C-AYLR159C-A 132 nt3.12□□□□□ -1.91
IXR1P33417 YOR108C-AYOR108C-A 210 nt3.12□□□□□ -1.91
IXR1P33417 SBE22YHR103W 2559 nt3.12□□□□□ -1.91
IXR1P33417 PRP5YBR237W 2550 nt3.12□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 56.1 ms