Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 YLR264C-AYLR264C-A 117 nt1.67□□□□□ -2.14
RUP1Q12242 YBL071CYBL071C 309 nt1.67□□□□□ -2.14
RUP1Q12242 YOL159C-AYOL159C-A 273 nt1.67□□□□□ -2.14
RUP1Q12242 FYV12YOR183W 390 nt1.67□□□□□ -2.14
RUP1Q12242 GNT1YOR320C 1476 nt1.67□□□□□ -2.14
RUP1Q12242 YGR042WYGR042W 816 nt1.66□□□□□ -2.14
RUP1Q12242 YHR028W-AYHR028W-A 321 nt1.66□□□□□ -2.14
RUP1Q12242 PAU18YLL064C 363 nt1.66□□□□□ -2.14
RUP1Q12242 YLR255CYLR255C 354 nt1.66□□□□□ -2.14
RUP1Q12242 YNL114CYNL114C 372 nt1.66□□□□□ -2.14
RUP1Q12242 PAU6YNR076W 363 nt1.66□□□□□ -2.14
RUP1Q12242 RPL31AYDL075W 342 nt1.65□□□□□ -2.15
RUP1Q12242 WIP1YDR374W-A 270 nt1.65□□□□□ -2.15
RUP1Q12242 RPL32YBL092W 393 nt1.65□□□□□ -2.15
RUP1Q12242 OSH6YKR003W 1347 nt1.65□□□□□ -2.15
RUP1Q12242 YGR250CYGR250C 2346 nt1.65□□□□□ -2.15
RUP1Q12242 YDR114CYDR114C 303 nt1.64□□□□□ -2.15
RUP1Q12242 SDH7YDR511W 402 nt1.64□□□□□ -2.15
RUP1Q12242 YGL239CYGL239C 315 nt1.64□□□□□ -2.15
RUP1Q12242 PHS1YJL097W 654 nt1.64□□□□□ -2.15
RUP1Q12242 YNL324WYNL324W 396 nt1.64□□□□□ -2.15
RUP1Q12242 YBP1YBR216C 2025 nt1.64□□□□□ -2.15
RUP1Q12242 BRR2YER172C 6492 nt1.64□□□□□ -2.15
RUP1Q12242 DIE2YGR227W 1578 nt1.64□□□□□ -2.15
RUP1Q12242 TOF2YKR010C 2316 nt1.63□□□□□ -2.15
RUP1Q12242 YJR098CYJR098C 1971 nt1.63□□□□□ -2.15
RUP1Q12242 SEC63YOR254C 1992 nt1.63□□□□□ -2.15
RUP1Q12242 RTT102YGR275W 474 nt1.63□□□□□ -2.15
RUP1Q12242 YIL066W-AYIL066W-A 444 nt1.63□□□□□ -2.15
RUP1Q12242 GUP1YGL084C 1683 nt1.63□□□□□ -2.15
RUP1Q12242 RKM1YPL208W 1752 nt1.62□□□□□ -2.15
RUP1Q12242 MEC1YBR136W 7107 nt1.62□□□□□ -2.15
RUP1Q12242 PAU3YCR104W 375 nt1.62□□□□□ -2.15
RUP1Q12242 YDR008CYDR008C 351 nt1.62□□□□□ -2.15
RUP1Q12242 SSK2YNR031C 4740 nt1.62□□□□□ -2.15
RUP1Q12242 MDM20YOL076W 2391 nt1.62□□□□□ -2.15
RUP1Q12242 TBS1YBR150C 3285 nt1.61□□□□□ -2.15
RUP1Q12242 YKL063CYKL063C 504 nt1.61□□□□□ -2.15
RUP1Q12242 TRX1YLR043C 312 nt1.61□□□□□ -2.15
RUP1Q12242 HCH1YNL281W 462 nt1.61□□□□□ -2.15
RUP1Q12242 TFC8YPL007C 1767 nt1.61□□□□□ -2.15
RUP1Q12242 CFT1YDR301W 4074 nt1.61□□□□□ -2.15
RUP1Q12242 SWI5YDR146C 2130 nt1.61□□□□□ -2.15
RUP1Q12242 PMD1YER132C 5262 nt1.61□□□□□ -2.15
RUP1Q12242 IRE1YHR079C 3348 nt1.61□□□□□ -2.15
RUP1Q12242 RLM1YPL089C 2031 nt1.61□□□□□ -2.15
RUP1Q12242 YGR109W-BYGR109W-B 4644 nt1.6□□□□□ -2.15
RUP1Q12242 IRA1YBR140C 9279 nt1.6□□□□□ -2.15
RUP1Q12242 SRP14YDL092W 441 nt1.6□□□□□ -2.15
RUP1Q12242 ABM1YJR108W 372 nt1.6□□□□□ -2.15
RUP1Q12242 MRPL50YNR022C 420 nt1.6□□□□□ -2.15
RUP1Q12242 IRR1YIL026C 3453 nt1.6□□□□□ -2.15
RUP1Q12242 HDA3YPR179C 1968 nt1.59□□□□□ -2.15
RUP1Q12242 CCH1YGR217W 6120 nt1.59□□□□□ -2.15
RUP1Q12242 PKH3YDR466W 2697 nt1.59□□□□□ -2.15
RUP1Q12242 SEY1YOR165W 2331 nt1.59□□□□□ -2.15
RUP1Q12242 YER079WYER079W 633 nt1.59□□□□□ -2.15
RUP1Q12242 AGA2YGL032C 264 nt1.59□□□□□ -2.15
RUP1Q12242 RPS24BYIL069C 408 nt1.59□□□□□ -2.15
RUP1Q12242 FMP23YBR047W 528 nt1.59□□□□□ -2.15
RUP1Q12242 CTR9YOL145C 3234 nt1.58□□□□□ -2.16
RUP1Q12242 FIG2YCR089W 4830 nt1.58□□□□□ -2.16
RUP1Q12242 SWF1YDR126W 1011 nt1.58□□□□□ -2.16
RUP1Q12242 PRE4YFR050C 801 nt1.58□□□□□ -2.16
RUP1Q12242 YPL182CYPL182C 384 nt1.58□□□□□ -2.16
RUP1Q12242 MSH5YDL154W 2706 nt1.57□□□□□ -2.16
RUP1Q12242 YDR003W-AYDR003W-A 123 nt1.57□□□□□ -2.16
RUP1Q12242 YHL009W-AYHL009W-A 1242 nt1.57□□□□□ -2.16
RUP1Q12242 YLR434CYLR434C 384 nt1.57□□□□□ -2.16
RUP1Q12242 RRT1YBL048W 312 nt1.57□□□□□ -2.16
RUP1Q12242 YOL159CYOL159C 516 nt1.57□□□□□ -2.16
RUP1Q12242 YOR146WYOR146W 306 nt1.57□□□□□ -2.16
RUP1Q12242 LEE1YPL054W 906 nt1.57□□□□□ -2.16
RUP1Q12242 SAR1YPL218W 573 nt1.57□□□□□ -2.16
RUP1Q12242 PXA2YKL188C 2562 nt1.57□□□□□ -2.16
RUP1Q12242 ZRG17YNR039C 1818 nt1.56□□□□□ -2.16
RUP1Q12242 YLR422WYLR422W 5799 nt1.56□□□□□ -2.16
RUP1Q12242 COA6YMR244C-A 315 nt1.56□□□□□ -2.16
RUP1Q12242 YDL011CYDL011C 324 nt1.55□□□□□ -2.16
RUP1Q12242 YDR269CYDR269C 324 nt1.55□□□□□ -2.16
RUP1Q12242 YGR265WYGR265W 411 nt1.55□□□□□ -2.16
RUP1Q12242 RPL26AYLR344W 384 nt1.55□□□□□ -2.16
RUP1Q12242 YBR174CYBR174C 315 nt1.55□□□□□ -2.16
RUP1Q12242 SBE22YHR103W 2559 nt1.55□□□□□ -2.16
RUP1Q12242 NOP53YPL146C 1368 nt1.55□□□□□ -2.16
RUP1Q12242 TRM3YDL112W 4311 nt1.54□□□□□ -2.16
RUP1Q12242 TIM13YGR181W 318 nt1.54□□□□□ -2.16
RUP1Q12242 YBL073WYBL073W 312 nt1.54□□□□□ -2.16
RUP1Q12242 YOP1YPR028W 543 nt1.54□□□□□ -2.16
RUP1Q12242 FRK1YPL141C 2598 nt1.54□□□□□ -2.16
RUP1Q12242 TDA9YML081W 3756 nt1.54□□□□□ -2.16
RUP1Q12242 YAP6YDR259C 1152 nt1.53□□□□□ -2.16
RUP1Q12242 YOR293C-AYOR293C-A 150 nt1.53□□□□□ -2.16
RUP1Q12242 YBR285WYBR285W 435 nt1.53□□□□□ -2.16
RUP1Q12242 PET127YOR017W 2403 nt1.52□□□□□ -2.17
RUP1Q12242 MDS3YGL197W 4464 nt1.52□□□□□ -2.17
RUP1Q12242 YHR138CYHR138C 345 nt1.52□□□□□ -2.17
RUP1Q12242 YJL020W-AYJL020W-A 258 nt1.52□□□□□ -2.17
RUP1Q12242 YAR047CYAR047C 321 nt1.52□□□□□ -2.17
RUP1Q12242 YMR141W-AYMR141W-A 225 nt1.52□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 37.8 ms