Protein–RNA interactions for Protein: P53146

USE1, Protein transport protein USE1, yeastyeast

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USE1P53146 YHR028W-AYHR028W-A 321 nt1.11□□□□□ -2.23
USE1P53146 GMC2YLR445W 567 nt1.11□□□□□ -2.23
USE1P53146 RPS18BYML026C 441 nt1.11□□□□□ -2.23
USE1P53146 YPR146CYPR146C 330 nt1.11□□□□□ -2.23
USE1P53146 KIP1YBL063W 3336 nt1.1□□□□□ -2.23
USE1P53146 NST1YNL091W 3723 nt1.1□□□□□ -2.23
USE1P53146 YHL009W-AYHL009W-A 1242 nt1.1□□□□□ -2.23
USE1P53146 tR(UCU)Q1tR(UCU)Q1 73 nt1.1□□□□□ -2.23
USE1P53146 DDR48YMR173W 1293 nt1.1□□□□□ -2.23
USE1P53146 NOP15YNL110C 663 nt1.1□□□□□ -2.23
USE1P53146 YOR248WYOR248W 303 nt1.1□□□□□ -2.23
USE1P53146 YDL211CYDL211C 1119 nt1.09□□□□□ -2.23
USE1P53146 GAL7YBR018C 1101 nt1.09□□□□□ -2.23
USE1P53146 TIM18YOR297C 579 nt1.09□□□□□ -2.23
USE1P53146 YPR063CYPR063C 423 nt1.09□□□□□ -2.23
USE1P53146 YPR099CYPR099C 357 nt1.09□□□□□ -2.23
USE1P53146 PPN1YDR452W 2025 nt1.08□□□□□ -2.24
USE1P53146 YLR422WYLR422W 5799 nt1.08□□□□□ -2.24
USE1P53146 SEC5YDR166C 2916 nt1.08□□□□□ -2.24
USE1P53146 YGL217CYGL217C 342 nt1.08□□□□□ -2.24
USE1P53146 YKL044WYKL044W 321 nt1.08□□□□□ -2.24
USE1P53146 YOR161W-BYOR161W-B 261 nt1.08□□□□□ -2.24
USE1P53146 NUP188YML103C 4968 nt1.08□□□□□ -2.24
USE1P53146 MUK1YPL070W 1839 nt1.08□□□□□ -2.24
USE1P53146 RAD50YNL250W 3939 nt1.08□□□□□ -2.24
USE1P53146 MSH3YCR092C 3057 nt1.07□□□□□ -2.24
USE1P53146 SPR3YGR059W 1539 nt1.07□□□□□ -2.24
USE1P53146 RPL34BYIL052C 366 nt1.07□□□□□ -2.24
USE1P53146 IRC16YPR038W 360 nt1.07□□□□□ -2.24
USE1P53146 YBR121C-AYBR121C-A 159 nt1.07□□□□□ -2.24
USE1P53146 YOR192C-AYOR192C-A 1317 nt1.07□□□□□ -2.24
USE1P53146 DCP2YNL118C 2913 nt1.07□□□□□ -2.24
USE1P53146 SHE9YDR393W 1371 nt1.07□□□□□ -2.24
USE1P53146 SLX4YLR135W 2247 nt1.07□□□□□ -2.24
USE1P53146 PAN3YKL025C 2040 nt1.06□□□□□ -2.24
USE1P53146 OCA6YDR067C 675 nt1.06□□□□□ -2.24
USE1P53146 BER1YLR412W 825 nt1.06□□□□□ -2.24
USE1P53146 CTK3YML112W 891 nt1.06□□□□□ -2.24
USE1P53146 SWI5YDR146C 2130 nt1.06□□□□□ -2.24
USE1P53146 SGO1YOR073W 1773 nt1.06□□□□□ -2.24
USE1P53146 ROM2YLR371W 4071 nt1.05□□□□□ -2.24
USE1P53146 GUP1YGL084C 1683 nt1.05□□□□□ -2.24
USE1P53146 YDR003W-AYDR003W-A 123 nt1.05□□□□□ -2.24
USE1P53146 YDR509WYDR509W 348 nt1.05□□□□□ -2.24
USE1P53146 PAU2YEL049W 363 nt1.05□□□□□ -2.24
USE1P53146 PRM8YGL053W 714 nt1.05□□□□□ -2.24
USE1P53146 YBL029C-AYBL029C-A 285 nt1.05□□□□□ -2.24
USE1P53146 VAM6YDL077C 3150 nt1.05□□□□□ -2.24
USE1P53146 VPS54YDR027C 2670 nt1.04□□□□□ -2.24
USE1P53146 YEL057CYEL057C 702 nt1.04□□□□□ -2.24
USE1P53146 YJR141WYJR141W 1044 nt1.04□□□□□ -2.24
USE1P53146 YBR032WYBR032W 303 nt1.04□□□□□ -2.24
USE1P53146 YOP1YPR028W 543 nt1.04□□□□□ -2.24
USE1P53146 SCC2YDR180W 4482 nt1.04□□□□□ -2.24
USE1P53146 YLL054CYLL054C 2532 nt1.03□□□□□ -2.24
USE1P53146 YDL016CYDL016C 303 nt1.03□□□□□ -2.24
USE1P53146 YDR008CYDR008C 351 nt1.03□□□□□ -2.24
USE1P53146 RPL9BYNL067W 576 nt1.03□□□□□ -2.24
USE1P53146 SVS1YPL163C 783 nt1.03□□□□□ -2.24
USE1P53146 YPR039WYPR039W 336 nt1.03□□□□□ -2.24
USE1P53146 GDS1YOR355W 1569 nt1.03□□□□□ -2.24
USE1P53146 APL1YJR005W 2103 nt1.03□□□□□ -2.25
USE1P53146 ZIP1YDR285W 2628 nt1.02□□□□□ -2.25
USE1P53146 SWI4YER111C 3282 nt1.02□□□□□ -2.25
USE1P53146 NUT1YGL151W 3399 nt1.02□□□□□ -2.25
USE1P53146 SIP4YJL089W 2490 nt1.02□□□□□ -2.25
USE1P53146 TOF2YKR010C 2316 nt1.02□□□□□ -2.25
USE1P53146 YLL020CYLL020C 306 nt1.02□□□□□ -2.25
USE1P53146 YBR071WYBR071W 636 nt1.02□□□□□ -2.25
USE1P53146 SEC3YER008C 4011 nt1.01□□□□□ -2.25
USE1P53146 SPT7YBR081C 3999 nt1.01□□□□□ -2.25
USE1P53146 RTR1YER139C 681 nt1.01□□□□□ -2.25
USE1P53146 YKL068W-AYKL068W-A 237 nt1.01□□□□□ -2.25
USE1P53146 SRP14YDL092W 441 nt1□□□□□ -2.25
USE1P53146 TMA22YJR014W 597 nt1□□□□□ -2.25
USE1P53146 UBX4YMR067C 1251 nt1□□□□□ -2.25
USE1P53146 YJR029WYJR029W 5268 nt1□□□□□ -2.25
USE1P53146 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
USE1P53146 SPO75YLL005C 2607 nt0.99□□□□□ -2.25
USE1P53146 tV(UAC)BtV(UAC)B 74 nt0.99□□□□□ -2.25
USE1P53146 tV(UAC)DtV(UAC)D 74 nt0.99□□□□□ -2.25
USE1P53146 YKL123WYKL123W 381 nt0.99□□□□□ -2.25
USE1P53146 snR14snR14 160 nt0.99□□□□□ -2.25
USE1P53146 MKT1YNL085W 2493 nt0.98□□□□□ -2.25
USE1P53146 EAF1YDR359C 2949 nt0.98□□□□□ -2.25
USE1P53146 SPT21YMR179W 2277 nt0.98□□□□□ -2.25
USE1P53146 snR84snR84 550 nt0.98□□□□□ -2.25
USE1P53146 SPO23YBR250W 1572 nt0.98□□□□□ -2.25
USE1P53146 SNU56YDR240C 1479 nt0.98□□□□□ -2.25
USE1P53146 CLU1YMR012W 3834 nt0.98□□□□□ -2.25
USE1P53146 CDC39YCR093W 6327 nt0.98□□□□□ -2.25
USE1P53146 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
USE1P53146 APL3YBL037W 3078 nt0.97□□□□□ -2.25
USE1P53146 PIG1YLR273C 1947 nt0.97□□□□□ -2.25
USE1P53146 PIP2YOR363C 2991 nt0.97□□□□□ -2.25
USE1P53146 MET32YDR253C 576 nt0.97□□□□□ -2.25
USE1P53146 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
USE1P53146 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
USE1P53146 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
USE1P53146 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 131.7 ms