Protein–RNA interactions for Protein: P54999

SMX3, Small nuclear ribonucleoprotein F, yeastyeast

Predicted RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMX3P54999 SDH6YDR379C-A 240 nt2.36□□□□□ -2.03
SMX3P54999 YLR146W-AYLR146W-A 189 nt2.36□□□□□ -2.03
SMX3P54999 YBR277CYBR277C 402 nt2.36□□□□□ -2.03
SMX3P54999 SEC5YDR166C 2916 nt2.36□□□□□ -2.03
SMX3P54999 SUL1YBR294W 2580 nt2.36□□□□□ -2.03
SMX3P54999 VPS54YDR027C 2670 nt2.35□□□□□ -2.03
SMX3P54999 GCV2YMR189W 3105 nt2.35□□□□□ -2.03
SMX3P54999 VPS16YPL045W 2397 nt2.35□□□□□ -2.03
SMX3P54999 YGL217CYGL217C 342 nt2.35□□□□□ -2.03
SMX3P54999 INP2YMR163C 2118 nt2.35□□□□□ -2.03
SMX3P54999 RIC1YLR039C 3171 nt2.34□□□□□ -2.03
SMX3P54999 RPL42BYHR141C 321 nt2.34□□□□□ -2.03
SMX3P54999 RPL42AYNL162W 321 nt2.34□□□□□ -2.03
SMX3P54999 YNL205CYNL205C 423 nt2.34□□□□□ -2.03
SMX3P54999 YBR182C-AYBR182C-A 195 nt2.34□□□□□ -2.03
SMX3P54999 VMR1YHL035C 4779 nt2.34□□□□□ -2.03
SMX3P54999 YDR186CYDR186C 2634 nt2.33□□□□□ -2.04
SMX3P54999 MRP10YDL045W-A 288 nt2.33□□□□□ -2.04
SMX3P54999 snR74snR74 88 nt2.33□□□□□ -2.04
SMX3P54999 ACB1YGR037C 264 nt2.33□□□□□ -2.04
SMX3P54999 SNC1YAL030W 354 nt2.33□□□□□ -2.04
SMX3P54999 YOR376WYOR376W 369 nt2.33□□□□□ -2.04
SMX3P54999 YDR239CYDR239C 2364 nt2.33□□□□□ -2.04
SMX3P54999 SIN3YOL004W 4611 nt2.33□□□□□ -2.04
SMX3P54999 SDC25YLL016W 3147 nt2.33□□□□□ -2.04
SMX3P54999 MRD1YPR112C 2664 nt2.32□□□□□ -2.04
SMX3P54999 RPL23BYER117W 414 nt2.32□□□□□ -2.04
SMX3P54999 YNL114CYNL114C 372 nt2.32□□□□□ -2.04
SMX3P54999 YBR131C-AYBR131C-A 90 nt2.32□□□□□ -2.04
SMX3P54999 KAP123YER110C 3342 nt2.32□□□□□ -2.04
SMX3P54999 YIL080WYIL080W 4722 nt2.32□□□□□ -2.04
SMX3P54999 SEC7YDR170C 6030 nt2.32□□□□□ -2.04
SMX3P54999 AFI1YOR129C 2682 nt2.32□□□□□ -2.04
SMX3P54999 STB4YMR019W 2850 nt2.31□□□□□ -2.04
SMX3P54999 MUK1YPL070W 1839 nt2.31□□□□□ -2.04
SMX3P54999 HYP2YEL034W 474 nt2.31□□□□□ -2.04
SMX3P54999 COA4YLR218C 453 nt2.31□□□□□ -2.04
SMX3P54999 RPB10YOR210W 213 nt2.31□□□□□ -2.04
SMX3P54999 BNR1YIL159W 4128 nt2.31□□□□□ -2.04
SMX3P54999 YIL082W-AYIL082W-A 4497 nt2.31□□□□□ -2.04
SMX3P54999 SPO22YIL073C 2928 nt2.31□□□□□ -2.04
SMX3P54999 RRP6YOR001W 2202 nt2.3□□□□□ -2.04
SMX3P54999 SWI6YLR182W 2412 nt2.3□□□□□ -2.04
SMX3P54999 SCH9YHR205W 2475 nt2.3□□□□□ -2.04
SMX3P54999 YNL097C-BYNL097C-B 123 nt2.3□□□□□ -2.04
SMX3P54999 YBL083CYBL083C 426 nt2.3□□□□□ -2.04
SMX3P54999 CRS5YOR031W 210 nt2.3□□□□□ -2.04
SMX3P54999 snR52snR52 92 nt2.3□□□□□ -2.04
SMX3P54999 MNL2YLR057W 2550 nt2.3□□□□□ -2.04
SMX3P54999 TAF2YCR042C 4224 nt2.29□□□□□ -2.04
SMX3P54999 CRM1YGR218W 3255 nt2.29□□□□□ -2.04
SMX3P54999 MPT5YGL178W 2580 nt2.29□□□□□ -2.04
SMX3P54999 RPH1YER169W 2391 nt2.29□□□□□ -2.04
SMX3P54999 snR72snR72 98 nt2.29□□□□□ -2.04
SMX3P54999 YIR030W-AYIR030W-A 384 nt2.29□□□□□ -2.04
SMX3P54999 YOR073W-AYOR073W-A 234 nt2.29□□□□□ -2.04
SMX3P54999 YGR027W-BYGR027W-B 5268 nt2.29□□□□□ -2.04
SMX3P54999 YLR227W-BYLR227W-B 5268 nt2.29□□□□□ -2.04
SMX3P54999 YPR158C-DYPR158C-D 5268 nt2.29□□□□□ -2.04
SMX3P54999 CSF1YLR087C 8877 nt2.29□□□□□ -2.04
SMX3P54999 SWA2YDR320C 2007 nt2.29□□□□□ -2.04
SMX3P54999 PDR1YGL013C 3207 nt2.29□□□□□ -2.04
SMX3P54999 RGA2YDR379W 3030 nt2.28□□□□□ -2.04
SMX3P54999 UTP14YML093W 2700 nt2.28□□□□□ -2.04
SMX3P54999 EMC6YLL014W 327 nt2.28□□□□□ -2.04
SMX3P54999 ACM1YPL267W 630 nt2.28□□□□□ -2.04
SMX3P54999 YPL150WYPL150W 2706 nt2.28□□□□□ -2.04
SMX3P54999 YEL043WYEL043W 2871 nt2.28□□□□□ -2.05
SMX3P54999 SWI5YDR146C 2130 nt2.27□□□□□ -2.05
SMX3P54999 RSE1YML049C 4086 nt2.27□□□□□ -2.05
SMX3P54999 YKU80YMR106C 1890 nt2.27□□□□□ -2.05
SMX3P54999 YGR164WYGR164W 336 nt2.27□□□□□ -2.05
SMX3P54999 APC9YLR102C 798 nt2.27□□□□□ -2.05
SMX3P54999 ARP8YOR141C 2646 nt2.27□□□□□ -2.05
SMX3P54999 NUM1YDR150W 8247 nt2.27□□□□□ -2.05
SMX3P54999 LRE1YCL051W 1752 nt2.26□□□□□ -2.05
SMX3P54999 RFX1YLR176C 2436 nt2.26□□□□□ -2.05
SMX3P54999 SUP56tL(CAA)A 82 nt2.26□□□□□ -2.05
SMX3P54999 SUP53tL(CAA)C 82 nt2.26□□□□□ -2.05
SMX3P54999 tL(CAA)DtL(CAA)D 82 nt2.26□□□□□ -2.05
SMX3P54999 tL(CAA)G1tL(CAA)G1 82 nt2.26□□□□□ -2.05
SMX3P54999 SUP54tL(CAA)G2 82 nt2.26□□□□□ -2.05
SMX3P54999 tL(CAA)G3tL(CAA)G3 82 nt2.26□□□□□ -2.05
SMX3P54999 tL(CAA)KtL(CAA)K 82 nt2.26□□□□□ -2.05
SMX3P54999 tL(CAA)LtL(CAA)L 82 nt2.26□□□□□ -2.05
SMX3P54999 tL(CAA)MtL(CAA)M 82 nt2.26□□□□□ -2.05
SMX3P54999 tL(CAA)NtL(CAA)N 82 nt2.26□□□□□ -2.05
SMX3P54999 YHR073W-AYHR073W-A 177 nt2.26□□□□□ -2.05
SMX3P54999 COX14YML129C 213 nt2.26□□□□□ -2.05
SMX3P54999 YOR394C-AYOR394C-A 168 nt2.26□□□□□ -2.05
SMX3P54999 SGF11YPL047W 300 nt2.26□□□□□ -2.05
SMX3P54999 snR43snR43 209 nt2.26□□□□□ -2.05
SMX3P54999 HOS4YIL112W 3252 nt2.26□□□□□ -2.05
SMX3P54999 snR85snR85 171 nt2.25□□□□□ -2.05
SMX3P54999 YGR050CYGR050C 357 nt2.25□□□□□ -2.05
SMX3P54999 snR46snR46 197 nt2.25□□□□□ -2.05
SMX3P54999 YOL098CYOL098C 3114 nt2.25□□□□□ -2.05
SMX3P54999 PSD2YGR170W 3417 nt2.24□□□□□ -2.05
SMX3P54999 SPF1YEL031W 3648 nt2.24□□□□□ -2.05
SMX3P54999 SGM1YJR134C 2124 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 35.7 ms