Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 Z98882.1-201ENST00000622160 2253 ntBASIC19.64■□□□□ 0.73
SNAP47Q5SQN1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SNAP47Q5SQN1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 KRT17P3-201ENST00000420566 1262 ntBASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNAP47Q5SQN1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 AL356652.1-201ENST00000615962 565 ntBASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 FAM197Y4-202ENST00000622692 608 ntBASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNAP47Q5SQN1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 C1QBPP2-201ENST00000528754 825 ntBASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNAP47Q5SQN1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 AC233263.1-201ENST00000578059 224 ntBASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SNAP47Q5SQN1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNAP47Q5SQN1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms