Protein–RNA interactions for Protein: P47024

TY4B-J, Transposon Ty4-J Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,803 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-JP47024 ATG16YMR159C 453 nt0.46□□□□□ -2.34
TY4B-JP47024 SEC8YPR055W 3198 nt0.46□□□□□ -2.34
TY4B-JP47024 YDL068WYDL068W 330 nt0.45□□□□□ -2.34
TY4B-JP47024 YDR194W-AYDR194W-A 153 nt0.45□□□□□ -2.34
TY4B-JP47024 YKL183C-AYKL183C-A 213 nt0.45□□□□□ -2.34
TY4B-JP47024 YMR158C-AYMR158C-A 138 nt0.45□□□□□ -2.34
TY4B-JP47024 DDR48YMR173W 1293 nt0.45□□□□□ -2.34
TY4B-JP47024 IRC23YOR044W 474 nt0.45□□□□□ -2.34
TY4B-JP47024 COG8YML071C 1824 nt0.45□□□□□ -2.34
TY4B-JP47024 RTR2YDR066C 591 nt0.45□□□□□ -2.34
TY4B-JP47024 CHZ1YER030W 462 nt0.45□□□□□ -2.34
TY4B-JP47024 YLR163W-AYLR163W-A 114 nt0.45□□□□□ -2.34
TY4B-JP47024 YOR105WYOR105W 327 nt0.45□□□□□ -2.34
TY4B-JP47024 KAR3YPR141C 2190 nt0.45□□□□□ -2.34
TY4B-JP47024 YLL054CYLL054C 2532 nt0.44□□□□□ -2.34
TY4B-JP47024 RUB1YDR139C 234 nt0.44□□□□□ -2.34
TY4B-JP47024 RMD6YEL072W 696 nt0.44□□□□□ -2.34
TY4B-JP47024 RSM18YER050C 417 nt0.44□□□□□ -2.34
TY4B-JP47024 CRG1YHR209W 876 nt0.44□□□□□ -2.34
TY4B-JP47024 YIR020CYIR020C 303 nt0.44□□□□□ -2.34
TY4B-JP47024 GPX1YKL026C 504 nt0.44□□□□□ -2.34
TY4B-JP47024 YMR075C-AYMR075C-A 366 nt0.44□□□□□ -2.34
TY4B-JP47024 YDR034C-CYDR034C-C 1317 nt0.44□□□□□ -2.34
TY4B-JP47024 YFL002W-BYFL002W-B 1317 nt0.44□□□□□ -2.34
TY4B-JP47024 YGR161W-AYGR161W-A 1317 nt0.44□□□□□ -2.34
TY4B-JP47024 YLR410W-AYLR410W-A 1317 nt0.44□□□□□ -2.34
TY4B-JP47024 YBL100W-AYBL100W-A 1317 nt0.44□□□□□ -2.34
TY4B-JP47024 YOR192C-AYOR192C-A 1317 nt0.44□□□□□ -2.34
TY4B-JP47024 YCL020WYCL020W 1317 nt0.44□□□□□ -2.34
TY4B-JP47024 SGD1YLR336C 2700 nt0.43□□□□□ -2.34
TY4B-JP47024 SMB1YER029C 591 nt0.43□□□□□ -2.34
TY4B-JP47024 YER158W-AYER158W-A 216 nt0.43□□□□□ -2.34
TY4B-JP47024 YNL179CYNL179C 438 nt0.43□□□□□ -2.34
TY4B-JP47024 YML002WYML002W 2214 nt0.43□□□□□ -2.34
TY4B-JP47024 15S_rRNA15S_rRNA 1649 nt0.43□□□□□ -2.34
TY4B-JP47024 SPT21YMR179W 2277 nt0.43□□□□□ -2.34
TY4B-JP47024 RTR1YER139C 681 nt0.43□□□□□ -2.34
TY4B-JP47024 SEC22YLR268W 645 nt0.43□□□□□ -2.34
TY4B-JP47024 WAR1YML076C 2835 nt0.43□□□□□ -2.34
TY4B-JP47024 CSE1YGL238W 2883 nt0.42□□□□□ -2.34
TY4B-JP47024 MPT5YGL178W 2580 nt0.42□□□□□ -2.34
TY4B-JP47024 RIM20YOR275C 1986 nt0.42□□□□□ -2.34
TY4B-JP47024 YGL109WYGL109W 324 nt0.42□□□□□ -2.34
TY4B-JP47024 IES4YOR189W 351 nt0.42□□□□□ -2.34
TY4B-JP47024 NUT1YGL151W 3399 nt0.42□□□□□ -2.34
TY4B-JP47024 YDR003W-AYDR003W-A 123 nt0.41□□□□□ -2.34
TY4B-JP47024 VMA7YGR020C 357 nt0.41□□□□□ -2.34
TY4B-JP47024 SVP26YHR181W 687 nt0.41□□□□□ -2.34
TY4B-JP47024 NUP82YJL061W 2142 nt0.4□□□□□ -2.35
TY4B-JP47024 DPB11YJL090C 2295 nt0.4□□□□□ -2.35
TY4B-JP47024 YDL196WYDL196W 330 nt0.4□□□□□ -2.35
TY4B-JP47024 IES5YER092W 378 nt0.4□□□□□ -2.35
TY4B-JP47024 ARV1YLR242C 966 nt0.4□□□□□ -2.35
TY4B-JP47024 SWT1YOR166C 1377 nt0.4□□□□□ -2.35
TY4B-JP47024 IRC2YDR112W 309 nt0.39□□□□□ -2.35
TY4B-JP47024 ECM12YHR021W-A 456 nt0.39□□□□□ -2.35
TY4B-JP47024 YBR012CYBR012C 420 nt0.39□□□□□ -2.35
TY4B-JP47024 TOF2YKR010C 2316 nt0.39□□□□□ -2.35
TY4B-JP47024 RPL29YFR032C-A 180 nt0.38□□□□□ -2.35
TY4B-JP47024 RPL42BYHR141C 321 nt0.38□□□□□ -2.35
TY4B-JP47024 HYM1YKL189W 1200 nt0.38□□□□□ -2.35
TY4B-JP47024 CMS1YLR003C 876 nt0.38□□□□□ -2.35
TY4B-JP47024 RPL42AYNL162W 321 nt0.38□□□□□ -2.35
TY4B-JP47024 YPL080CYPL080C 327 nt0.38□□□□□ -2.35
TY4B-JP47024 YPR159C-AYPR159C-A 102 nt0.38□□□□□ -2.35
TY4B-JP47024 YPR172WYPR172W 603 nt0.38□□□□□ -2.35
TY4B-JP47024 NOC3YLR002C 1992 nt0.38□□□□□ -2.35
TY4B-JP47024 YDR509WYDR509W 348 nt0.38□□□□□ -2.35
TY4B-JP47024 UFE1YOR075W 1041 nt0.38□□□□□ -2.35
TY4B-JP47024 YLL007CYLL007C 1998 nt0.37□□□□□ -2.35
TY4B-JP47024 DAD1YDR016C 285 nt0.37□□□□□ -2.35
TY4B-JP47024 MXR1YER042W 555 nt0.37□□□□□ -2.35
TY4B-JP47024 YGR265WYGR265W 411 nt0.37□□□□□ -2.35
TY4B-JP47024 RPL38YLR325C 237 nt0.37□□□□□ -2.35
TY4B-JP47024 HDA3YPR179C 1968 nt0.37□□□□□ -2.35
TY4B-JP47024 snR59snR59 78 nt0.36□□□□□ -2.35
TY4B-JP47024 COX3Q0275 810 nt0.36□□□□□ -2.35
TY4B-JP47024 IRC13YOR235W 315 nt0.36□□□□□ -2.35
TY4B-JP47024 SPR2YOR214C 711 nt0.36□□□□□ -2.35
TY4B-JP47024 SCW11YGL028C 1629 nt0.35□□□□□ -2.35
TY4B-JP47024 VPS74YDR372C 1038 nt0.35□□□□□ -2.35
TY4B-JP47024 RPS30AYLR287C-A 192 nt0.35□□□□□ -2.35
TY4B-JP47024 NBP1YLR457C 960 nt0.35□□□□□ -2.35
TY4B-JP47024 YBR063CYBR063C 1215 nt0.35□□□□□ -2.35
TY4B-JP47024 HNT1YDL125C 477 nt0.34□□□□□ -2.36
TY4B-JP47024 YDR114CYDR114C 303 nt0.34□□□□□ -2.36
TY4B-JP47024 GIM5YML094W 492 nt0.34□□□□□ -2.36
TY4B-JP47024 RUF22RUF22 515 nt0.34□□□□□ -2.36
TY4B-JP47024 SWF1YDR126W 1011 nt0.33□□□□□ -2.36
TY4B-JP47024 SRB7YDR308C 423 nt0.33□□□□□ -2.36
TY4B-JP47024 DFG10YIL049W 762 nt0.33□□□□□ -2.36
TY4B-JP47024 YPL119C-AYPL119C-A 264 nt0.33□□□□□ -2.36
TY4B-JP47024 NUT2YPR168W 474 nt0.33□□□□□ -2.36
TY4B-JP47024 SWI5YDR146C 2130 nt0.33□□□□□ -2.36
TY4B-JP47024 MET32YDR253C 576 nt0.32□□□□□ -2.36
TY4B-JP47024 YER038W-AYER038W-A 381 nt0.32□□□□□ -2.36
TY4B-JP47024 YOR282WYOR282W 321 nt0.32□□□□□ -2.36
TY4B-JP47024 YOR366WYOR366W 354 nt0.32□□□□□ -2.36
TY4B-JP47024 AIM44YPL158C 2277 nt0.32□□□□□ -2.36
TY4B-JP47024 REF2YDR195W 1602 nt0.32□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms